RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 KHSRPQ92945 711 aaKnown RBP eCLIP16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 CLP1Q92989 425 aaKnown RBP16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 SNX27Q96L92 541 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 APOL6Q9BWW8 343 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 TYW1Q9NV66 732 aaKnown RBP16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 KANSL3Q9P2N6 904 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 AGO2Q9UKV8 859 aaKnown RBP16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 TRAF3IP3Q9Y228 551 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 TBKBP1A7MCY6 615 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 LDHAP00338 332 aaKnown RBP16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 ADRB2P07550 413 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 HARSP12081 509 aaKnown RBP16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 YARSP54577 528 aaKnown RBP16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 HSP90AA2PQ14568 343 aaPredicted RBP16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 NFIL3Q16649 462 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 ARMCX5Q6P1M9 558 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 ALKAL1Q6UXT8 129 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 TMEM192Q8IY95 271 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 THNSL1Q8IYQ7 743 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 SMYD4Q8IYR2 804 aaPredicted RBP16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 FIBCD1Q8N539 461 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 GSTCDQ8NEC7 633 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 URGCPQ8TCY9 931 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 GDPD5Q8WTR4 605 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 ZFP42Q96MM3 310 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 ACAP3Q96P50 834 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 GAD1Q99259 594 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 CBWD1Q9BRT8 395 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 PLEKHA5Q9HAU0 1116 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 CNTN3Q9P232 1028 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 PARP2Q9UGN5 583 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 CPSF3Q9UKF6 684 aaKnown RBP16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 RWDD3Q9Y3V2 267 aa16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 MRPL42Q9Y6G3 142 aaKnown RBP16.28■□□□□ 0.2
CDC42SE1-203ENST00000470278 ANK1P16157 1881 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 CARNS1A5YM72 827 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 BMP6P22004 513 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 GRIK3Q13003 919 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 MYBPC2Q14324 1141 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 PAN2Q504Q3 1202 aaKnown RBP16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 ZCWPW2Q504Y3 356 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 CCDC183Q5T5S1 534 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 FOXR2Q6PJQ5 311 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 SLC9A9Q8IVB4 645 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 ADSSL1Q8N142 457 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 FBXL18Q96ME1 805 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 SAMD11Q96NU1 681 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 RPS6KC1Q96S38 1066 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 TSPAN18Q96SJ8 248 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 TBC1D13Q9NVG8 400 aa16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.27■□□□□ 0.2
CDC42SE1-203ENST00000470278 PTGESO14684 152 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 MEFVO15553 781 aaPredicted RBP16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 EXTL3O43909 919 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 CXCL8P10145 99 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 KCNE1P15382 129 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 TNFSF9P41273 254 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 PRCPP42785 496 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 AFF1P51825 1210 aaKnown RBP16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 OSTNP61366 133 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 STIM1Q13586 685 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 ENOX2Q16206 610 aaKnown RBP16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 ZBTB41Q5SVQ8 909 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 CRELD2Q6UXH1 353 aaPredicted RBP16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 LRRC55Q6ZSA7 311 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 GPD1LQ8N335 351 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 CWH43Q9H720 699 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 KIAA1586Q9HCI6 787 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 HSPBP1Q9NZL4 362 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 MAPK8IP1Q9UQF2 711 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 INPP5FQ9Y2H2 1132 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 PIEZO1Q92508 2521 aa16.26■□□□□ 0.19
CDC42SE1-203ENST00000470278 TTC26A0AVF1 554 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 C5orf67F2Z3F1 127 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 PSMA7O14818 248 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 CALUO43852 315 aaPredicted RBP16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 LAG3P18627 525 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 SCNN1GP51170 649 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 ERVK-21P61565 698 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 PPP2R3AQ06190 1150 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 DSC1Q08554 894 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 NAB2Q15742 525 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 EDRF1Q3B7T1 1238 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 SLC10A6Q3KNW5 377 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 SEZ6Q53EL9 994 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 CENPPQ6IPU0 288 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 BRSK2Q8IWQ3 736 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 CD302Q8IX05 232 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 XXYLT1Q8NBI6 393 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 SYAP1Q96A49 352 aaPredicted RBP16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 DHTKD1Q96HY7 919 aaPredicted RBP16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 PPP1R10Q96QC0 940 aaKnown RBP16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 TGS1Q96RS0 853 aaKnown RBP16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 RPF1Q9H9Y2 349 aaKnown RBP16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 CD320Q9NPF0 282 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 C11orf16Q9NQ32 467 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 DMAC2Q9NW81 257 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 KLK14Q9P0G3 267 aa16.25■□□□□ 0.19
CDC42SE1-203ENST00000470278 TRIP11Q15643 1979 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms