RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 LRFN3Q9BTN0 628 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 MTFR1LQ9H019 292 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 EDARQ9UNE0 448 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 INSL6Q9Y581 213 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 COL4A3BPQ9Y5P4 624 aa4.96□□□□□ -1.62
CMSS1-204ENST00000479555 SMG6Q86US8 1419 aaKnown RBP4.96□□□□□ -1.62
CMSS1-204ENST00000479555 SMARCA4P51532 1647 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 hCG_2014768A0A024R1R8 64 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 MARCH11A6NNE9 402 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 WNT10BO00744 389 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 MGST3O14880 152 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 ITGA10O75578 1167 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 CDK11BP21127 795 aaKnown RBP4.95□□□□□ -1.62
CMSS1-204ENST00000479555 MPLP40238 635 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 SCNN1BP51168 640 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 CHN2P52757 468 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 IGBP1P78318 339 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 BECN1Q14457 450 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 MFSD14BQ5SR56 506 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 ZNF362Q5T0B9 420 aaPredicted RBP4.95□□□□□ -1.62
CMSS1-204ENST00000479555 PAPD7Q5XG87 772 aaKnown RBP4.95□□□□□ -1.62
CMSS1-204ENST00000479555 EFCAB12Q6NXP0 572 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 ANKRD13AQ8IZ07 590 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 FBXO18Q8NFZ0 1043 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 OR2W6PQ8NHA6 318 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 SLC35B2Q8TB61 432 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 LEO1Q8WVC0 666 aaPredicted RBP4.95□□□□□ -1.62
CMSS1-204ENST00000479555 FRAT1Q92837 279 aaPredicted RBP4.95□□□□□ -1.62
CMSS1-204ENST00000479555 ORAI3Q9BRQ5 295 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.95□□□□□ -1.62
CMSS1-204ENST00000479555 SPTLC3Q9NUV7 552 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 MCM8Q9UJA3 840 aa4.95□□□□□ -1.62
CMSS1-204ENST00000479555 LETM1O95202 739 aaPredicted RBP4.94□□□□□ -1.62
CMSS1-204ENST00000479555 EGR2P11161 476 aaPredicted RBP4.94□□□□□ -1.62
CMSS1-204ENST00000479555 XPAP23025 273 aaPredicted RBP4.94□□□□□ -1.62
CMSS1-204ENST00000479555 OCRLQ01968 901 aa4.94□□□□□ -1.62
CMSS1-204ENST00000479555 SCAPQ12770 1279 aa4.94□□□□□ -1.62
CMSS1-204ENST00000479555 DDX10Q13206 875 aaKnown RBP4.94□□□□□ -1.62
CMSS1-204ENST00000479555 PCBP1Q15365 356 aaKnown RBP eCLIP4.94□□□□□ -1.62
CMSS1-204ENST00000479555 DHCR24Q15392 516 aa4.94□□□□□ -1.62
CMSS1-204ENST00000479555 PRAMEF14Q5SWL7 426 aa4.94□□□□□ -1.62
CMSS1-204ENST00000479555 RNF180Q86T96 592 aa4.94□□□□□ -1.62
CMSS1-204ENST00000479555 REPS2Q8NFH8 660 aa4.94□□□□□ -1.62
CMSS1-204ENST00000479555 COQ10AQ96MF6 247 aa4.94□□□□□ -1.62
CMSS1-204ENST00000479555 PUS7Q96PZ0 661 aaKnown RBP4.94□□□□□ -1.62
CMSS1-204ENST00000479555 GTPBP4Q9BZE4 634 aaKnown RBP4.94□□□□□ -1.62
CMSS1-204ENST00000479555 TSPYL1Q9H0U9 437 aa4.94□□□□□ -1.62
CMSS1-204ENST00000479555 PCDH12Q9NPG4 1184 aa4.94□□□□□ -1.62
CMSS1-204ENST00000479555 CCDC144AA2RUR9 1427 aa4.94□□□□□ -1.62
CMSS1-204ENST00000479555 CLIP1P30622 1438 aa4.94□□□□□ -1.62
CMSS1-204ENST00000479555 RRBP1Q9P2E9 1410 aaKnown RBP4.94□□□□□ -1.62
CMSS1-204ENST00000479555 MROH2BQ7Z745 1585 aa4.94□□□□□ -1.62
CMSS1-204ENST00000479555 KIF21BO75037 1637 aa4.94□□□□□ -1.62
CMSS1-204ENST00000479555 TBKBP1A7MCY6 615 aa4.93□□□□□ -1.62
CMSS1-204ENST00000479555 INO80B-WBP1J3KQ70 363 aa4.93□□□□□ -1.62
CMSS1-204ENST00000479555 NRP2O60462 931 aa4.93□□□□□ -1.62
CMSS1-204ENST00000479555 ELANEP08246 267 aa4.93□□□□□ -1.62
CMSS1-204ENST00000479555 LTA4HP09960 611 aaKnown RBP4.93□□□□□ -1.62
CMSS1-204ENST00000479555 KPNA1P52294 538 aaPredicted RBP4.93□□□□□ -1.62
CMSS1-204ENST00000479555 MANFP55145 182 aaKnown RBP4.93□□□□□ -1.62
CMSS1-204ENST00000479555 NRG3P56975 720 aa4.93□□□□□ -1.62
CMSS1-204ENST00000479555 SEPT7Q16181 437 aaKnown RBP4.93□□□□□ -1.62
CMSS1-204ENST00000479555 GPR158Q5T848 1215 aa4.93□□□□□ -1.62
CMSS1-204ENST00000479555 DRICH1Q6PGQ1 229 aaPredicted RBP4.93□□□□□ -1.62
CMSS1-204ENST00000479555 SLC41A1Q8IVJ1 513 aa4.93□□□□□ -1.62
CMSS1-204ENST00000479555 USP7Q93009 1102 aa4.93□□□□□ -1.62
CMSS1-204ENST00000479555 ZSWIM1Q9BR11 485 aa4.93□□□□□ -1.62
CMSS1-204ENST00000479555 INO80BQ9C086 356 aaPredicted RBP4.93□□□□□ -1.62
CMSS1-204ENST00000479555 RNF181Q9P0P0 153 aa4.93□□□□□ -1.62
CMSS1-204ENST00000479555 PRSS50Q9UI38 385 aa4.93□□□□□ -1.62
CMSS1-204ENST00000479555 FRMD4BQ9Y2L6 1034 aa4.93□□□□□ -1.62
CMSS1-204ENST00000479555 FPGT-TNNI3KV9GXZ4 949 aa4.93□□□□□ -1.62
CMSS1-204ENST00000479555 RNF123Q5XPI4 1314 aa4.93□□□□□ -1.62
CMSS1-204ENST00000479555 WIZO95785 1651 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 PEG3Q9GZU2 1588 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 BAZ1AQ9NRL2 1556 aaPredicted RBP4.92□□□□□ -1.62
CMSS1-204ENST00000479555 CCDC78A2IDD5 438 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 B5MCH6 92 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 BRINP1O60477 761 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 MATN4O95460 622 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 ESRRBO95718 433 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 ERBB2P04626 1255 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 LPLP06858 475 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 RBP3P10745 1247 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 MPP3Q13368 585 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 BMT2Q1RMZ1 405 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 ABHD17BQ5VST6 288 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 GPR149Q86SP6 731 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 C11orf74Q86VG3 221 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 PASD1Q8IV76 773 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 GLB1L2Q8IW92 636 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 FTSJ3Q8IY81 847 aaKnown RBP4.92□□□□□ -1.62
CMSS1-204ENST00000479555 SMC1BQ8NDV3 1235 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 Q96MF0 132 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 TTC1Q99614 292 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 SPATA5L1Q9BVQ7 753 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 GPRC5DQ9NZD1 345 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 TLK1Q9UKI8 766 aa4.92□□□□□ -1.62
CMSS1-204ENST00000479555 NAP1L2Q9ULW6 460 aaPredicted RBP4.92□□□□□ -1.62
CMSS1-204ENST00000479555 DIRC3C9JPN6 131 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 540.5 ms