RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 AGMOQ6ZNB7 445 aa15.89■□□□□ 0.13
SHANK2-210ENST00000449116 ZNF365Q70YC5 407 aa15.89■□□□□ 0.13
SHANK2-210ENST00000449116 TRIM59Q8IWR1 403 aa15.89■□□□□ 0.13
SHANK2-210ENST00000449116 CD302Q8IX05 232 aa15.89■□□□□ 0.13
SHANK2-210ENST00000449116 RNF169Q8NCN4 708 aa15.89■□□□□ 0.13
SHANK2-210ENST00000449116 TMC2Q8TDI7 906 aa15.89■□□□□ 0.13
SHANK2-210ENST00000449116 LPPQ93052 612 aa15.89■□□□□ 0.13
SHANK2-210ENST00000449116 FAM212AQ96EL1 285 aa15.89■□□□□ 0.13
SHANK2-210ENST00000449116 ASB7Q9H672 318 aa15.89■□□□□ 0.13
SHANK2-210ENST00000449116 RSAD1Q9HA92 442 aa15.89■□□□□ 0.13
SHANK2-210ENST00000449116 PCDHB7Q9Y5E2 793 aa15.89■□□□□ 0.13
SHANK2-210ENST00000449116 TTC26A0AVF1 554 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 MEIS3P2A8K0S8 358 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 LACTBL1A8MY62 500 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 MEFVO15553 781 aaPredicted RBP15.88■□□□□ 0.13
SHANK2-210ENST00000449116 AMHP03971 560 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 RGS19P49795 217 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 EPHB4P54760 987 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 WNT7BP56706 349 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 WDR5P61964 334 aaKnown RBP15.88■□□□□ 0.13
SHANK2-210ENST00000449116 KRT31Q15323 416 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 XKR4Q5GH76 650 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 DCAF17Q5H9S7 520 aaPredicted RBP15.88■□□□□ 0.13
SHANK2-210ENST00000449116 TMEM240Q5SV17 173 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 ALKAL1Q6UXT8 129 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.88■□□□□ 0.135e-9■■■□□ 18.5
SHANK2-210ENST00000449116 OTOP2Q7RTS6 562 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 NPAS4Q8IUM7 802 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 PLEKHO2Q8TD55 490 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 PARD3BQ8TEW8 1205 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 CCDC127Q96BQ5 260 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 FNBP1Q96RU3 617 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 PDE11AQ9HCR9 933 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 CNTN3Q9P232 1028 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 LIMA1Q9UHB6 759 aaKnown RBP15.88■□□□□ 0.13
SHANK2-210ENST00000449116 LRFN2Q9ULH4 789 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 MICAL3Q7RTP6 2002 aa15.88■□□□□ 0.13
SHANK2-210ENST00000449116 LRRIQ3A6PVS8 624 aaPredicted RBP15.87■□□□□ 0.13
SHANK2-210ENST00000449116 TULP1O00294 542 aaPredicted RBP15.87■□□□□ 0.13
SHANK2-210ENST00000449116 TPM2P07951 284 aa15.87■□□□□ 0.13
SHANK2-210ENST00000449116 DLATP10515 647 aaKnown RBP15.87■□□□□ 0.13
SHANK2-210ENST00000449116 PRKCSHP14314 528 aaPredicted RBP15.87■□□□□ 0.13
SHANK2-210ENST00000449116 MLH1P40692 756 aa15.87■□□□□ 0.13
SHANK2-210ENST00000449116 KCNJ6P48051 423 aa15.87■□□□□ 0.13
SHANK2-210ENST00000449116 DLG4P78352 724 aa15.87■□□□□ 0.13
SHANK2-210ENST00000449116 MAN2A1Q16706 1144 aa15.87■□□□□ 0.13
SHANK2-210ENST00000449116 UVSSAQ2YD98 709 aa15.87■□□□□ 0.13
SHANK2-210ENST00000449116 TCERG1LQ5VWI1 586 aa15.87■□□□□ 0.13
SHANK2-210ENST00000449116 SLC35C1Q96A29 364 aa15.87■□□□□ 0.13
SHANK2-210ENST00000449116 TSPAN18Q96SJ8 248 aa15.87■□□□□ 0.13
SHANK2-210ENST00000449116 GAD1Q99259 594 aa15.87■□□□□ 0.13
SHANK2-210ENST00000449116 CGRRF1Q99675 332 aa15.87■□□□□ 0.13
SHANK2-210ENST00000449116 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.87■□□□□ 0.135e-7■□□□□ 9.5
SHANK2-210ENST00000449116 TUBGCP2Q9BSJ2 902 aa15.87■□□□□ 0.13
SHANK2-210ENST00000449116 KLK14Q9P0G3 267 aa15.87■□□□□ 0.13
SHANK2-210ENST00000449116 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.87■□□□□ 0.13
SHANK2-210ENST00000449116 GOLGA6L3A6NEY3 463 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 LRRC10BA6NIK2 292 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 ZBBXA8MT70 800 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 INPPL1O15357 1258 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 HOXA2O43364 376 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 STX10O60499 249 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 OFD1O75665 1012 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 TRIM49P0CI25 452 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 TRIM49CP0CI26 452 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 KCNE1P15382 129 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 TNNI1P19237 187 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 MAGEA10P43363 369 aaPredicted RBP15.86■□□□□ 0.13
SHANK2-210ENST00000449116 COPB1P53618 953 aaKnown RBP15.86■□□□□ 0.13
SHANK2-210ENST00000449116 CLDN10P78369 228 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 JADE1Q6IE81 842 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 GLB1LQ6UWU2 654 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 NT5DC4Q86YG4 428 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 WDR49Q8IV35 697 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 CRIPAKQ8N1N5 446 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 HERVK_113Q902F9 699 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 RPS6KC1Q96S38 1066 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 POP1Q99575 1024 aaKnown RBP15.86■□□□□ 0.13
SHANK2-210ENST00000449116 TAB2Q9NYJ8 693 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 DERAQ9Y315 318 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 C2CD2Q9Y426 696 aa15.86■□□□□ 0.13
SHANK2-210ENST00000449116 TTC3P53804 2025 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 SMIM28A0A1B0GU29 152 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 FSD2A1L4K1 749 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 ARL5CA6NH57 179 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 SERPINC1P01008 464 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 NFICP08651 508 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 FGFR1P11362 822 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 GTF2H1P32780 548 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 AP3M2P53677 418 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 DEFB103AP81534 67 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 FANCCQ00597 558 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 KCNH2Q12809 1159 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 TMEM132DQ14C87 1099 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 VWA3BQ502W6 1294 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 GLRA4Q5JXX5 417 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 CLLU1OSQ5K130 101 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 C1orf220Q5T0J3 134 aa15.85■□□□□ 0.13
SHANK2-210ENST00000449116 LMBRD2Q68DH5 695 aaPredicted RBP15.85■□□□□ 0.13
SHANK2-210ENST00000449116 APTXQ7Z2E3 356 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms