RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 PTGESO14684 152 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 XYLBO75191 536 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 FCARP24071 287 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 PDIA3P30101 505 aaKnown RBP13.18□□□□□ -0.3
HCFC1-204ENST00000461098 EVCP57679 992 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 AKAP17AQ02040 695 aaKnown RBP13.18□□□□□ -0.3
HCFC1-204ENST00000461098 SPIRE1Q08AE8 756 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 RAB33AQ14088 237 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 MXD4Q14582 209 aaPredicted RBP13.18□□□□□ -0.3
HCFC1-204ENST00000461098 LPAL2Q16609 132 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 UVSSAQ2YD98 709 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 PABPC1LQ4VXU2 614 aaKnown RBP13.18□□□□□ -0.3
HCFC1-204ENST00000461098 FAM171A1Q5VUB5 890 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 TANGO2Q6ICL3 276 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 CEP57Q86XR8 500 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 DAGLBQ8NCG7 672 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 FAM20AQ96MK3 541 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 MTRQ99707 1265 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 CHRDQ9H2X0 955 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 GMEB2Q9UKD1 530 aa13.18□□□□□ -0.3
HCFC1-204ENST00000461098 F5P12259 2224 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 CASTOR2A6NHX0 329 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 NCAM2O15394 837 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 GDF9O60383 454 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 DKC1O60832 514 aaKnown RBP eCLIP13.17□□□□□ -0.3
HCFC1-204ENST00000461098 NPTXRO95502 500 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 ARL2P36404 184 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 TUSC3Q13454 348 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 EPHA7Q15375 998 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 INF2Q27J81 1249 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 XKR9Q5GH70 373 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 LAIR1Q6GTX8 287 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 SLC27A1Q6PCB7 646 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 CELF5Q8N6W0 485 aaKnown RBP13.17□□□□□ -0.3
HCFC1-204ENST00000461098 NETO1Q8TDF5 533 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 MCRS1Q96EZ8 462 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 DYDC2Q96IM9 177 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 NFKBIZQ9BYH8 718 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 TRIM6Q9C030 488 aaPredicted RBP13.17□□□□□ -0.3
HCFC1-204ENST00000461098 PARP2Q9UGN5 583 aa13.17□□□□□ -0.3
HCFC1-204ENST00000461098 RALYQ9UKM9 306 aaKnown RBP13.17□□□□□ -0.3
HCFC1-204ENST00000461098 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.16□□□□□ -0.3
HCFC1-204ENST00000461098 TTLL13PA6NNM8 815 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 SLITRK3O94933 977 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 RETP07949 1114 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 RHOP08100 348 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 GLRA2P23416 452 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 OR1D2P34982 312 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 CCT2P78371 535 aaKnown RBP13.16□□□□□ -0.3
HCFC1-204ENST00000461098 FGD1P98174 961 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 NCBP1Q09161 790 aaKnown RBP13.16□□□□□ -0.3
HCFC1-204ENST00000461098 CTTNQ14247 550 aaKnown RBP13.16□□□□□ -0.3
HCFC1-204ENST00000461098 PPP4R3AQ6IN85 833 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 CD300LGQ6UXG3 332 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 OTUD6AQ7L8S5 288 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 DNASE1L2Q92874 299 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 ELSPBP1Q96BH3 223 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 AIFM3Q96NN9 605 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 AVENQ9NQS1 362 aaPredicted RBP13.16□□□□□ -0.3
HCFC1-204ENST00000461098 SEMA4GQ9NTN9 838 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 GDE1Q9NZC3 331 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 MTRRQ9UBK8 725 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 BAHCC1Q9P281 2608 aa13.16□□□□□ -0.3
HCFC1-204ENST00000461098 HRO43593 1189 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 LRP3O75074 770 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 CEBPBP17676 345 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 FGFR3P22607 806 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 NRLP54845 237 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 DMWDQ09019 674 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 TFDP1Q14186 410 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 GAS6Q14393 721 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 PRSS36Q5K4E3 855 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 PRR23CQ6ZRP0 262 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 RTL10Q7L3V2 364 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 SKAP1Q86WV1 359 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 MAP4K3Q8IVH8 894 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 HACE1Q8IYU2 909 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 JAKMIP1Q96N16 626 aaKnown RBP13.15□□□□□ -0.3
HCFC1-204ENST00000461098 SLKQ9H2G2 1235 aaPredicted RBP13.15□□□□□ -0.3
HCFC1-204ENST00000461098 ZSWIM4Q9H7M6 989 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 NDRG2Q9UN36 371 aaKnown RBP13.15□□□□□ -0.3
HCFC1-204ENST00000461098 MRPS17Q9Y2R5 130 aaKnown RBP13.15□□□□□ -0.3
HCFC1-204ENST00000461098 MRPS23Q9Y3D9 190 aaKnown RBP13.15□□□□□ -0.3
HCFC1-204ENST00000461098 SNX14Q9Y5W7 946 aa13.15□□□□□ -0.3
HCFC1-204ENST00000461098 TICRRQ7Z2Z1 1910 aa13.14□□□□□ -0.31
HCFC1-204ENST00000461098 RPS6KB1P23443 525 aa13.14□□□□□ -0.31
HCFC1-204ENST00000461098 CYP4A11Q02928 519 aa13.14□□□□□ -0.31
HCFC1-204ENST00000461098 GRM2Q14416 872 aa13.14□□□□□ -0.31
HCFC1-204ENST00000461098 CSRP2Q16527 193 aa13.14□□□□□ -0.31
HCFC1-204ENST00000461098 BMP2KLQ5H9B9 411 aa13.14□□□□□ -0.31
HCFC1-204ENST00000461098 CHAMP1Q96JM3 812 aa13.14□□□□□ -0.31
HCFC1-204ENST00000461098 LMAN1LQ9HAT1 526 aa13.14□□□□□ -0.31
HCFC1-204ENST00000461098 CDY1Q9Y6F8 540 aa13.14□□□□□ -0.31
HCFC1-204ENST00000461098 NCANO14594 1321 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 CNOT1A5YKK6 2376 aaKnown RBP13.13□□□□□ -0.31
HCFC1-204ENST00000461098 ARHGEF37A1IGU5 675 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 MAN2B1O00754 1011 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 TM4SF5O14894 197 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 TBX3O15119 743 aa13.13□□□□□ -0.31
HCFC1-204ENST00000461098 LYPLA2O95372 231 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms