RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 UBE2R2Q712K3 238 aaPredicted RBP6.43□□□□□ -1.38
LINC00458-202ENST00000427299 RNF180Q86T96 592 aa6.43□□□□□ -1.38
LINC00458-202ENST00000427299 IL17RAQ96F46 866 aa6.43□□□□□ -1.38
LINC00458-202ENST00000427299 FDXACB1Q9BRP7 624 aaPredicted RBP6.43□□□□□ -1.38
LINC00458-202ENST00000427299 ORAI3Q9BRQ5 295 aa6.43□□□□□ -1.38
LINC00458-202ENST00000427299 CHMP4AQ9BY43 222 aa6.43□□□□□ -1.38
LINC00458-202ENST00000427299 EPC1Q9H2F5 836 aa6.43□□□□□ -1.38
LINC00458-202ENST00000427299 SYBUQ9NX95 663 aa6.43□□□□□ -1.38
LINC00458-202ENST00000427299 H2AFY2Q9P0M6 372 aaPredicted RBP6.43□□□□□ -1.38
LINC00458-202ENST00000427299 COL4A3BPQ9Y5P4 624 aa6.43□□□□□ -1.38
LINC00458-202ENST00000427299 MADDQ8WXG6 1647 aa6.43□□□□□ -1.38
LINC00458-202ENST00000427299 CCDC144AA2RUR9 1427 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 ABCC1P33527 1531 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 CLASP1Q7Z460 1538 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 KIF1BO60333 1816 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 ATP2A2P16615 1042 aaKnown RBP6.42□□□□□ -1.38
LINC00458-202ENST00000427299 STRIP1Q5VSL9 837 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 SYCE2Q6PIF2 218 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 GPRIN1Q7Z2K8 1008 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 GDF7Q7Z4P5 450 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 LRRTM3Q86VH5 581 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 ARHGEF19Q8IW93 802 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 CDYL2Q8N8U2 506 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 TARS2Q9BW92 718 aaKnown RBP6.42□□□□□ -1.38
LINC00458-202ENST00000427299 PRDM13Q9H4Q3 707 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 PCDH12Q9NPG4 1184 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 TRPM5Q9NZQ8 1165 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 ANKFY1Q9P2R3 1169 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 DKK2Q9UBU2 259 aa6.42□□□□□ -1.38
LINC00458-202ENST00000427299 ZCCHC11Q5TAX3 1644 aaKnown RBP6.42□□□□□ -1.38
LINC00458-202ENST00000427299 ATP10AO60312 1499 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 TRPM2O94759 1503 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 CFAP74Q9C0B2 1584 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 LEFTY2O00292 366 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 RNASET2O00584 256 aaKnown RBP6.41□□□□□ -1.38
LINC00458-202ENST00000427299 NCR1O76036 304 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 MYCLP1P12525 358 aaPredicted RBP6.41□□□□□ -1.38
LINC00458-202ENST00000427299 GZMKP49863 264 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 LRRC32Q14392 662 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 CFAP100Q494V2 611 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 CCDC62Q6P9F0 684 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 MSL3Q8N5Y2 521 aaKnown RBP6.41□□□□□ -1.38
LINC00458-202ENST00000427299 DCLRE1CQ96SD1 692 aaKnown RBP6.41□□□□□ -1.38
LINC00458-202ENST00000427299 WDR11Q9BZH6 1224 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 MTFR1LQ9H019 292 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 AKIP1Q9NQ31 210 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 MAPRE3Q9UPY8 281 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 NUDCQ9Y266 331 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 NOP58Q9Y2X3 529 aaKnown RBP6.41□□□□□ -1.38
LINC00458-202ENST00000427299 MYOM1P52179 1685 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 IFT172Q9UG01 1749 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 GPRASP1Q5JY77 1395 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 PRAG1Q86YV5 1406 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 ATP10BO94823 1461 aa6.41□□□□□ -1.38
LINC00458-202ENST00000427299 GAGE12BA1L429 117 aa6.4□□□□□ -1.38
LINC00458-202ENST00000427299 GAGE12HA6NDE8 117 aa6.4□□□□□ -1.38
LINC00458-202ENST00000427299 PDE8AO60658 829 aa6.4□□□□□ -1.38
LINC00458-202ENST00000427299 PFKMP08237 780 aa6.4□□□□□ -1.38
LINC00458-202ENST00000427299 TYRP1P17643 537 aa6.4□□□□□ -1.38
LINC00458-202ENST00000427299 CD40P25942 277 aa6.4□□□□□ -1.38
LINC00458-202ENST00000427299 USP14P54578 494 aa6.4□□□□□ -1.38
LINC00458-202ENST00000427299 CSRP2Q16527 193 aa6.4□□□□□ -1.38
LINC00458-202ENST00000427299 BEAN1Q3B7T3 259 aa6.4□□□□□ -1.38
LINC00458-202ENST00000427299 ZBTB41Q5SVQ8 909 aa6.4□□□□□ -1.38
LINC00458-202ENST00000427299 TAS1R1Q7RTX1 841 aa6.4□□□□□ -1.38
LINC00458-202ENST00000427299 ZCRB1Q8TBF4 217 aaKnown RBP6.4□□□□□ -1.38
LINC00458-202ENST00000427299 R3HDMLQ9H3Y0 253 aa6.4□□□□□ -1.38
LINC00458-202ENST00000427299 CAAP1Q9H8G2 361 aa6.4□□□□□ -1.38
LINC00458-202ENST00000427299 ADARB2Q9NS39 739 aaKnown RBP6.4□□□□□ -1.38
LINC00458-202ENST00000427299 HDAC5Q9UQL6 1122 aa6.4□□□□□ -1.38
LINC00458-202ENST00000427299 MYBBP1AQ9BQG0 1328 aaKnown RBP6.4□□□□□ -1.39
LINC00458-202ENST00000427299 NUP155O75694 1391 aa6.4□□□□□ -1.39
LINC00458-202ENST00000427299 LRPPRCP42704 1394 aaKnown RBP6.4□□□□□ -1.39
LINC00458-202ENST00000427299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.4□□□□□ -1.39
LINC00458-202ENST00000427299 MYO3AQ8NEV4 1616 aa6.39□□□□□ -1.39
LINC00458-202ENST00000427299 ZSCAN20P17040 1043 aaPredicted RBP6.39□□□□□ -1.39
LINC00458-202ENST00000427299 DUSP2Q05923 314 aa6.39□□□□□ -1.39
LINC00458-202ENST00000427299 RALBP1Q15311 655 aa6.39□□□□□ -1.39
LINC00458-202ENST00000427299 BTNL9Q6UXG8 535 aa6.39□□□□□ -1.39
LINC00458-202ENST00000427299 XYLT1Q86Y38 959 aa6.39□□□□□ -1.39
LINC00458-202ENST00000427299 SYT12Q8IV01 421 aa6.39□□□□□ -1.39
LINC00458-202ENST00000427299 FAM9BQ8IZU0 186 aa6.39□□□□□ -1.39
LINC00458-202ENST00000427299 EFHBQ8N7U6 833 aa6.39□□□□□ -1.39
LINC00458-202ENST00000427299 SUPT20HQ8NEM7 779 aa6.39□□□□□ -1.39
LINC00458-202ENST00000427299 LINC00476Q8WZB0 136 aa6.39□□□□□ -1.39
LINC00458-202ENST00000427299 NAF1Q96HR8 494 aaKnown RBP6.39□□□□□ -1.39
LINC00458-202ENST00000427299 ZNF496Q96IT1 587 aaPredicted RBP6.39□□□□□ -1.39
LINC00458-202ENST00000427299 USP36Q9P275 1121 aaKnown RBP6.39□□□□□ -1.39
LINC00458-202ENST00000427299 EPN1Q9Y6I3 576 aaPredicted RBP6.39□□□□□ -1.39
LINC00458-202ENST00000427299 COX11Q9Y6N1 276 aa6.39□□□□□ -1.39
LINC00458-202ENST00000427299 WDR7Q9Y4E6 1490 aa6.39□□□□□ -1.39
LINC00458-202ENST00000427299 ZFYVE16Q7Z3T8 1539 aa6.39□□□□□ -1.39
LINC00458-202ENST00000427299 INO80Q9ULG1 1556 aaPredicted RBP6.39□□□□□ -1.39
LINC00458-202ENST00000427299 A0A1W2PR48 441 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 PLEKHD1A6NEE1 506 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 F2P00734 622 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 TSPY4P0CV99 314 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 TSPY10P0CW01 314 aa6.38□□□□□ -1.39
LINC00458-202ENST00000427299 ZNF37AP17032 561 aaPredicted RBP6.38□□□□□ -1.39
LINC00458-202ENST00000427299 BMPR1AP36894 532 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms