RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 MYH11P35749 1972 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 CAPN9O14815 690 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 DCTN3O75935 186 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 EYA4O95677 639 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 SPATA31C1P0DKV0 1188 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 BTDP43251 543 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 CLK2P49760 499 aaKnown RBP14.88□□□□□ -0.03
VPS52-212ENST00000445902 CDR2Q01850 454 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 USP4Q13107 963 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 CUL3Q13618 768 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 KPNB1Q14974 876 aaKnown RBP14.88□□□□□ -0.03
VPS52-212ENST00000445902 WASHC2DQ5SRD0 308 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 DAB2IPQ5VWQ8 1189 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 IRGCQ6NXR0 463 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 MYCT1Q8N699 235 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 PCDHB18PQ96TA0 734 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 HERPUD2Q9BSE4 406 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.88□□□□□ -0.031e-8■■■■■ 28.6
VPS52-212ENST00000445902 STOML1Q9UBI4 398 aa14.88□□□□□ -0.03
VPS52-212ENST00000445902 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.88□□□□□ -0.03
VPS52-212ENST00000445902 PNMA6FA0A0J9YX94 578 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 ABLIM1O14639 778 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 ZBTB39O15060 712 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 GGPS1O95749 300 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 ZCCHC18P0CG32 403 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 ATF2P15336 505 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 RPA3P35244 121 aaPredicted RBP14.87□□□□□ -0.03
VPS52-212ENST00000445902 ARHGAP22Q7Z5H3 698 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 CCDC125Q86Z20 511 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 ARHGEF19Q8IW93 802 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 ANKRD35Q8N283 1001 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 SYT2Q8N9I0 419 aaPredicted RBP14.87□□□□□ -0.03
VPS52-212ENST00000445902 ZNF564Q8TBZ8 553 aaPredicted RBP14.87□□□□□ -0.03
VPS52-212ENST00000445902 WNT8AQ9H1J5 351 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 SIGLEC16A6NMB1 481 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 ASMTLO95671 621 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 FGFR1P11362 822 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 RRM1P23921 792 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 C4orf50Q6ZRC1 276 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 C10orf82Q8WW14 230 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 ELMO3Q96BJ8 720 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 HEMGNQ9BXL5 484 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 CADM1Q9BY67 442 aaKnown RBP14.87□□□□□ -0.03
VPS52-212ENST00000445902 OCEL1Q9H607 264 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 SLAIN2Q9P270 581 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 LRCH1Q9Y2L9 728 aa14.87□□□□□ -0.03
VPS52-212ENST00000445902 KRT15P19012 456 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 ITIH2P19823 946 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 IVDP26440 423 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 LAMB2P55268 1798 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 ITPK1Q13572 414 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 ACSBG2Q5FVE4 666 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 NLRP9Q7RTR0 991 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 TAF1LQ8IZX4 1826 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 ZFAND2BQ8WV99 257 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 CD101Q93033 1021 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 IFT43Q96FT9 208 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 CDK5RAP2Q96SN8 1893 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 CFAP69A5D8W1 941 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 PIAS1O75925 651 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 SGPL1O95470 568 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 SKIP12755 728 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 CA4P22748 312 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 PTPN4P29074 926 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 RASSF2P50749 326 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 DLG4P78352 724 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 KIF22Q14807 665 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 SF3B3Q15393 1217 aaKnown RBP14.86□□□□□ -0.03
VPS52-212ENST00000445902 SLC1A5Q15758 541 aa14.86□□□□□ -0.03
VPS52-212ENST00000445902 PKN2Q16513 984 aaKnown RBP14.86□□□□□ -0.03
VPS52-212ENST00000445902 UBE2OQ9C0C9 1292 aaKnown RBP14.86□□□□□ -0.03
VPS52-212ENST00000445902 R3HDM2Q9Y2K5 976 aaKnown RBP14.86□□□□□ -0.03
VPS52-212ENST00000445902 EXOC1LA0A1B0GW35 172 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 hCG_1984214I3L0E3 225 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 EDF1O60869 148 aaKnown RBP14.85□□□□□ -0.03
VPS52-212ENST00000445902 TBX10O75333 385 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 TAL1P17542 331 aaPredicted RBP14.85□□□□□ -0.03
VPS52-212ENST00000445902 SMARCA1P28370 1054 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 KCNQ4P56696 695 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 DPP8Q6V1X1 898 aaPredicted RBP14.85□□□□□ -0.03
VPS52-212ENST00000445902 OTOAQ7RTW8 1153 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 ZNF713Q8N859 430 aaPredicted RBP14.85□□□□□ -0.03
VPS52-212ENST00000445902 FBXO41Q8TF61 875 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 SLC5A5Q92911 643 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 ZNF653Q96CK0 615 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 PRR11Q96HE9 360 aaPredicted RBP14.85□□□□□ -0.03
VPS52-212ENST00000445902 C12orf65Q9H3J6 166 aaKnown RBP14.85□□□□□ -0.03
VPS52-212ENST00000445902 TRABDQ9H4I3 376 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 LRRC19Q9H756 370 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 FAM13AO94988 1023 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 AKR1B1P15121 316 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 SNAP25P60880 206 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 PICALMQ13492 652 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 SPARCL1Q14515 664 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 PLEKHG4Q58EX7 1191 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 LRRC74BQ6ZQY2 392 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 SCYL3Q8IZE3 742 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 WDR60Q8WVS4 1066 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 ITFG2Q969R8 447 aa14.85□□□□□ -0.03
VPS52-212ENST00000445902 GBP5Q96PP8 586 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms