RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 EIF2AK2P19525 551 aaKnown RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 ACTN2P35609 894 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 PHKA1P46020 1223 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 UBXN2AP68543 259 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 FMO1Q01740 532 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 UBXN1Q04323 297 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 KIAA2012Q0VF49 1180 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 SCRN1Q12765 414 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 KCNAB2Q13303 367 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 TMED1Q13445 227 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 PRPF4BQ13523 1007 aaKnown RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 PMS2P11Q13670 270 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 ERV3-1Q14264 604 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 RASA2Q15283 850 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 DLGAP5Q15398 846 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 TAF7Q15545 349 aaPredicted RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 CNGA2Q16280 664 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 SLC35G1Q2M3R5 365 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 PLA2G2CQ5R387 149 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 ARMC4Q5T2S8 1044 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 MBNL2Q5VZF2 373 aaKnown RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 TRIM68Q6AZZ1 485 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 DENND5AQ6IQ26 1287 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 NAA16Q6N069 864 aaPredicted RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 CYP4F22Q6NT55 531 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 JMJD6Q6NYC1 403 aaPredicted RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 CNKSR3Q6P9H4 555 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 NFXL1Q6ZNB6 911 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 HFE2Q6ZVN8 426 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 B4GALNT4Q76KP1 1039 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 KCNK18Q7Z418 384 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 C2CD5Q86YS7 1000 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 LIX1LQ8IVB5 337 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 NGEFQ8N5V2 710 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 MEIOBQ8N635 442 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 TMCO5AQ8N6Q1 288 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 PPM1NQ8N819 430 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 RNF152Q8N8N0 203 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 FANCBQ8NB91 859 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 FNIP1Q8TF40 1166 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 AUTS2Q8WXX7 1259 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 COPS5Q92905 334 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 SDCCAG3Q96C92 435 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 MAML3Q96JK9 1138 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 FEM1CQ96JP0 617 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 HEPHQ9BQS7 1158 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 PDCD2LQ9BRP1 358 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 BRIP1Q9BX63 1249 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 PAIP1Q9H074 479 aaKnown RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 C2orf40Q9H1Z8 148 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 OR10A4Q9H209 315 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 CHMP4BQ9H444 224 aaKnown RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 SYNCQ9H7C4 482 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 ZFAND3Q9H8U3 227 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 POGKQ9P215 609 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 CPSF2Q9P2I0 782 aaKnown RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 MYO1AQ9UBC5 1043 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 TBC1D29Q9UFV1 150 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 SERPINB13Q9UIV8 391 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 TUBD1Q9UJT1 453 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 ARHGAP26Q9UNA1 814 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 RRP15Q9Y3B9 282 aaKnown RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 ZNF711Q9Y462 761 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 ATP6V0A2Q9Y487 856 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 SNX8Q9Y5X2 465 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 ST14Q9Y5Y6 855 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 CFAP20Q9Y6A4 193 aaKnown RBP3.2□□□□□ -1.9
HMGN4-202ENST00000477243 CROCC2H7BZ55 1655 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 C3P01024 1663 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 DNHD1Q96M86 4753 aa3.2□□□□□ -1.9
HMGN4-202ENST00000477243 NPHP4O75161 1426 aaPredicted RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 TRBV23OR9-2A0A075B6M9 112 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 C17orf113A0A1B0GUU1 675 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 A0A1W2PPL8 197 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 ZBTB42B2RXF5 422 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 H0Y3Z8 333 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 H0Y626 953 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 GTPBP1O00178 669 aaKnown RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 CA12O43570 354 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 AOC2O75106 756 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 FAM155BO75949 473 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 SCGB1D1O95968 90 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 QDPRP09417 244 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 ACADMP11310 421 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 KRT10P13645 584 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 HNRNPLP14866 589 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 PAMP19021 973 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 IL11P20809 199 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 MAOBP27338 520 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 HNF4AP41235 474 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 WASP42768 502 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 AFF1P51825 1210 aaKnown RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 KIF11P52732 1056 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 CSE1LP55060 971 aaKnown RBP3.19□□□□□ -1.9
HMGN4-202ENST00000477243 UBASH3AP57075 661 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 RAB1AP62820 205 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 IRF9Q00978 393 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 CREMQ03060 361 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 TNP2Q05952 138 aa3.19□□□□□ -1.9
HMGN4-202ENST00000477243 CHRNDQ07001 517 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms