RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 CELF5Q8N6W0 485 aaKnown RBP7.47□□□□□ -1.21
VPS50-212ENST00000476413 FAM167AQ96KS9 214 aa7.47□□□□□ -1.21
VPS50-212ENST00000476413 RPL10LQ96L21 214 aaKnown RBP7.47□□□□□ -1.21
VPS50-212ENST00000476413 PNPOQ9NVS9 261 aa7.47□□□□□ -1.21
VPS50-212ENST00000476413 FNIP2Q9P278 1114 aa7.47□□□□□ -1.21
VPS50-212ENST00000476413 SLC4A7Q9Y6M7 1214 aa7.47□□□□□ -1.21
VPS50-212ENST00000476413 ZMYM3Q14202 1370 aa7.46□□□□□ -1.21
VPS50-212ENST00000476413 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.46□□□□□ -1.22
VPS50-212ENST00000476413 H3BUI4 141 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 B4GALT3O60512 393 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 ARIH2O95376 493 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 MYF5P13349 255 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 ALDH1A3P47895 512 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 SP140Q13342 867 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 OS9Q13438 667 aaPredicted RBP7.46□□□□□ -1.22
VPS50-212ENST00000476413 POLD3Q15054 466 aaPredicted RBP7.46□□□□□ -1.22
VPS50-212ENST00000476413 OGFOD2Q6N063 350 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 TOGARAM2Q6ZUX3 1019 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 PPP1R3BQ86XI6 285 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 FAM90A1Q86YD7 464 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 KBTBD2Q8IY47 623 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 CMTM4Q8IZR5 234 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 IL31RAQ8NI17 732 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 RABGGTAQ92696 567 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 POLR3GLQ9BT43 218 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 KRTAP9-2Q9BYQ4 174 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 TMEM140Q9NV12 185 aa7.46□□□□□ -1.22
VPS50-212ENST00000476413 MROH6A6NGR9 719 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 F2RL2O00254 374 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 NRP1O14786 923 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 PRDX5P30044 214 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 PTPN7P35236 360 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 PIK3CBP42338 1070 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 AK2P54819 239 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 SLURP1P55000 103 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 LONRF1Q17RB8 773 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 C10orf62Q5T681 223 aaPredicted RBP7.45□□□□□ -1.22
VPS50-212ENST00000476413 AFMIDQ63HM1 303 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 GADL1Q6ZQY3 521 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 PLXDC1Q8IUK5 500 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 SMC5Q8IY18 1101 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 SH2D3CQ8N5H7 860 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 APIPQ96GX9 242 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 MRGPRX1Q96LB2 322 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 ARPC5LQ9BPX5 153 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 AGO3Q9H9G7 860 aaKnown RBP7.45□□□□□ -1.22
VPS50-212ENST00000476413 RTEL1Q9NZ71 1219 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 SLC23A1Q9UHI7 598 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 NR2E1Q9Y466 385 aa7.45□□□□□ -1.22
VPS50-212ENST00000476413 PMS2P1A4D2B8 440 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 NPIPB6E9PJ23 425 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 MYO1FO00160 1098 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 PHGDHO43175 533 aaKnown RBP7.44□□□□□ -1.22
VPS50-212ENST00000476413 CNOT4O95628 575 aaKnown RBP7.44□□□□□ -1.22
VPS50-212ENST00000476413 IL2RBP14784 551 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 NPR1P16066 1061 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 FLYWCH1Q4VC44 716 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 KRT40Q6A162 431 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 XRRA1Q6P2D8 792 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 SRLQ86TD4 932 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 POU5F2Q8N7G0 328 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 MTFMTQ96DP5 389 aaKnown RBP7.44□□□□□ -1.22
VPS50-212ENST00000476413 TBCBQ99426 244 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 CDC5LQ99459 802 aaKnown RBP7.44□□□□□ -1.22
VPS50-212ENST00000476413 MRPL46Q9H2W6 279 aaKnown RBP7.44□□□□□ -1.22
VPS50-212ENST00000476413 MYH16Q9H6N6 1097 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 WDCPQ9H6R7 721 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 IL23AQ9NPF7 189 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 RUVBL1Q9Y265 456 aaKnown RBP7.44□□□□□ -1.22
VPS50-212ENST00000476413 DAAM1Q9Y4D1 1078 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 USP19O94966 1318 aa7.44□□□□□ -1.22
VPS50-212ENST00000476413 SLC26A4O43511 780 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 NOBOXO60393 691 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 EIF3JO75822 258 aaKnown RBP7.43□□□□□ -1.22
VPS50-212ENST00000476413 SASH1O94885 1247 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 SBK3P0C264 359 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 FTH1P19P0C7X4 201 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 PRIM2P49643 509 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 FLT3LGP49771 235 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 MRPL49Q13405 166 aaKnown RBP7.43□□□□□ -1.22
VPS50-212ENST00000476413 FAM47AQ5JRC9 791 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 GORABQ5T7V8 394 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 OTUD7BQ6GQQ9 843 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 OR5M3Q8NGP4 307 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 PHKBQ93100 1093 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 MYOCQ99972 504 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 C1orf43Q9BWL3 253 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 BTBD1Q9H0C5 482 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 NUP62CLQ9H1M0 184 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 FEZ2Q9UHY8 353 aaPredicted RBP7.43□□□□□ -1.22
VPS50-212ENST00000476413 PCDHA1Q9Y5I3 950 aa7.43□□□□□ -1.22
VPS50-212ENST00000476413 ADAMTS20P59510 1910 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 KRTAP9-6A0A140TA67 174 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 MGEA5O60502 916 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 STC2O76061 302 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 CD1AP06126 327 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 GZMKP49863 264 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 CASP5P51878 434 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 APBA1Q02410 837 aa7.42□□□□□ -1.22
VPS50-212ENST00000476413 RIN1Q13671 783 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms