RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	TSR3	Q9UJK0	312 aa	Known RBP	10.9	□□□□□ -0.66
CHEK2-221	ENST00000456369	TBX20	Q9UMR3	447 aa		10.9	□□□□□ -0.66
CHEK2-221	ENST00000456369	PLAGL2	Q9UPG8	496 aa		10.9	□□□□□ -0.66
CHEK2-221	ENST00000456369	GIT1	Q9Y2X7	761 aa		10.9	□□□□□ -0.66
CHEK2-221	ENST00000456369	MTCH2	Q9Y6C9	303 aa		10.9	□□□□□ -0.66
CHEK2-221	ENST00000456369	UNC80	Q8N2C7	3258 aa		10.9	□□□□□ -0.67
CHEK2-221	ENST00000456369	ARL5C	A6NH57	179 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369		H0YCG3	227 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	GRM6	O15303	877 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	ACTN4	O43707	911 aa	Known RBP	10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	PIGR	P01833	764 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	SLFN14	P0C7P3	912 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	ITGA4	P13612	1032 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	AKAP5	P24588	427 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	DNAJB1	P25685	340 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	NMT1	P30419	496 aa	Known RBP	10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	MLH1	P40692	756 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	ZNF165	P49910	485 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	GTF2B	Q00403	316 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	KRBA2	Q6ZNG9	492 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	ZNF720	Q7Z2F6	126 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	SFR1	Q86XK3	245 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	ZNF280B	Q86YH2	543 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	FAM178B	Q8IXR5	827 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	KLHL23	Q8NBE8	558 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	COLGALT1	Q8NBJ5	622 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	STAM	Q92783	540 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	ZFP42	Q96MM3	310 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	GAD1	Q99259	594 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	GAS2L1	Q99501	681 aa	Predicted RBP	10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	C7orf25	Q9BPX7	421 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	C11orf84	Q9BUA3	381 aa	Predicted RBP	10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	MRPL9	Q9BYD2	267 aa	Known RBP	10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	TRIM6	Q9C030	488 aa	Predicted RBP	10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	HAPLN2	Q9GZV7	340 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	CDT1	Q9H211	546 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	ZHX3	Q9H4I2	956 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	MAGEF1	Q9HAY2	307 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	OLFML3	Q9NRN5	406 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	LMCD1	Q9NZU5	365 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	SEL1L	Q9UBV2	794 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369	ZMYM2	Q9UBW7	1377 aa		10.89	□□□□□ -0.67
CHEK2-221	ENST00000456369		K7ENM7	598 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	MEFV	O15553	781 aa	Predicted RBP	10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	TOM1L1	O75674	476 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	DDHD2	O94830	711 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	ITGB1	P05556	798 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	GAP43	P17677	238 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	LAG3	P18627	525 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	PBX3	P40426	434 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	CASP5	P51878	434 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	NLRP12	P59046	1061 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	EHHADH	Q08426	723 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	DSC1	Q08554	894 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	STRN3	Q13033	797 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	GPM6B	Q13491	265 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	DCAF4L1	Q3SXM0	396 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	SLC39A4	Q6P5W5	647 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	KCNT2	Q6UVM3	1135 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	MPZL3	Q6UWV2	235 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	MAP4K3	Q8IVH8	894 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	TRIML1	Q8N9V2	468 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	SLC17A8	Q8NDX2	589 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	SPPL3	Q8TCT6	385 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	MRPL38	Q96DV4	380 aa	Known RBP	10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	ADPGK	Q9BRR6	497 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	FGFBP2	Q9BYJ0	223 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	LRRC27	Q9C0I9	530 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	DNAJC25	Q9H1X3	360 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	CXCL16	Q9H2A7	254 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	NRDE2	Q9H7Z3	1164 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	CBX8	Q9HC52	389 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	MIOS	Q9NXC5	875 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	SNTG2	Q9NY99	539 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	KANSL3	Q9P2N6	904 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369	INPP5F	Q9Y2H2	1132 aa		10.88	□□□□□ -0.67
CHEK2-221	ENST00000456369		A0A0C4DFX4	3053 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	GOLGA6L19	H0YKK7	550 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	PTGES	O14684	152 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	FAM189A1	O60320	539 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	FGF18	O76093	207 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	RECQL4	O94761	1208 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	POMC	P01189	267 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	GALT	P07902	379 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	MCF2	P10911	925 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	IGFBP4	P22692	258 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	CASP1	P29466	404 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	ABCD1	P33897	745 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	GRM5	P41594	1212 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	BCAR1	P56945	870 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	AMPD3	Q01432	767 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	PLCB3	Q01970	1234 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	MCL1	Q07820	350 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	KCNA1	Q09470	495 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	NAB2	Q15742	525 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	ZNF568	Q3ZCX4	644 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	XKR4	Q5GH76	650 aa		10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.87	□□□□□ -0.67
CHEK2-221	ENST00000456369	ALKAL1	Q6UXT8	129 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms