RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TULP1O00294 542 aaPredicted RBP33.29■■■□□ 2.92
CSNK1E-206ENST00000413574 LDHAP00338 332 aaKnown RBP33.29■■■□□ 2.92
CSNK1E-206ENST00000413574 CCNE1P24864 410 aa33.29■■■□□ 2.92
CSNK1E-206ENST00000413574 STX17P56962 302 aa33.29■■■□□ 2.92
CSNK1E-206ENST00000413574 SPAG1Q07617 926 aa33.29■■■□□ 2.92
CSNK1E-206ENST00000413574 XXYLT1Q8NBI6 393 aa33.29■■■□□ 2.92
CSNK1E-206ENST00000413574 URGCPQ8TCY9 931 aa33.29■■■□□ 2.92
CSNK1E-206ENST00000413574 RPS6KC1Q96S38 1066 aa33.29■■■□□ 2.92
CSNK1E-206ENST00000413574 DNAJB2P25686 324 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 RAB30Q15771 203 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 SASS6Q6UVJ0 657 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 FIBCD1Q8N539 461 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 MLKLQ8NB16 471 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 ZMAT2Q96NC0 199 aaKnown RBP33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 SZT2Q5T011 3432 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 NLRC5Q86WI3 1866 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 TTC26A0AVF1 554 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 LACTBL1A8MY62 500 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 INPPL1O15357 1258 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 B4GALT3O60512 393 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 NR2F2P24468 414 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 PPP1R2P41236 205 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 CASP4P49662 377 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 WNT7BP56706 349 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 ZNF280BQ86YH2 543 aa33.28■■■□□ 2.92
CSNK1E-206ENST00000413574 LINC01553A4QN01 128 aa33.27■■■□□ 2.92
CSNK1E-206ENST00000413574 KIAA0391O15091 583 aaKnown RBP33.27■■■□□ 2.92
CSNK1E-206ENST00000413574 EXOC3O60645 756 aa33.27■■■□□ 2.92
CSNK1E-206ENST00000413574 XKR4Q5GH76 650 aa33.27■■■□□ 2.92
CSNK1E-206ENST00000413574 SLC9A9Q8IVB4 645 aa33.27■■■□□ 2.92
CSNK1E-206ENST00000413574 LRRC43Q8N309 656 aa33.27■■■□□ 2.92
CSNK1E-206ENST00000413574 FBXL18Q96ME1 805 aa33.27■■■□□ 2.92
CSNK1E-206ENST00000413574 CWH43Q9H720 699 aa33.27■■■□□ 2.92
CSNK1E-206ENST00000413574 RBAKQ9NYW8 714 aaPredicted RBP33.27■■■□□ 2.92
CSNK1E-206ENST00000413574 SMIM28A0A1B0GU29 152 aa33.26■■■□□ 2.91
CSNK1E-206ENST00000413574 DDHD2O94830 711 aa33.26■■■□□ 2.91
CSNK1E-206ENST00000413574 ADRB2P07550 413 aa33.26■■■□□ 2.91
CSNK1E-206ENST00000413574 RNASELQ05823 741 aaKnown RBP33.26■■■□□ 2.91
CSNK1E-206ENST00000413574 PAK1Q13153 545 aa33.26■■■□□ 2.91
CSNK1E-206ENST00000413574 SNRNP35Q16560 246 aaKnown RBP33.26■■■□□ 2.91
CSNK1E-206ENST00000413574 TSG101Q99816 390 aa33.26■■■□□ 2.91
CSNK1E-206ENST00000413574 MRPL9Q9BYD2 267 aaKnown RBP33.26■■■□□ 2.91
CSNK1E-206ENST00000413574 CNTN3Q9P232 1028 aa33.26■■■□□ 2.91
CSNK1E-206ENST00000413574 ADAM9Q13443 819 aa33.25■■■□□ 2.91
CSNK1E-206ENST00000413574 EDRF1Q3B7T1 1238 aa33.25■■■□□ 2.91
CSNK1E-206ENST00000413574 TMEM174Q8WUU8 243 aa33.25■■■□□ 2.91
CSNK1E-206ENST00000413574 MED15Q96RN5 788 aa33.25■■■□□ 2.91
CSNK1E-206ENST00000413574 ZNF233A6NK53 670 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 LINC00271P0C7V0 271 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 TAP1Q03518 808 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 PPP2R3AQ06190 1150 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 NFIL3Q16649 462 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 CEP135Q66GS9 1140 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 TTI2Q6NXR4 508 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 BRSK2Q8IWQ3 736 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 TMEM130Q8N3G9 435 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 LRCH3Q96II8 777 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 NRDE2Q9H7Z3 1164 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 PLEKHA5Q9HAU0 1116 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 KANSL3Q9P2N6 904 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 CACNG4Q9UBN1 327 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 DNAJB4Q9UDY4 337 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 SYCE3A1L190 88 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 LRRC63Q05C16 580 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 SPOUT1Q5T280 376 aaKnown RBP33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 TIFAQ96CG3 184 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 PPP1R10Q96QC0 940 aaKnown RBP33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 DUSP9Q99956 384 aaKnown RBP33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 KIAA1586Q9HCI6 787 aa33.24■■■□□ 2.91
CSNK1E-206ENST00000413574 THP07101 528 aa33.23■■■□□ 2.91
CSNK1E-206ENST00000413574 PBX3P40426 434 aa33.23■■■□□ 2.91
CSNK1E-206ENST00000413574 GRIK3Q13003 919 aa33.23■■■□□ 2.91
CSNK1E-206ENST00000413574 NAB2Q15742 525 aa33.23■■■□□ 2.91
CSNK1E-206ENST00000413574 HABP4Q5JVS0 413 aaKnown RBP33.23■■■□□ 2.91
CSNK1E-206ENST00000413574 MTUS1Q9ULD2 1270 aa33.23■■■□□ 2.91
CSNK1E-206ENST00000413574 ZC3H11AO75152 810 aaKnown RBP eCLIP33.22■■■□□ 2.91
CSNK1E-206ENST00000413574 KCNE1P15382 129 aa33.22■■■□□ 2.91
CSNK1E-206ENST00000413574 RPL13P26373 211 aaKnown RBP33.22■■■□□ 2.91
CSNK1E-206ENST00000413574 TYRO3Q06418 890 aa33.22■■■□□ 2.91
CSNK1E-206ENST00000413574 MYBPC2Q14324 1141 aa33.22■■■□□ 2.91
CSNK1E-206ENST00000413574 PPP2R2DQ66LE6 453 aa33.22■■■□□ 2.91
CSNK1E-206ENST00000413574 JADE1Q6IE81 842 aa33.22■■■□□ 2.91
CSNK1E-206ENST00000413574 C18orf25Q96B23 403 aaPredicted RBP33.22■■■□□ 2.91
CSNK1E-206ENST00000413574 C17orf80Q9BSJ5 609 aa33.22■■■□□ 2.91
CSNK1E-206ENST00000413574 SLC28A3Q9HAS3 691 aa33.22■■■□□ 2.91
CSNK1E-206ENST00000413574 PDE11AQ9HCR9 933 aa33.22■■■□□ 2.91
CSNK1E-206ENST00000413574 AKAP3O75969 853 aa33.21■■■□□ 2.91
CSNK1E-206ENST00000413574 RSPH1Q8WYR4 309 aa33.21■■■□□ 2.91
CSNK1E-206ENST00000413574 FAM84AQ96KN4 292 aa33.21■■■□□ 2.91
CSNK1E-206ENST00000413574 FAM193BQ96PV7 902 aaPredicted RBP33.21■■■□□ 2.91
CSNK1E-206ENST00000413574 CERS4Q9HA82 394 aa33.21■■■□□ 2.91
CSNK1E-206ENST00000413574 RWDD2AQ9UIY3 292 aa33.21■■■□□ 2.91
CSNK1E-206ENST00000413574 BICDL2A1A5D9 508 aa33.2■■■□□ 2.91
CSNK1E-206ENST00000413574 NFICP08651 508 aa33.2■■■□□ 2.91
CSNK1E-206ENST00000413574 SOX4Q06945 474 aaPredicted RBP33.2■■■□□ 2.91
CSNK1E-206ENST00000413574 STX1AQ16623 288 aa33.2■■■□□ 2.91
CSNK1E-206ENST00000413574 ZSCAN23Q3MJ62 389 aa33.2■■■□□ 2.91
CSNK1E-206ENST00000413574 C11orf57Q6ZUT1 292 aaPredicted RBP33.2■■■□□ 2.91
CSNK1E-206ENST00000413574 RABGGTAQ92696 567 aa33.2■■■□□ 2.91
CSNK1E-206ENST00000413574 CLP1Q92989 425 aaKnown RBP33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms