RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 NMRK1Q9NWW6 199 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ITGA11Q9UKX5 1188 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ZNF148Q9UQR1 794 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 USP20Q9Y2K6 914 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PODXLO00592 558 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ERBB2P04626 1255 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 GSTA1P08263 222 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 GSTA2P09210 222 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 FAM200BP0CF97 657 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 DNAJB2P25686 324 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PSMA2P25787 234 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 CYP2C18P33260 490 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 SREBF1P36956 1147 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 AVPR1AP37288 418 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PPP3CCP48454 512 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 HNRNPH2P55795 449 aaKnown RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 RWDD2BP57060 319 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PDE1BQ01064 536 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 CCNG2Q16589 344 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 CRY2Q49AN0 593 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 UGT3A1Q6NUS8 523 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 CATSPERGQ6ZRH7 1159 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 TMC7Q7Z402 723 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ILDR1Q86SU0 546 aaPredicted RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 DNAAF3Q8N9W5 541 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 CCNYQ8ND76 341 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 SKA2Q8WVK7 121 aaPredicted RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 HPS3Q969F9 1004 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 MKL1Q969V6 931 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 CCDC124Q96CT7 223 aaKnown RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 GPR20Q99678 358 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 FSD1LQ9BXM9 530 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 UBXN6Q9BZV1 441 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ASCC2Q9H1I8 757 aaPredicted RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ANTXR1Q9H6X2 564 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PARVAQ9NVD7 372 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PCDHB5Q9Y5E4 795 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 BCL9LQ86UU0 1499 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 WNT10BO00744 389 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 RASGRF2O14827 1237 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 RNF40O75150 1001 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 SUN1O94901 812 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 INHBAP08476 426 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 SLC2A4P14672 509 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 FGFR2P21802 821 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 RPL9P32969 192 aaKnown RBP4.9□□□□□ -1.62
CCNL1-215ENST00000474539 TCF7P36402 384 aaPredicted RBP4.9□□□□□ -1.62
CCNL1-215ENST00000474539 ATP2C1P98194 919 aaPredicted RBP4.9□□□□□ -1.62
CCNL1-215ENST00000474539 KARSQ15046 597 aaKnown RBP4.9□□□□□ -1.62
CCNL1-215ENST00000474539 ISM2Q6H9L7 571 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 MPZL3Q6UWV2 235 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 ADAT2Q7Z6V5 191 aaKnown RBP4.9□□□□□ -1.62
CCNL1-215ENST00000474539 ZNF467Q7Z7K2 595 aaPredicted RBP4.9□□□□□ -1.62
CCNL1-215ENST00000474539 DDX53Q86TM3 631 aaKnown RBP4.9□□□□□ -1.62
CCNL1-215ENST00000474539 SPATS2Q86XZ4 545 aaKnown RBP4.9□□□□□ -1.62
CCNL1-215ENST00000474539 CCDC13Q8IYE1 715 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 ATP6V1E2Q96A05 226 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 ARHGEF26Q96DR7 871 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 ECT2Q9H8V3 914 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 UBE2TQ9NPD8 197 aaPredicted RBP4.9□□□□□ -1.62
CCNL1-215ENST00000474539 MRPL17Q9NRX2 175 aaKnown RBP4.9□□□□□ -1.62
CCNL1-215ENST00000474539 ADAM22Q9P0K1 906 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 HDAC6Q9UBN7 1215 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 POLLQ9UGP5 575 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 CPA4Q9UI42 421 aa4.9□□□□□ -1.62
CCNL1-215ENST00000474539 M0QYT0 321 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 RPN2P04844 631 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 KRT16P08779 473 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 ADCY8P40145 1251 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 HDAC4P56524 1084 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 POU5F1Q01860 360 aaKnown RBP4.9□□□□□ -1.63
CCNL1-215ENST00000474539 CYP27A1Q02318 531 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 GRM3Q14832 879 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 NAA25Q14CX7 972 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 PSMD6Q15008 389 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 TTLL9Q3SXZ7 439 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 EPHA10Q5JZY3 1008 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 DARS2Q6PI48 645 aaKnown RBP4.9□□□□□ -1.63
CCNL1-215ENST00000474539 ZPBP2Q6X784 338 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 PLPPR4Q7Z2D5 763 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 LINC00301Q8NCQ3 95 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.9□□□□□ -1.63
CCNL1-215ENST00000474539 RUBCNQ92622 972 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 NLNQ9BYT8 704 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 SLC28A3Q9HAS3 691 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 SEPT10Q9P0V9 454 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 UVRAGQ9P2Y5 699 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 DNAI1Q9UI46 699 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 MTMR6Q9Y217 621 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 BMP10O95393 424 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 GUCY2CP25092 1073 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 ACTR2P61160 394 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 MCM6Q14566 821 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 CCDC6Q16204 474 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 TTC31Q49AM3 519 aaPredicted RBP4.9□□□□□ -1.63
CCNL1-215ENST00000474539 TIGD5Q53EQ6 642 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 E4F1Q66K89 784 aaPredicted RBP4.9□□□□□ -1.63
CCNL1-215ENST00000474539 PDIK1LQ8N165 341 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 LRRC43Q8N309 656 aa4.9□□□□□ -1.63
CCNL1-215ENST00000474539 SPIRE2Q8WWL2 714 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms