RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 PROZP22891 400 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 IGFBP6P24592 240 aaPredicted RBP9.9□□□□□ -0.82
USF1-204ENST00000472217 UBA7P41226 1012 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 GRM5P41594 1212 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 OSTNP61366 133 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 CREMQ03060 361 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 SIGLEC14Q08ET2 396 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 SF3A1Q15459 793 aaKnown RBP9.9□□□□□ -0.82
USF1-204ENST00000472217 ARSHQ5FYA8 562 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 FAM171A1Q5VUB5 890 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 MPZL3Q6UWV2 235 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 CCDC149Q6ZUS6 474 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 ZBTB33Q86T24 672 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 CEP57Q86XR8 500 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 PALB2Q86YC2 1186 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 TDRD5Q8NAT2 981 aaKnown RBP9.9□□□□□ -0.82
USF1-204ENST00000472217 TMEM161BQ8NDZ6 487 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 CMASQ8NFW8 434 aaPredicted RBP9.9□□□□□ -0.82
USF1-204ENST00000472217 FAM122AQ96E09 287 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 TTPALQ9BTX7 342 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 CCDC94Q9BW85 323 aaPredicted RBP9.9□□□□□ -0.82
USF1-204ENST00000472217 BACH2Q9BYV9 841 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 GOLGA2P5Q9HBQ8 144 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 KCND2Q9NZV8 630 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 SORCS3Q9UPU3 1222 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 USTQ9Y2C2 406 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 MYH11P35749 1972 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 SMIM28A0A1B0GU29 152 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 CCDC195A0A1B0GUA6 201 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 SLC26A4O43511 780 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 BRD1O95696 1058 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 ASGR2P07307 311 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 MAPTP10636 758 aaKnown RBP9.89□□□□□ -0.83
USF1-204ENST00000472217 MCF2P10911 925 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 HARSP12081 509 aaKnown RBP9.89□□□□□ -0.83
USF1-204ENST00000472217 PDCP20941 246 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 LONP1P36776 959 aaKnown RBP9.89□□□□□ -0.83
USF1-204ENST00000472217 CLCNKBP51801 687 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 SMTNP53814 917 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 YARSP54577 528 aaKnown RBP9.89□□□□□ -0.83
USF1-204ENST00000472217 SOX4Q06945 474 aaPredicted RBP9.89□□□□□ -0.83
USF1-204ENST00000472217 STRN3Q13033 797 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 RESTQ13127 1097 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 LILRA6Q6PI73 481 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 ELMSAN1Q6PJG2 1045 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 ALKAL1Q6UXT8 129 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 BMP8AQ7Z5Y6 402 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 GPBP1Q86WP2 473 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 ZDHHC14Q8IZN3 488 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 KREMEN2Q8NCW0 462 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 HDAC7Q8WUI4 952 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 PIK3R5Q8WYR1 880 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 ASIC4Q96FT7 647 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 CALML4Q96GE6 196 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 ZBTB45Q96K62 511 aaPredicted RBP9.89□□□□□ -0.83
USF1-204ENST00000472217 SNX27Q96L92 541 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 MFSD14AQ96MC6 490 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 UROC1Q96N76 676 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 REEP2Q9BRK0 252 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 TCHPQ9BT92 498 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 PLEKHA4Q9H4M7 779 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 TOPORSQ9NS56 1045 aaPredicted RBP9.89□□□□□ -0.83
USF1-204ENST00000472217 BLOC1S4Q9NUP1 217 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 ANKFY1Q9P2R3 1169 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 LIMD1Q9UGP4 676 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 DPP7Q9UHL4 492 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 ODF2LQ9ULJ1 636 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 TECTAO75443 2155 aa9.89□□□□□ -0.83
USF1-204ENST00000472217 CLUHO75153 1309 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 VWA8A3KMH1 1905 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 KMT2EQ8IZD2 1858 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 TMEM189-UBE2V1I3L0A0 370 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 MEFVO15553 781 aaPredicted RBP9.88□□□□□ -0.83
USF1-204ENST00000472217 N4BP1O75113 896 aaKnown RBP9.88□□□□□ -0.83
USF1-204ENST00000472217 TOM1L1O75674 476 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 B3GAT3O94766 335 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 C1RP00736 705 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 PLCG1P19174 1290 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 SYT1P21579 422 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 NCKAP1LP55160 1127 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 ELAVL2Q12926 359 aaKnown RBP9.88□□□□□ -0.83
USF1-204ENST00000472217 MTMR3Q13615 1198 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 DHX8Q14562 1220 aaKnown RBP9.88□□□□□ -0.83
USF1-204ENST00000472217 MCM6Q14566 821 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 NOLC1Q14978 699 aaKnown RBP eCLIP9.88□□□□□ -0.83
USF1-204ENST00000472217 KARSQ15046 597 aaKnown RBP9.88□□□□□ -0.83
USF1-204ENST00000472217 PTPAQ15257 358 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 PSMD5Q16401 504 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 UPP1Q16831 310 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 SEZ6Q53EL9 994 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 XKR4Q5GH76 650 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 FAM173BQ6P4H8 233 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 DCLRE1AQ6PJP8 1040 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 CD300LGQ6UXG3 332 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 ZPBP2Q6X784 338 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.88□□□□□ -0.83
USF1-204ENST00000472217 HAUS6Q7Z4H7 955 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 PLCD3Q8N3E9 789 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 C3orf58Q8NDZ4 430 aa9.88□□□□□ -0.83
USF1-204ENST00000472217 RASSF8Q8NHQ8 419 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms