RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 HOXD13P35453 343 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 KRT17Q04695 432 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 UBE3AQ05086 875 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 TUSC3Q13454 348 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 ADGRE1Q14246 886 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 PTPROQ16827 1216 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 KNOP1Q1ED39 458 aaKnown RBP11.8□□□□□ -0.52
ATG4B-219ENST00000479941 SLC10A6Q3KNW5 377 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 SEZ6Q53EL9 994 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 ARMCX5Q6P1M9 558 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 HS2ST1Q7LGA3 356 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 CD302Q8IX05 232 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 NELFCDQ8IXH7 590 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 COLGALT2Q8IYK4 626 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 SLC39A11Q8N1S5 342 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 SPATA20Q8TB22 786 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 GOLGA5Q8TBA6 731 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 SMARCE1Q969G3 411 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 TMEM169Q96HH4 297 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 SNX27Q96L92 541 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 TSPAN18Q96SJ8 248 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 IKZF4Q9H2S9 585 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 RPF1Q9H9Y2 349 aaKnown RBP11.8□□□□□ -0.52
ATG4B-219ENST00000479941 ALG13Q9NP73 1137 aaKnown RBP11.8□□□□□ -0.52
ATG4B-219ENST00000479941 LMBRD1Q9NUN5 540 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 SLC38A7Q9NVC3 462 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 CNTN3Q9P232 1028 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 DNAJB4Q9UDY4 337 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 STK39Q9UEW8 545 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 PUF60Q9UHX1 559 aaKnown RBP11.8□□□□□ -0.52
ATG4B-219ENST00000479941 CPSF3Q9UKF6 684 aaKnown RBP11.8□□□□□ -0.52
ATG4B-219ENST00000479941 LZTS1Q9Y250 596 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 FAN1Q9Y2M0 1017 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 PCDHA5Q9Y5H7 936 aa11.8□□□□□ -0.52
ATG4B-219ENST00000479941 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-219ENST00000479941 SPTBN5Q9NRC6 3674 aaKnown RBP11.8□□□□□ -0.52
ATG4B-219ENST00000479941 EYSQ5T1H1 3165 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 TTC26A0AVF1 554 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 NRP1O14786 923 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 TGFB1I1O43294 461 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 B4GALT3O60512 393 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 ADRB2P07550 413 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 CXCL8P10145 99 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 IGFBP4P22692 258 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 PBX3P40426 434 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 TNFSF9P41273 254 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 OR1G1P47890 313 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 SLC11A1P49279 550 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 PPP2R3AQ06190 1150 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 NAB2Q15742 525 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 GLRA4Q5JXX5 417 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 SPPL3Q8TCT6 385 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 MRPL38Q96DV4 380 aaKnown RBP11.79□□□□□ -0.52
ATG4B-219ENST00000479941 IGSF21Q96ID5 467 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 PPP1R10Q96QC0 940 aaKnown RBP11.79□□□□□ -0.52
ATG4B-219ENST00000479941 CBWD1Q9BRT8 395 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 ASB7Q9H672 318 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 AGPAT3Q9NRZ7 376 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 STXBP5LQ9Y2K9 1186 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 MTCH2Q9Y6C9 303 aa11.79□□□□□ -0.52
ATG4B-219ENST00000479941 NT5C1B-RDH14C9J2C7 533 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 PDXKO00764 312 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 GRM6O15303 877 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 MEFVO15553 781 aaPredicted RBP11.78□□□□□ -0.52
ATG4B-219ENST00000479941 EXTL3O43909 919 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 ACOT2P49753 483 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 HSP90AA2PQ14568 343 aaPredicted RBP11.78□□□□□ -0.52
ATG4B-219ENST00000479941 ENOX2Q16206 610 aaKnown RBP11.78□□□□□ -0.52
ATG4B-219ENST00000479941 ZBTB41Q5SVQ8 909 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 ZNF658Q5TYW1 1059 aaPredicted RBP11.78□□□□□ -0.52
ATG4B-219ENST00000479941 C12orf56Q8IXR9 622 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 GPD1LQ8N335 351 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 GUF1Q8N442 669 aaKnown RBP11.78□□□□□ -0.52
ATG4B-219ENST00000479941 POF1BQ8WVV4 589 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 UROC1Q96N76 676 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 ZMAT2Q96NC0 199 aaKnown RBP11.78□□□□□ -0.52
ATG4B-219ENST00000479941 COLEC11Q9BWP8 271 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 CXCL16Q9H2A7 254 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 PCIF1Q9H4Z3 704 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 KIAA1586Q9HCI6 787 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 HSPBP1Q9NZL4 362 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 KIAA1671Q9BY89 1806 aa11.78□□□□□ -0.52
ATG4B-219ENST00000479941 TDRD15B5MCY1 1934 aaKnown RBP11.78□□□□□ -0.52
ATG4B-219ENST00000479941 PRRC2BQ5JSZ5 2229 aaKnown RBP11.78□□□□□ -0.52
ATG4B-219ENST00000479941 PRUNE2Q8WUY3 3088 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 CASTOR2A6NHX0 329 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 LACTBL1A8MY62 500 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 CLIC2O15247 247 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 XPOTO43592 962 aaKnown RBP11.77□□□□□ -0.53
ATG4B-219ENST00000479941 IL18RAPO95256 599 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 CYP3A5P20815 502 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 CAMK1Q14012 370 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 COBLL1Q53SF7 1204 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 PDE12Q6L8Q7 609 aaKnown RBP11.77□□□□□ -0.53
ATG4B-219ENST00000479941 CRELD2Q6UXH1 353 aaPredicted RBP11.77□□□□□ -0.53
ATG4B-219ENST00000479941 DDX53Q86TM3 631 aaKnown RBP11.77□□□□□ -0.53
ATG4B-219ENST00000479941 TMEM173Q86WV6 379 aaPredicted RBP11.77□□□□□ -0.53
ATG4B-219ENST00000479941 BRSK2Q8IWQ3 736 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 XXYLT1Q8NBI6 393 aa11.77□□□□□ -0.53
ATG4B-219ENST00000479941 TMEM174Q8WUU8 243 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms