RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 RHOT2Q8IXI1 618 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 TRAPPC12Q8WVT3 735 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 ZBTB10Q96DT7 871 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 EPB41L5Q9HCM4 733 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 CNTNAP2Q9UHC6 1331 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 EVPLQ92817 2033 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 NOP56O00567 594 aaKnown RBP16.53■□□□□ 0.24
LRCH3-202ENST00000414675 GZMAP12544 262 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 KRT5P13647 590 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 COPB2P35606 906 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 PDE6CP51160 858 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 GUCY2DQ02846 1103 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 TCEAL1Q15170 157 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 SLFN12LQ6IEE8 588 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 OR5B17Q8NGF7 314 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 MORC4Q8TE76 937 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 BBXQ8WY36 941 aaPredicted RBP16.53■□□□□ 0.24
LRCH3-202ENST00000414675 FAM167AQ96KS9 214 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 SPATA33Q96N06 139 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 CCDC113Q9H0I3 377 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 MROH8Q9H579 483 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 C1orf112Q9NSG2 853 aa16.53■□□□□ 0.24
LRCH3-202ENST00000414675 KIAA0391O15091 583 aaKnown RBP16.52■□□□□ 0.24
LRCH3-202ENST00000414675 MSCO60682 206 aa16.52■□□□□ 0.24
LRCH3-202ENST00000414675 ZC3H11AO75152 810 aaKnown RBP eCLIP16.52■□□□□ 0.24
LRCH3-202ENST00000414675 POTEJP0CG39 1038 aa16.52■□□□□ 0.24
LRCH3-202ENST00000414675 TNNC1P63316 161 aa16.52■□□□□ 0.24
LRCH3-202ENST00000414675 BIRC3Q13489 604 aa16.52■□□□□ 0.24
LRCH3-202ENST00000414675 CPNE8Q86YQ8 564 aa16.52■□□□□ 0.24
LRCH3-202ENST00000414675 DHX37Q8IY37 1157 aaKnown RBP16.52■□□□□ 0.24
LRCH3-202ENST00000414675 ATP8B4Q8TF62 1192 aa16.52■□□□□ 0.24
LRCH3-202ENST00000414675 CASKIN2Q8WXE0 1202 aa16.52■□□□□ 0.24
LRCH3-202ENST00000414675 ALG3Q92685 438 aa16.52■□□□□ 0.24
LRCH3-202ENST00000414675 CCDC102AQ96A19 550 aa16.52■□□□□ 0.24
LRCH3-202ENST00000414675 MPHOSPH6Q99547 160 aaKnown RBP16.52■□□□□ 0.24
LRCH3-202ENST00000414675 ACBD3Q9H3P7 528 aa16.52■□□□□ 0.24
LRCH3-202ENST00000414675 APOBEC3GQ9HC16 384 aaKnown RBP16.52■□□□□ 0.24
LRCH3-202ENST00000414675 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.52■□□□□ 0.24
LRCH3-202ENST00000414675 ALG6Q9Y672 507 aa16.52■□□□□ 0.24
LRCH3-202ENST00000414675 PLXNA1Q9UIW2 1896 aa16.52■□□□□ 0.23
LRCH3-202ENST00000414675 A0A0U1RQG5 324 aaPredicted RBP16.52■□□□□ 0.23
LRCH3-202ENST00000414675 TMEM110-MUSTN1A8MSY1 372 aa16.52■□□□□ 0.23
LRCH3-202ENST00000414675 FAM189A1O60320 539 aa16.52■□□□□ 0.23
LRCH3-202ENST00000414675 GJB1P08034 283 aa16.52■□□□□ 0.23
LRCH3-202ENST00000414675 SRGAP2CP0DJJ0 459 aa16.52■□□□□ 0.23
LRCH3-202ENST00000414675 SCP2P22307 547 aa16.52■□□□□ 0.23
LRCH3-202ENST00000414675 TNFSF9P41273 254 aa16.52■□□□□ 0.23
LRCH3-202ENST00000414675 PIK3CAP42336 1068 aa16.52■□□□□ 0.23
LRCH3-202ENST00000414675 LAMTOR4Q0VGL1 99 aa16.52■□□□□ 0.23
LRCH3-202ENST00000414675 SNAPC2Q13487 334 aa16.52■□□□□ 0.23
LRCH3-202ENST00000414675 KCNV1Q6PIU1 500 aa16.52■□□□□ 0.23
LRCH3-202ENST00000414675 ZNF668Q96K58 619 aaPredicted RBP16.52■□□□□ 0.23
LRCH3-202ENST00000414675 DDX47Q9H0S4 455 aaKnown RBP16.52■□□□□ 0.23
LRCH3-202ENST00000414675 NR2E1Q9Y466 385 aa16.52■□□□□ 0.23
LRCH3-202ENST00000414675 IGKV6-21A0A0C4DH24 114 aa16.51■□□□□ 0.23
LRCH3-202ENST00000414675 GLTPD2A6NH11 291 aa16.51■□□□□ 0.23
LRCH3-202ENST00000414675 SYF2O95926 243 aaKnown RBP16.51■□□□□ 0.23
LRCH3-202ENST00000414675 TXNP10599 105 aaKnown RBP16.51■□□□□ 0.23
LRCH3-202ENST00000414675 MARCKSL1P49006 195 aa16.51■□□□□ 0.23
LRCH3-202ENST00000414675 AARSP49588 968 aaKnown RBP eCLIP16.51■□□□□ 0.23
LRCH3-202ENST00000414675 ZNF211Q13398 564 aaPredicted RBP16.51■□□□□ 0.23
LRCH3-202ENST00000414675 GJC2Q5T442 439 aaPredicted RBP16.51■□□□□ 0.23
LRCH3-202ENST00000414675 IER5Q5VY09 327 aa16.51■□□□□ 0.23
LRCH3-202ENST00000414675 PLPPR4Q7Z2D5 763 aa16.51■□□□□ 0.23
LRCH3-202ENST00000414675 IFT20Q8IY31 132 aa16.51■□□□□ 0.23
LRCH3-202ENST00000414675 BTBD6Q96KE9 485 aa16.51■□□□□ 0.23
LRCH3-202ENST00000414675 CGRRF1Q99675 332 aa16.51■□□□□ 0.23
LRCH3-202ENST00000414675 NFU1Q9UMS0 254 aa16.51■□□□□ 0.23
LRCH3-202ENST00000414675 FAN1Q9Y2M0 1017 aa16.51■□□□□ 0.23
LRCH3-202ENST00000414675 UMODL1Q5DID0 1318 aa16.51■□□□□ 0.23
LRCH3-202ENST00000414675 AGPSO00116 658 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 KRIT1O00522 736 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 PHACTR2O75167 634 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 FAM153BP0C7A2 387 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 EPHB4P54760 987 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 FAM153CQ494X1 144 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 CDCA2Q69YH5 1023 aaPredicted RBP16.5■□□□□ 0.23
LRCH3-202ENST00000414675 C11orf63Q6NUN7 778 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 AADACL2Q6P093 401 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 ENOSF1Q7L5Y1 443 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 ZBTB33Q86T24 672 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 RNF149Q8NC42 400 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 TSEN2Q8NCE0 465 aaKnown RBP16.5■□□□□ 0.23
LRCH3-202ENST00000414675 IFT81Q8WYA0 676 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 RIN2Q8WYP3 895 aaPredicted RBP16.5■□□□□ 0.23
LRCH3-202ENST00000414675 KRT35Q92764 455 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 SLC10A4Q96EP9 437 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 CALR3Q96L12 384 aaKnown RBP16.5■□□□□ 0.23
LRCH3-202ENST00000414675 ZNF408Q9H9D4 720 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 FAM153AQ9UHL3 310 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 SCN4AP35499 1836 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 SART1O43290 800 aaKnown RBP16.5■□□□□ 0.23
LRCH3-202ENST00000414675 MTA2O94776 668 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 LDHAP00338 332 aaKnown RBP16.5■□□□□ 0.23
LRCH3-202ENST00000414675 FGGP02679 453 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 CYP1A2P05177 515 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 ACO1P21399 889 aaKnown RBP16.5■□□□□ 0.23
LRCH3-202ENST00000414675 HSP90B2PQ58FF3 399 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 NAA35Q5VZE5 725 aa16.5■□□□□ 0.23
LRCH3-202ENST00000414675 ZPBP2Q6X784 338 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms