RNA–Protein interactions for RNA: ENST00000472476.5

TARDBP-204, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-204ENST00000472476 SF3B1O75533 1304 aaKnown RBP eCLIP15.89■□□□□ 0.13
TARDBP-204ENST00000472476 EPG5Q9HCE0 2579 aa15.88■□□□□ 0.13
TARDBP-204ENST00000472476 KANSL1LA0AUZ9 987 aa15.88■□□□□ 0.13
TARDBP-204ENST00000472476 CCL16O15467 120 aa15.88■□□□□ 0.13
TARDBP-204ENST00000472476 MARCH6O60337 910 aa15.88■□□□□ 0.13
TARDBP-204ENST00000472476 C8AP07357 584 aa15.88■□□□□ 0.13
TARDBP-204ENST00000472476 XRCC6P12956 609 aaKnown RBP eCLIP15.88■□□□□ 0.13
TARDBP-204ENST00000472476 HOXA9P31269 272 aa15.88■□□□□ 0.13
TARDBP-204ENST00000472476 CREMQ03060 361 aa15.88■□□□□ 0.13
TARDBP-204ENST00000472476 FZD5Q13467 585 aa15.88■□□□□ 0.13
TARDBP-204ENST00000472476 PSMD5Q16401 504 aa15.88■□□□□ 0.13
TARDBP-204ENST00000472476 SLC44A4Q53GD3 710 aa15.88■□□□□ 0.13
TARDBP-204ENST00000472476 HACE1Q8IYU2 909 aa15.88■□□□□ 0.13
TARDBP-204ENST00000472476 RUBCNQ92622 972 aa15.88■□□□□ 0.13
TARDBP-204ENST00000472476 SNTG2Q9NY99 539 aa15.88■□□□□ 0.13
TARDBP-204ENST00000472476 DNMT3BQ9UBC3 853 aaKnown RBP15.88■□□□□ 0.13
TARDBP-204ENST00000472476 KMT2BQ9UMN6 2715 aaPredicted RBP15.88■□□□□ 0.13
TARDBP-204ENST00000472476 TPRP12270 2363 aaKnown RBP15.87■□□□□ 0.13
TARDBP-204ENST00000472476 F5P12259 2224 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 BTBD18B2RXH4 712 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 USO1O60763 962 aaKnown RBP15.87■□□□□ 0.13
TARDBP-204ENST00000472476 CDKL5O76039 1030 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 CD72P21854 359 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 RFX1P22670 979 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 TXKP42681 527 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 RAB33AQ14088 237 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 CALCRLQ16602 461 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 PPM1LQ5SGD2 360 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 EEF1DP3Q658K8 133 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 MAEAQ7L5Y9 396 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 CEP57Q86XR8 500 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 NOSTRINQ8IVI9 506 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 NELL1Q92832 810 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 PRIMPOLQ96LW4 560 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 PLA2G2FQ9BZM2 168 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 CCDC113Q9H0I3 377 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 TMEM60Q9H2L4 133 aa15.87■□□□□ 0.13
TARDBP-204ENST00000472476 ORC3Q9UBD5 711 aaPredicted RBP15.87■□□□□ 0.13
TARDBP-204ENST00000472476 LRRIQ4A6NIV6 560 aa15.86■□□□□ 0.13
TARDBP-204ENST00000472476 NRG2O14511 850 aaPredicted RBP15.86■□□□□ 0.13
TARDBP-204ENST00000472476 MED24O75448 989 aa15.86■□□□□ 0.13
TARDBP-204ENST00000472476 RECQL4O94761 1208 aa15.86■□□□□ 0.13
TARDBP-204ENST00000472476 THP07101 528 aa15.86■□□□□ 0.13
TARDBP-204ENST00000472476 POU2F2P09086 479 aa15.86■□□□□ 0.13
TARDBP-204ENST00000472476 FGFR3P22607 806 aa15.86■□□□□ 0.13
TARDBP-204ENST00000472476 OR1D2P34982 312 aa15.86■□□□□ 0.13
TARDBP-204ENST00000472476 KRT2P35908 639 aa15.86■□□□□ 0.13
TARDBP-204ENST00000472476 MLF2Q15773 248 aaPredicted RBP15.86■□□□□ 0.13
TARDBP-204ENST00000472476 ZNF528Q3MIS6 628 aa15.86■□□□□ 0.13
TARDBP-204ENST00000472476 AXDND1Q5T1B0 1012 aaPredicted RBP15.86■□□□□ 0.13
TARDBP-204ENST00000472476 DGLUCYQ7Z3D6 616 aa15.86■□□□□ 0.13
TARDBP-204ENST00000472476 CATSPER3Q86XQ3 398 aa15.86■□□□□ 0.13
TARDBP-204ENST00000472476 NPAS3Q8IXF0 933 aa15.86■□□□□ 0.13
TARDBP-204ENST00000472476 SHDQ96IW2 340 aa15.86■□□□□ 0.13
TARDBP-204ENST00000472476 KXD1Q9BQD3 176 aa15.86■□□□□ 0.13
TARDBP-204ENST00000472476 PRMT7Q9NVM4 692 aaPredicted RBP15.86■□□□□ 0.13
TARDBP-204ENST00000472476 FAM170BA6NMN3 283 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 LARGE1O95461 756 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 XBP1P17861 261 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 PRKCQQ04759 706 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 PUM1Q14671 1186 aaKnown RBP eCLIP15.85■□□□□ 0.13
TARDBP-204ENST00000472476 SLC5A9Q2M3M2 681 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 UVSSAQ2YD98 709 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 ZC3H14Q6PJT7 736 aaKnown RBP15.85■□□□□ 0.13
TARDBP-204ENST00000472476 ZNF687Q8N1G0 1237 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 C3orf58Q8NDZ4 430 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 SLC7A14Q8TBB6 771 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 CLDN23Q96B33 292 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 OSBPL6Q9BZF3 934 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 POLD4Q9HCU8 107 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 LTB4R2Q9NPC1 389 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 MTRRQ9UBK8 725 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 FBXO4Q9UKT5 387 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 CACNA1BQ00975 2339 aa15.85■□□□□ 0.13
TARDBP-204ENST00000472476 NT5DC1Q5TFE4 455 aa15.84■□□□□ 0.13
TARDBP-204ENST00000472476 LIN9Q5TKA1 542 aa15.84■□□□□ 0.13
TARDBP-204ENST00000472476 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.84■□□□□ 0.13
TARDBP-204ENST00000472476 MTSS1LQ765P7 747 aa15.84■□□□□ 0.13
TARDBP-204ENST00000472476 NECAB1Q8N987 351 aa15.84■□□□□ 0.13
TARDBP-204ENST00000472476 ZBTB44Q8NCP5 570 aa15.84■□□□□ 0.13
TARDBP-204ENST00000472476 PPP1R10Q96QC0 940 aaKnown RBP15.84■□□□□ 0.13
TARDBP-204ENST00000472476 POLIQ9UNA4 740 aa15.84■□□□□ 0.13
TARDBP-204ENST00000472476 COL4A2P08572 1712 aa15.84■□□□□ 0.13
TARDBP-204ENST00000472476 TMEM189-UBE2V1I3L0A0 370 aa15.83■□□□□ 0.12
TARDBP-204ENST00000472476 ACKR2O00590 384 aa15.83■□□□□ 0.12
TARDBP-204ENST00000472476 N4BP3O15049 544 aa15.83■□□□□ 0.12
TARDBP-204ENST00000472476 LILRB5O75023 590 aa15.83■□□□□ 0.12
TARDBP-204ENST00000472476 ATP2B1P20020 1258 aa15.83■□□□□ 0.12
TARDBP-204ENST00000472476 TGM1P22735 817 aa15.83■□□□□ 0.12
TARDBP-204ENST00000472476 TARSP26639 723 aaKnown RBP15.83■□□□□ 0.12
TARDBP-204ENST00000472476 CLCNKBP51801 687 aa15.83■□□□□ 0.12
TARDBP-204ENST00000472476 PRPF4BQ13523 1007 aaKnown RBP15.83■□□□□ 0.12
TARDBP-204ENST00000472476 UBXN2BQ14CS0 331 aa15.83■□□□□ 0.12
TARDBP-204ENST00000472476 ME3Q16798 604 aa15.83■□□□□ 0.12
TARDBP-204ENST00000472476 RSPO4Q2I0M5 234 aaPredicted RBP15.83■□□□□ 0.12
TARDBP-204ENST00000472476 ING5Q8WYH8 240 aa15.83■□□□□ 0.12
TARDBP-204ENST00000472476 TUFT1Q9NNX1 390 aa15.83■□□□□ 0.12
TARDBP-204ENST00000472476 SPATA6Q9NWH7 488 aaPredicted RBP15.83■□□□□ 0.12
TARDBP-204ENST00000472476 KCNH3Q9ULD8 1083 aa15.83■□□□□ 0.12
TARDBP-204ENST00000472476 ACACBO00763 2458 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms