RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 ADSSL1Q8N142 457 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 SH2D3CQ8N5H7 860 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 BCAS4Q8TDM0 211 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 NOC4LQ9BVI4 516 aaKnown RBP6.78□□□□□ -1.32
PUM1-207ENST00000440538 EIF2AQ9BY44 585 aaKnown RBP6.78□□□□□ -1.32
PUM1-207ENST00000440538 HIPK3Q9H422 1215 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 YY1AP1Q9H869 796 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 FAM207AQ9NSI2 230 aaPredicted RBP6.78□□□□□ -1.32
PUM1-207ENST00000440538 FRMD4BQ9Y2L6 1034 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 FAM237AA0A1B0GTK4 181 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 RRN3P2A6NIE6 340 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 KCNJ18B7U540 433 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 MAGEB2O15479 319 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 GAP43P17677 238 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 RFC5P40937 340 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 SARSP49591 514 aaKnown RBP6.78□□□□□ -1.32
PUM1-207ENST00000440538 KLK7P49862 253 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 IRAK1P51617 712 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 UBXN1Q04323 297 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 KCNJ12Q14500 433 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 PPP2R5AQ15172 486 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 LRRC26Q2I0M4 334 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 MMS22LQ6ZRQ5 1243 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 TEX2Q8IWB9 1127 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 ANKRD20A12PQ8NF67 263 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 PANX2Q96RD6 677 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 FNBP1Q96RU3 617 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 NIFKQ9BYG3 293 aaKnown RBP6.78□□□□□ -1.32
PUM1-207ENST00000440538 AGO3Q9H9G7 860 aaKnown RBP6.78□□□□□ -1.32
PUM1-207ENST00000440538 CD248Q9HCU0 757 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 MYH15Q9Y2K3 1946 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 RCCD1A6NED2 376 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 CCNE1P24864 410 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 PBX3P40426 434 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 SLC26A2P50443 739 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 GPC3P51654 580 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 PRMT2P55345 433 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 RTP1P59025 263 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 GNGT1P63211 74 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 MXD4Q14582 209 aaPredicted RBP6.78□□□□□ -1.32
PUM1-207ENST00000440538 TARBP2Q15633 366 aaKnown RBP6.78□□□□□ -1.32
PUM1-207ENST00000440538 MAP9Q49MG5 647 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 SPOUT1Q5T280 376 aaKnown RBP6.78□□□□□ -1.32
PUM1-207ENST00000440538 ATF7IP2Q5U623 682 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 SCARA5Q6ZMJ2 495 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 NECAB2Q7Z6G3 386 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 JPH2Q9BR39 696 aaPredicted RBP6.78□□□□□ -1.32
PUM1-207ENST00000440538 PI4K2AQ9BTU6 479 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 NXF3Q9H4D5 531 aaKnown RBP6.78□□□□□ -1.32
PUM1-207ENST00000440538 MAGEF1Q9HAY2 307 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 NLRC4Q9NPP4 1024 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 SNTG2Q9NY99 539 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 ODF2LQ9ULJ1 636 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 ST3GAL5Q9UNP4 418 aa6.78□□□□□ -1.32
PUM1-207ENST00000440538 A0A087WUV0 522 aaPredicted RBP6.77□□□□□ -1.33
PUM1-207ENST00000440538 ARVCFO00192 962 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 CXCL8P10145 99 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 ARF4P18085 180 aaPredicted RBP6.77□□□□□ -1.33
PUM1-207ENST00000440538 EIF4BP23588 611 aaKnown RBP6.77□□□□□ -1.33
PUM1-207ENST00000440538 HOXD13P35453 343 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 KRT9P35527 623 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 DLG4P78352 724 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 AMPD2Q01433 879 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 SF3A3Q12874 501 aaKnown RBP eCLIP6.77□□□□□ -1.337e-7■■□□□ 12.6
PUM1-207ENST00000440538 EFCAB13Q8IY85 973 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 FAM186BQ8IYM0 893 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 DBF4BQ8NFT6 615 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 ZFP42Q96MM3 310 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 ADAM2Q99965 735 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 SELENOOQ9BVL4 669 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 CXCL16Q9H2A7 254 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 CXorf56Q9H5V9 222 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 AGPAT3Q9NRZ7 376 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 ABHD10Q9NUJ1 306 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 HSPBP1Q9NZL4 362 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 CAPN7Q9Y6W3 813 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 PLXNA1Q9UIW2 1896 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 UNC80Q8N2C7 3258 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 EYSQ5T1H1 3165 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 CALUO43852 315 aaPredicted RBP6.77□□□□□ -1.33
PUM1-207ENST00000440538 AKAP3O75969 853 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 POMCP01189 267 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 CXCR5P32302 372 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 CYP27A1Q02318 531 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 PAK2Q13177 524 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 PDCLQ13371 301 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 RAPGEF1Q13905 1077 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 SNX17Q15036 470 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 KRT31Q15323 416 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 SND1Q7KZF4 910 aaKnown RBP eCLIP6.77□□□□□ -1.33
PUM1-207ENST00000440538 KLHDC9Q8NEP7 349 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 CAGE1Q8TC20 777 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 ARL8AQ96BM9 186 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 ADPGKQ9BRR6 497 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 IFIH1Q9BYX4 1025 aaKnown RBP6.77□□□□□ -1.33
PUM1-207ENST00000440538 FAM107BQ9H098 131 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 RNF39Q9H2S5 420 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 GOLGA2P5Q9HBQ8 144 aa6.77□□□□□ -1.33
PUM1-207ENST00000440538 AGO2Q9UKV8 859 aaKnown RBP6.77□□□□□ -1.33
PUM1-207ENST00000440538 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.77□□□□□ -1.332e-9■■■□□ 17.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms