RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 TCF3P15923 654 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 GM2AP17900 193 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 PIK3CAP42336 1068 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 TECP42680 631 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 PEX5P50542 639 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 IFI35P80217 286 aaPredicted RBP12.18□□□□□ -0.46
U2AF1-209ENST00000475639 PABPC4Q13310 644 aaKnown RBP eCLIP12.18□□□□□ -0.46
U2AF1-209ENST00000475639 TEKT3Q9BXF9 490 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 EPB41L4BQ9H329 900 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 MMADHCQ9H3L0 296 aaPredicted RBP12.18□□□□□ -0.46
U2AF1-209ENST00000475639 MAGEF1Q9HAY2 307 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 BCL9O00512 1426 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 SYNDIG1LA6NDD5 238 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 STAT2P52630 851 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 MED21Q13503 144 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 HGSNATQ68CP4 663 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 ANKRD40Q6AI12 368 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 ACAD11Q709F0 780 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 CDR2LQ86X02 465 aaPredicted RBP12.18□□□□□ -0.46
U2AF1-209ENST00000475639 ENAHQ8N8S7 591 aaPredicted RBP12.18□□□□□ -0.46
U2AF1-209ENST00000475639 GIMAP8Q8ND71 665 aaPredicted RBP12.18□□□□□ -0.46
U2AF1-209ENST00000475639 BAP1Q92560 729 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 FAM136AQ96C01 138 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 OLFM3Q96PB7 478 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 TRPV6Q9H1D0 765 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 RUBCNLQ9H714 662 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 PAIP2BQ9ULR5 123 aaKnown RBP12.18□□□□□ -0.46
U2AF1-209ENST00000475639 PHF24Q9UPV7 400 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 ATP11BQ9Y2G3 1177 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 LRP6O75581 1613 aa12.18□□□□□ -0.46
U2AF1-209ENST00000475639 MARF1Q9Y4F3 1742 aaKnown RBP12.18□□□□□ -0.46
U2AF1-209ENST00000475639 DNAJC6O75061 913 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 KRT38O76015 456 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 ZBED1O96006 694 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 TTC23LQ6PF05 361 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 DPP8Q6V1X1 898 aaPredicted RBP12.17□□□□□ -0.46
U2AF1-209ENST00000475639 MAPKAPK5Q8IW41 473 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 AS3MTQ9HBK9 375 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 AMACRQ9UHK6 382 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 GSNP06396 782 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 ACADSP16219 412 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 FKBP3Q00688 224 aaKnown RBP12.17□□□□□ -0.46
U2AF1-209ENST00000475639 PRKG1Q13976 671 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 NAB2Q15742 525 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 SUPT20HQ8NEM7 779 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 SLC7A3Q8WY07 619 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 ALKBH8Q96BT7 664 aaKnown RBP12.17□□□□□ -0.46
U2AF1-209ENST00000475639 PHF20Q9BVI0 1012 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 PUS3Q9BZE2 481 aaKnown RBP12.17□□□□□ -0.46
U2AF1-209ENST00000475639 TMEM245Q9H330 911 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 TMEM165Q9HC07 324 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 SPATA31A3Q5VYP0 1347 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 PDE8AO60658 829 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 WDR47O94967 919 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 KRT1P04264 644 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 POLR2MP0CAP2 368 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 RNF139Q8WU17 664 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 THAP11Q96EK4 314 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 DTNBP1Q96EV8 351 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 TXLNGYQ9BZA5 131 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 KLC2Q9H0B6 622 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 SNX25Q9H3E2 840 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 ARHGAP23Q9P227 1491 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 KPNA7A9QM74 516 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 RBAK-RBAKDNI3L0D1 243 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 CCNB1P14635 433 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 NAALADL2Q58DX5 795 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 STK32AQ8WU08 396 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 OPTNQ96CV9 577 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 EDEM3Q9BZQ6 932 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 ZWILCHQ9H900 591 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 PCDHGB4Q9UN71 923 aa12.17□□□□□ -0.46
U2AF1-209ENST00000475639 PSMA3P25788 255 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 ABCD1P33897 745 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 TCP10Q12799 353 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 C7orf31Q8N865 590 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 ANKLE1Q8NAG6 615 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 PGM2Q96G03 612 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 TRAPPC9Q96Q05 1148 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 E7ENQ6 273 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 COPEO14579 308 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 PRPSAP2O60256 369 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 NR2F2P24468 414 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 RECQLP46063 649 aaPredicted RBP12.16□□□□□ -0.46
U2AF1-209ENST00000475639 IGBP1P78318 339 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 MYL7Q01449 175 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 LRP10Q7Z4F1 713 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 CUEDC2Q9H467 287 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.16□□□□□ -0.46
U2AF1-209ENST00000475639 C5P01031 1676 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 A0A0G2JND7 137 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 GOLGA8MH3BSY2 632 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 RHOBTB3O94955 611 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 MAGEA10P43363 369 aaPredicted RBP12.16□□□□□ -0.46
U2AF1-209ENST00000475639 PTDSS1P48651 473 aaKnown RBP12.16□□□□□ -0.46
U2AF1-209ENST00000475639 PKN1Q16512 942 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 FAM160B1Q5W0V3 765 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 TBC1D16Q8TBP0 767 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 ASAP3Q8TDY4 903 aa12.16□□□□□ -0.46
U2AF1-209ENST00000475639 ANKRD36BP1Q96IX9 119 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms