RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 LAMP2P13473 410 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 NPTX2P47972 431 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 CLCNKBP51801 687 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 OSTNP61366 133 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 C8orf34Q49A92 452 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 KRT79Q5XKE5 535 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 DCLRE1AQ6PJP8 1040 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 DTHD1Q6ZMT9 781 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 GRASPQ7Z6J2 395 aaPredicted RBP14.61□□□□□ -0.07
CPSF4-210ENST00000469897 DAW1Q8N136 415 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 SIX5Q8N196 739 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 PIK3R5Q8WYR1 880 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 RAB34Q9BZG1 259 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 DUSP12Q9UNI6 340 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 TNFSF13BQ9Y275 285 aa14.61□□□□□ -0.07
CPSF4-210ENST00000469897 STK25O00506 426 aa14.6□□□□□ -0.07
CPSF4-210ENST00000469897 HIP1RO75146 1068 aa14.6□□□□□ -0.07
CPSF4-210ENST00000469897 PAPLNO95428 1278 aa14.6□□□□□ -0.07
CPSF4-210ENST00000469897 OR1D2P34982 312 aa14.6□□□□□ -0.07
CPSF4-210ENST00000469897 NTHL1P78549 312 aa14.6□□□□□ -0.07
CPSF4-210ENST00000469897 ZRSR1Q15695 479 aaKnown RBP14.6□□□□□ -0.07
CPSF4-210ENST00000469897 PSMD5Q16401 504 aa14.6□□□□□ -0.07
CPSF4-210ENST00000469897 DCAF4L1Q3SXM0 396 aa14.6□□□□□ -0.07
CPSF4-210ENST00000469897 MCTP1Q6DN14 999 aa14.6□□□□□ -0.07
CPSF4-210ENST00000469897 RINT1Q6NUQ1 792 aa14.6□□□□□ -0.07
CPSF4-210ENST00000469897 CD300LGQ6UXG3 332 aa14.6□□□□□ -0.07
CPSF4-210ENST00000469897 CEP120Q8N960 986 aa14.6□□□□□ -0.07
CPSF4-210ENST00000469897 PPP1R10Q96QC0 940 aaKnown RBP14.6□□□□□ -0.07
CPSF4-210ENST00000469897 ACO2Q99798 780 aaKnown RBP14.6□□□□□ -0.07
CPSF4-210ENST00000469897 GOLGA2P5Q9HBQ8 144 aa14.6□□□□□ -0.07
CPSF4-210ENST00000469897 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.6□□□□□ -0.07
CPSF4-210ENST00000469897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.6□□□□□ -0.07
CPSF4-210ENST00000469897 SMIM28A0A1B0GU29 152 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 LAD1O00515 517 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 FSHRP23945 695 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 ELAVL2Q12926 359 aaKnown RBP14.59□□□□□ -0.07
CPSF4-210ENST00000469897 PPM1LQ5SGD2 360 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 CWF19L1Q69YN2 538 aaKnown RBP14.59□□□□□ -0.07
CPSF4-210ENST00000469897 C1orf186Q6ZWK4 172 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 GET4Q7L5D6 327 aaPredicted RBP14.59□□□□□ -0.07
CPSF4-210ENST00000469897 KCNK18Q7Z418 384 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 PLIN2Q99541 437 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 TCHPQ9BT92 498 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 MMTAG2Q9BU76 263 aaKnown RBP14.59□□□□□ -0.07
CPSF4-210ENST00000469897 RUSC1Q9BVN2 902 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 TARS2Q9BW92 718 aaKnown RBP14.59□□□□□ -0.07
CPSF4-210ENST00000469897 TMEM134Q9H6X4 195 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 PTPRHQ9HD43 1115 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 KMT5AQ9NQR1 393 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 WNT16Q9UBV4 365 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 FBXW11Q9UKB1 542 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 POLIQ9UNA4 740 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 WDFY4Q6ZS81 3184 aa14.59□□□□□ -0.07
CPSF4-210ENST00000469897 KRBA1A5PL33 1030 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 I3L4J1 428 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 CCL16O15467 120 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 GFRA3O60609 400 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 C8AP07357 584 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 AOC1P19801 751 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 FGFR3P22607 806 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 GRM5P41594 1212 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 BRCC3P46736 316 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 YARSP54577 528 aaKnown RBP14.58□□□□□ -0.08
CPSF4-210ENST00000469897 RAD51AP2Q09MP3 1159 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 MAPK7Q13164 816 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 RAB33AQ14088 237 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 UPP1Q16831 310 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 PDXDC1Q6P996 788 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 ALKAL1Q6UXT8 129 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 RSPO2Q6UXX9 243 aaPredicted RBP14.58□□□□□ -0.08
CPSF4-210ENST00000469897 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.58□□□□□ -0.08
CPSF4-210ENST00000469897 TAS1R3Q7RTX0 852 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 APBB1IPQ7Z5R6 666 aaPredicted RBP14.58□□□□□ -0.08
CPSF4-210ENST00000469897 NXPE3Q969Y0 559 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 RPP25Q9BUL9 199 aaKnown RBP14.58□□□□□ -0.08
CPSF4-210ENST00000469897 CCDC94Q9BW85 323 aaPredicted RBP14.58□□□□□ -0.08
CPSF4-210ENST00000469897 MRPL4Q9BYD3 311 aaKnown RBP14.58□□□□□ -0.08
CPSF4-210ENST00000469897 CDT1Q9H211 546 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 CA14Q9ULX7 337 aa14.58□□□□□ -0.08
CPSF4-210ENST00000469897 RBM19Q9Y4C8 960 aaKnown RBP14.58□□□□□ -0.08
CPSF4-210ENST00000469897 ANHXE9PGG2 379 aa14.57□□□□□ -0.08
CPSF4-210ENST00000469897 SLC16A4O15374 487 aa14.57□□□□□ -0.08
CPSF4-210ENST00000469897 TRAPPC3O43617 180 aa14.57□□□□□ -0.08
CPSF4-210ENST00000469897 HNRNPA1P09651 372 aaKnown RBP eCLIP14.57□□□□□ -0.08
CPSF4-210ENST00000469897 TKTP29401 623 aaKnown RBP14.57□□□□□ -0.08
CPSF4-210ENST00000469897 PRPHP41219 470 aa14.57□□□□□ -0.08
CPSF4-210ENST00000469897 SOX4Q06945 474 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-210ENST00000469897 DMP1Q13316 513 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-210ENST00000469897 ZNF568Q3ZCX4 644 aa14.57□□□□□ -0.08
CPSF4-210ENST00000469897 XKR4Q5GH76 650 aa14.57□□□□□ -0.08
CPSF4-210ENST00000469897 AXDND1Q5T1B0 1012 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-210ENST00000469897 LIN9Q5TKA1 542 aa14.57□□□□□ -0.08
CPSF4-210ENST00000469897 C3orf58Q8NDZ4 430 aa14.57□□□□□ -0.08
CPSF4-210ENST00000469897 GPR152Q8TDT2 470 aa14.57□□□□□ -0.08
CPSF4-210ENST00000469897 ZBTB45Q96K62 511 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-210ENST00000469897 DRC1Q96MC2 740 aa14.57□□□□□ -0.08
CPSF4-210ENST00000469897 UROC1Q96N76 676 aa14.57□□□□□ -0.08
CPSF4-210ENST00000469897 ZMAT2Q96NC0 199 aaKnown RBP14.57□□□□□ -0.08
CPSF4-210ENST00000469897 ACAP3Q96P50 834 aa14.57□□□□□ -0.08
CPSF4-210ENST00000469897 PNMA5Q96PV4 448 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms