RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 PDLIM1O00151 329 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 EXOC3O60645 756 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 PCK1P35558 622 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 SOX5P35711 763 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 RFC5P40937 340 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 GALCP54803 685 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 PADI6Q6TGC4 694 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 FAM160B2Q86V87 743 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 PALB2Q86YC2 1186 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 METTL13Q8N6R0 699 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 SLC17A8Q8NDX2 589 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 KIFAP3Q92845 792 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 INTS2Q9H0H0 1204 aaKnown RBP13.91□□□□□ -0.18
CCNL1-216ENST00000475298 EHMT1Q9H9B1 1298 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.91□□□□□ -0.182e-15■■■■■ 107.2
CCNL1-216ENST00000475298 DMAC2Q9NW81 257 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 FEM1BQ9UK73 627 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 SMAPO00193 183 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 ZBTB48P10074 688 aaPredicted RBP13.9□□□□□ -0.18
CCNL1-216ENST00000475298 ABCB4P21439 1286 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 MTA1Q13330 715 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 MIER3Q7Z3K6 550 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 SDCCAG8Q86SQ7 713 aaPredicted RBP13.9□□□□□ -0.18
CCNL1-216ENST00000475298 VPS36Q86VN1 386 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 TTLL6Q8N841 843 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 SEC14L1Q92503 715 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 DDX47Q9H0S4 455 aaKnown RBP13.9□□□□□ -0.18
CCNL1-216ENST00000475298 OCEL1Q9H607 264 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 INTS9Q9NV88 658 aaKnown RBP13.9□□□□□ -0.18
CCNL1-216ENST00000475298 TAS2R14Q9NYV8 317 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 SEL1LQ9UBV2 794 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 USP15Q9Y4E8 981 aaPredicted RBP13.9□□□□□ -0.18
CCNL1-216ENST00000475298 TNS1Q9HBL0 1735 aaKnown RBP13.9□□□□□ -0.18
CCNL1-216ENST00000475298 PEX11AO75192 247 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 PTGER2P43116 358 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 HSD17B4P51659 736 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 EIF3BP55884 814 aaKnown RBP13.9□□□□□ -0.18
CCNL1-216ENST00000475298 POLE2P56282 527 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 IFI35P80217 286 aaPredicted RBP13.9□□□□□ -0.18
CCNL1-216ENST00000475298 MYL7Q01449 175 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 SPP2Q13103 211 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 PEX26Q7Z412 305 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 DAAM2Q86T65 1068 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 KCTD17Q8N5Z5 321 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 FITM2Q8N6M3 262 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 SLC30A5Q8TAD4 765 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 MKNK1Q9BUB5 465 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 RNPEPL1Q9HAU8 725 aa13.9□□□□□ -0.18
CCNL1-216ENST00000475298 SEPT11Q9NVA2 429 aaKnown RBP13.9□□□□□ -0.18
CCNL1-216ENST00000475298 CES2O00748 559 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 DHX15O43143 795 aaKnown RBP13.89□□□□□ -0.19
CCNL1-216ENST00000475298 ICAM1P05362 532 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 ALAS1P13196 640 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 ITGA4P13612 1032 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 CALB2P22676 271 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 PEX5P50542 639 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 KLC1Q07866 573 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 BFSP1Q12934 665 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 NFIL3Q16649 462 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 PHLDB3Q6NSJ2 640 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 APBB1IPQ7Z5R6 666 aaPredicted RBP13.89□□□□□ -0.19
CCNL1-216ENST00000475298 CLEC4DQ8WXI8 215 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 FAM136AQ96C01 138 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 PGM2Q96G03 612 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 IFT74Q96LB3 600 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 STK33Q9BYT3 514 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 RAVER2Q9HCJ3 691 aaKnown RBP13.89□□□□□ -0.19
CCNL1-216ENST00000475298 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.89□□□□□ -0.191e-6■□□□□ 10.3
CCNL1-216ENST00000475298 DLGAP2Q9P1A6 1054 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 BLOC1S6Q9UL45 172 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 NOC2LQ9Y3T9 749 aaKnown RBP13.89□□□□□ -0.19
CCNL1-216ENST00000475298 ZHX2Q9Y6X8 837 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 TPBGLP0DKB5 382 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 CCNB1P14635 433 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 ACADSP16219 412 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 IFNAR2P48551 515 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 SCNN1BP51168 640 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 RAD23BP54727 409 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 MRPS9P82933 396 aaKnown RBP13.89□□□□□ -0.19
CCNL1-216ENST00000475298 PABPC1LQ4VXU2 614 aaKnown RBP13.89□□□□□ -0.19
CCNL1-216ENST00000475298 GBP7Q8N8V2 638 aaPredicted RBP13.89□□□□□ -0.19
CCNL1-216ENST00000475298 ANKLE1Q8NAG6 615 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 RIT2Q99578 217 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 CBWD1Q9BRT8 395 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 STRA6Q9BX79 667 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 APEX2Q9UBZ4 518 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 PGAP2Q9UHJ9 254 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 AMACRQ9UHK6 382 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 ATP8A1Q9Y2Q0 1164 aa13.89□□□□□ -0.19
CCNL1-216ENST00000475298 E7ENQ6 273 aa13.88□□□□□ -0.19
CCNL1-216ENST00000475298 WNT10BO00744 389 aa13.88□□□□□ -0.19
CCNL1-216ENST00000475298 PLA2G6O60733 806 aa13.88□□□□□ -0.19
CCNL1-216ENST00000475298 GM2AP17900 193 aa13.88□□□□□ -0.19
CCNL1-216ENST00000475298 EIF2AK2P19525 551 aaKnown RBP13.88□□□□□ -0.19
CCNL1-216ENST00000475298 PDE6CP51160 858 aa13.88□□□□□ -0.19
CCNL1-216ENST00000475298 UGCGQ16739 394 aa13.88□□□□□ -0.19
CCNL1-216ENST00000475298 STXBP4Q6ZWJ1 553 aa13.88□□□□□ -0.19
CCNL1-216ENST00000475298 ANKRD23Q86SG2 305 aa13.88□□□□□ -0.19
CCNL1-216ENST00000475298 NT5DC3Q86UY8 548 aa13.88□□□□□ -0.19
CCNL1-216ENST00000475298 HOOK3Q86VS8 718 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms