RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 USH1CQ9Y6N9 552 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 MYH14Q7Z406 1995 aaKnown RBP17.73■□□□□ 0.43
PKP4-204ENST00000421462 CFAP69A5D8W1 941 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 NVLO15381 856 aaKnown RBP17.73■□□□□ 0.43
PKP4-204ENST00000421462 ALAS1P13196 640 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 SP100P23497 879 aaPredicted RBP17.73■□□□□ 0.43
PKP4-204ENST00000421462 RRM1P23921 792 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 SMARCA1P28370 1054 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 HSPA2P54652 639 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 DSTYKQ6XUX3 929 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 PPP1R21Q6ZMI0 780 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 ANKRD35Q8N283 1001 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 AGGF1Q8N302 714 aaeCLIP17.73■□□□□ 0.43
PKP4-204ENST00000421462 BORCS6Q96GS4 357 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 CCDC77Q9BR77 488 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 WNT8AQ9H1J5 351 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 LRMDAQ9H2I8 198 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 ZFP69BQ9UJL9 534 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 A0A0G2JND7 137 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 GTPBP10A4D1E9 387 aaKnown RBP17.73■□□□□ 0.43
PKP4-204ENST00000421462 GOLGA8IPA6NC78 632 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 GOLGA8JA6NMD2 632 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 LIN7AO14910 233 aaPredicted RBP17.73■□□□□ 0.43
PKP4-204ENST00000421462 CDH16O75309 829 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 T-ENOLP0DO92 83 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 SSTR3P32745 418 aaPredicted RBP17.73■□□□□ 0.43
PKP4-204ENST00000421462 RPA3P35244 121 aaPredicted RBP17.73■□□□□ 0.43
PKP4-204ENST00000421462 CWF19L1Q69YN2 538 aaKnown RBP17.73■□□□□ 0.43
PKP4-204ENST00000421462 ZNF365Q70YC5 407 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 ZNF804AQ7Z570 1209 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 NOP9Q86U38 636 aaKnown RBP17.73■□□□□ 0.43
PKP4-204ENST00000421462 SCYL3Q8IZE3 742 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 SLC7A6OSQ96CW6 309 aaPredicted RBP17.73■□□□□ 0.43
PKP4-204ENST00000421462 PKD2L1Q9P0L9 805 aa17.73■□□□□ 0.43
PKP4-204ENST00000421462 GOLGA8RI6L899 631 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 KRT36O76013 467 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 UBTFL6P0CB48 400 aaPredicted RBP17.72■□□□□ 0.43
PKP4-204ENST00000421462 SPIRE1Q08AE8 756 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 CLUL1Q15846 466 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 PKN2Q16513 984 aaKnown RBP17.72■□□□□ 0.43
PKP4-204ENST00000421462 HHATQ5VTY9 493 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 C11orf63Q6NUN7 778 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 VPS37BQ9H9H4 285 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 AGPAT3Q9NRZ7 376 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 ZMYM2Q9UBW7 1377 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 MKRN3Q13064 507 aaKnown RBP17.72■□□□□ 0.43
PKP4-204ENST00000421462 TMEM63BQ5T3F8 832 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 ASAP3Q8TDY4 903 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 FAM84AQ96KN4 292 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 KLF6Q99612 283 aaPredicted RBP17.72■□□□□ 0.43
PKP4-204ENST00000421462 PARVGQ9HBI0 331 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 SAYSD1Q9NPB0 183 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 KLHL11Q9NVR0 708 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 ANAPC7Q9UJX3 599 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 GRID1Q9ULK0 1009 aa17.72■□□□□ 0.43
PKP4-204ENST00000421462 GAS8O95995 478 aa17.71■□□□□ 0.43
PKP4-204ENST00000421462 ZCCHC18P0CG32 403 aa17.71■□□□□ 0.43
PKP4-204ENST00000421462 BFSP1Q12934 665 aa17.71■□□□□ 0.43
PKP4-204ENST00000421462 CCDC127Q96BQ5 260 aa17.71■□□□□ 0.43
PKP4-204ENST00000421462 DYDC2Q96IM9 177 aa17.71■□□□□ 0.43
PKP4-204ENST00000421462 TRABDQ9H4I3 376 aa17.71■□□□□ 0.43
PKP4-204ENST00000421462 USTQ9Y2C2 406 aa17.71■□□□□ 0.43
PKP4-204ENST00000421462 SCN7AQ01118 1682 aa17.71■□□□□ 0.43
PKP4-204ENST00000421462 IRF6O14896 467 aa17.71■□□□□ 0.43
PKP4-204ENST00000421462 ATP9AO75110 1047 aa17.71■□□□□ 0.43
PKP4-204ENST00000421462 ITIH2P19823 946 aa17.71■□□□□ 0.43
PKP4-204ENST00000421462 CDR2Q01850 454 aa17.71■□□□□ 0.43
PKP4-204ENST00000421462 SNX30Q5VWJ9 437 aa17.71■□□□□ 0.43
PKP4-204ENST00000421462 CCNJLQ8IV13 435 aa17.71■□□□□ 0.43
PKP4-204ENST00000421462 RBM15Q96T37 977 aaKnown RBP eCLIP17.71■□□□□ 0.433e-7■■■■□ 21.1
PKP4-204ENST00000421462 DDX39AO00148 427 aaKnown RBP17.7■□□□□ 0.42
PKP4-204ENST00000421462 MSH4O15457 936 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 UFL1O94874 794 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 RPS6KA3P51812 740 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 PPP3CAQ08209 521 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 SEPT7Q16181 437 aaKnown RBP17.7■□□□□ 0.42
PKP4-204ENST00000421462 IZUMO3Q5VZ72 239 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 KAZNQ674X7 775 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 ETNPPLQ8TBG4 499 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 SCG3Q8WXD2 468 aaKnown RBP17.7■□□□□ 0.42
PKP4-204ENST00000421462 VCXQ9H320 206 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 WHRNQ9P202 907 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 G3BP2Q9UN86 482 aaKnown RBP17.7■□□□□ 0.42
PKP4-204ENST00000421462 ATF5Q9Y2D1 282 aaPredicted RBP17.7■□□□□ 0.42
PKP4-204ENST00000421462 GOLGA8SH3BPF8 625 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 GOLGA8MH3BSY2 632 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 CAPN9O14815 690 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 RHBDL3P58872 404 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 KIF22Q14807 665 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 SLC1A5Q15758 541 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 DDB1Q16531 1140 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 CCDC125Q86Z20 511 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 SCOCQ9UIL1 159 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 A0A1W2PPM1 405 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 KCNA3P22001 575 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 CPA2P48052 419 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 CCNG1P51959 295 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 ZBTB16Q05516 673 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 SPARCL1Q14515 664 aa17.7■□□□□ 0.42
PKP4-204ENST00000421462 KPNB1Q14974 876 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms