RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 RXFP1Q9HBX9 757 aa13.98□□□□□ -0.17
GPC1-204ENST00000426280 FAM86C2PA6NEL3 165 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 ANKRD63C9JTQ0 380 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 PI4K2BG5E9Z4 385 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 I3L4J1 428 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 ADAM12O43184 909 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 SP100P23497 879 aaPredicted RBP13.97□□□□□ -0.17
GPC1-204ENST00000426280 TNFSF9P41273 254 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 CLCN4P51793 760 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 CLCNKBP51801 687 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 SPAG1Q07617 926 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 HSP90AA2PQ14568 343 aaPredicted RBP13.97□□□□□ -0.17
GPC1-204ENST00000426280 ZNF568Q3ZCX4 644 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 RARS2Q5T160 578 aaKnown RBP13.97□□□□□ -0.17
GPC1-204ENST00000426280 SLC39A4Q6P5W5 647 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 GLYCTKQ8IVS8 523 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 CASP10Q92851 521 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 C18orf25Q96B23 403 aaPredicted RBP13.97□□□□□ -0.17
GPC1-204ENST00000426280 DNAJC19Q96DA6 116 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 TCHPQ9BT92 498 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 ZHX3Q9H4I2 956 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 KCND2Q9NZV8 630 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 PRKAG3Q9UGI9 489 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 ADAM28Q9UKQ2 775 aa13.97□□□□□ -0.17
GPC1-204ENST00000426280 LOC730098B7Z3J9 87 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 TRAK2O60296 914 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 TADA2AO75478 443 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 MCF2P10911 925 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 KLRC2P26717 231 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 BRCC3P46736 316 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 GLUD2P49448 558 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 KCNA1Q09470 495 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 RRAGBQ5VZM2 374 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 SHC4Q6S5L8 630 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 MPZL3Q6UWV2 235 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 TMC5Q6UXY8 1006 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 PALB2Q86YC2 1186 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 RNF135Q8IUD6 432 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 KRI1Q8N9T8 703 aaKnown RBP13.96□□□□□ -0.17
GPC1-204ENST00000426280 RASSF8Q8NHQ8 419 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 RIN2Q8WYP3 895 aaPredicted RBP13.96□□□□□ -0.17
GPC1-204ENST00000426280 RPGRIP1Q96KN7 1286 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 POMKQ9H5K3 350 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 MRPL17Q9NRX2 175 aaKnown RBP13.96□□□□□ -0.17
GPC1-204ENST00000426280 ANKFY1Q9P2R3 1169 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 ODF2LQ9ULJ1 636 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 TBX20Q9UMR3 447 aa13.96□□□□□ -0.17
GPC1-204ENST00000426280 ZMYM2Q9UBW7 1377 aa13.96□□□□□ -0.18
GPC1-204ENST00000426280 SPTLC2O15270 562 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 FAM189A1O60320 539 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 TOM1L1O75674 476 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 FAM13AO94988 1023 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 PDIA4P13667 645 aaKnown RBP13.95□□□□□ -0.18
GPC1-204ENST00000426280 SMTNP53814 917 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 MCL1Q07820 350 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 STRN3Q13033 797 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 CBX2Q14781 532 aaPredicted RBP13.95□□□□□ -0.18
GPC1-204ENST00000426280 AXDND1Q5T1B0 1012 aaPredicted RBP13.95□□□□□ -0.18
GPC1-204ENST00000426280 FAM171A1Q5VUB5 890 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 RSPO2Q6UXX9 243 aaPredicted RBP13.95□□□□□ -0.18
GPC1-204ENST00000426280 SFR1Q86XK3 245 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 PDILTQ8N807 584 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 ZSWIM2Q8NEG5 633 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 LNX1Q8TBB1 728 aaPredicted RBP13.95□□□□□ -0.18
GPC1-204ENST00000426280 DDX12PQ92771 950 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 SNX27Q96L92 541 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 FBXL18Q96ME1 805 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 ACAP3Q96P50 834 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 ADAM7Q9H2U9 754 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 TBC1D7Q9P0N9 293 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 LARSQ9P2J5 1176 aaKnown RBP13.95□□□□□ -0.18
GPC1-204ENST00000426280 MUTYHQ9UIF7 546 aa13.95□□□□□ -0.18
GPC1-204ENST00000426280 MORC2Q9Y6X9 1032 aaPredicted RBP13.95□□□□□ -0.18
GPC1-204ENST00000426280 TRIP11Q15643 1979 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 K7ENM7 598 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 RFPL2O75678 378 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 KRT18P05783 430 aaKnown RBP13.94□□□□□ -0.18
GPC1-204ENST00000426280 URODP06132 367 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 HOXB8P17481 243 aaPredicted RBP13.94□□□□□ -0.18
GPC1-204ENST00000426280 PLXNA3P51805 1871 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 CASP5P51878 434 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 GTF2BQ00403 316 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 DNM1Q05193 864 aaKnown RBP13.94□□□□□ -0.18
GPC1-204ENST00000426280 STK38Q15208 465 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 E2F4Q16254 413 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 UPP1Q16831 310 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 LILRA6Q6PI73 481 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 ZPBP2Q6X784 338 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 CEP57Q86XR8 500 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 KCNN1Q92952 543 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 ZNF396Q96N95 335 aaPredicted RBP13.94□□□□□ -0.18
GPC1-204ENST00000426280 CLSTN3Q9BQT9 956 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 LRFN3Q9BTN0 628 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 CCDC94Q9BW85 323 aaPredicted RBP13.94□□□□□ -0.18
GPC1-204ENST00000426280 PHF7Q9BWX1 381 aaPredicted RBP13.94□□□□□ -0.18
GPC1-204ENST00000426280 STRA6Q9BX79 667 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 PARVGQ9HBI0 331 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 TUBGCP4Q9UGJ1 667 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 FAM50BQ9Y247 325 aa13.94□□□□□ -0.18
GPC1-204ENST00000426280 CARNS1A5YM72 827 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms