RNA–Protein interactions for RNA: ENST00000461405.1

PHF20-208, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-208ENST00000461405 CDH23Q9H251 3354 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 GOLGA8IPA6NC78 632 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 GOLGA8JA6NMD2 632 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 C5orf67F2Z3F1 127 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 F8W810 466 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 CLIC2O15247 247 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 CLTAP09496 248 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 CTNNB1P35222 781 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 PRCPP42785 496 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 SLC11A1P49279 550 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 PMS1P54277 932 aaKnown RBP13.21□□□□□ -0.29
PHF20-208ENST00000461405 SOX4Q06945 474 aaPredicted RBP13.21□□□□□ -0.29
PHF20-208ENST00000461405 EPC2Q52LR7 807 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 ZNF697Q5TEC3 545 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 RBM43Q6ZSC3 357 aaKnown RBP13.21□□□□□ -0.29
PHF20-208ENST00000461405 COLGALT2Q8IYK4 626 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 ADSSL1Q8N142 457 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 URGCPQ8TCY9 931 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 GDPD5Q8WTR4 605 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 FBXL18Q96ME1 805 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 ACAP3Q96P50 834 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 RPS6KC1Q96S38 1066 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 SEMA6BQ9H3T3 888 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 HSPBP1Q9NZL4 362 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 CACNG4Q9UBN1 327 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 TRAF3IP3Q9Y228 551 aa13.21□□□□□ -0.29
PHF20-208ENST00000461405 SMIM28A0A1B0GU29 152 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 PDXKO00764 312 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 EXTL3O43909 919 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 LPXNO60711 386 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 ZC3H11AO75152 810 aaKnown RBP eCLIP13.2□□□□□ -0.3
PHF20-208ENST00000461405 KCNE1P15382 129 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 LAG3P18627 525 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 BMPR1AP36894 532 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 YARSP54577 528 aaKnown RBP13.2□□□□□ -0.3
PHF20-208ENST00000461405 SPAG1Q07617 926 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 GRIN2CQ14957 1233 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 CBWD2Q8IUF1 395 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 BRSK2Q8IWQ3 736 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 GPD1LQ8N335 351 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 ARNTL2Q8WYA1 636 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 FAM84AQ96KN4 292 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 FAM161BQ96MY7 647 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 SAMD11Q96NU1 681 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 FAM213AQ9BRX8 229 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 GZF1Q9H116 711 aaPredicted RBP13.2□□□□□ -0.3
PHF20-208ENST00000461405 GOLGA2P5Q9HBQ8 144 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 TOPORSQ9NS56 1045 aaPredicted RBP13.2□□□□□ -0.3
PHF20-208ENST00000461405 DMAC2Q9NW81 257 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 MARCH5Q9NX47 278 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 TMEM63CQ9P1W3 806 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 CHD7Q9P2D1 2997 aa13.2□□□□□ -0.3
PHF20-208ENST00000461405 PTPRJQ12913 1337 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 TRIM49BA6NDI0 452 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 LACTBL1A8MY62 500 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 PPP1R3GB7ZBB8 358 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 RFXAPO00287 272 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 NFICP08651 508 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 CYP2J2P51589 502 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 BCAR1P56945 870 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 SNRPFP62306 86 aaKnown RBP13.19□□□□□ -0.3
PHF20-208ENST00000461405 PPP2R3AQ06190 1150 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 KYAT1Q16773 422 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 KCNT2Q6UVM3 1135 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 HS2ST1Q7LGA3 356 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 EFCAB13Q8IY85 973 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 SLC39A11Q8N1S5 342 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 TRIML1Q8N9V2 468 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 FBXO22Q8NEZ5 403 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 TMEM174Q8WUU8 243 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 C18orf25Q96B23 403 aaPredicted RBP13.19□□□□□ -0.3
PHF20-208ENST00000461405 GUCD1Q96NT3 240 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 PAAF1Q9BRP4 392 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 VN1R3Q9BXE9 311 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 PRDM12Q9H4Q4 367 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 RPF1Q9H9Y2 349 aaKnown RBP13.19□□□□□ -0.3
PHF20-208ENST00000461405 CGNQ9P2M7 1197 aaKnown RBP13.19□□□□□ -0.3
PHF20-208ENST00000461405 KANSL3Q9P2N6 904 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 TUBGCP4Q9UGJ1 667 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 RWDD3Q9Y3V2 267 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 SZT2Q5T011 3432 aa13.19□□□□□ -0.3
PHF20-208ENST00000461405 TSC2P49815 1807 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 CASTOR2A6NHX0 329 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 NT5C1B-RDH14C9J2C7 533 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 KIAA0391O15091 583 aaKnown RBP13.18□□□□□ -0.3
PHF20-208ENST00000461405 KIF20AO95235 890 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 NR3C1P04150 777 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 ITGB1P05556 798 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 THP07101 528 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 GALTP07902 379 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 IGFBP6P24592 240 aaPredicted RBP13.18□□□□□ -0.3
PHF20-208ENST00000461405 CASP4P49662 377 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 GUCY2FP51841 1108 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 RNASELQ05823 741 aaKnown RBP13.18□□□□□ -0.3
PHF20-208ENST00000461405 TUSC3Q13454 348 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 ADGRE1Q14246 886 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 ZBTB6Q15916 424 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 NFIL3Q16649 462 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 JADE1Q6IE81 842 aa13.18□□□□□ -0.3
PHF20-208ENST00000461405 CENPPQ6IPU0 288 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms