RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 CASP5P51878 434 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 SMAD1Q15797 465 aaKnown RBP6.11□□□□□ -1.43
CNGA1-202ENST00000402813 LRSAM1Q6UWE0 723 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 FAM114A1Q8IWE2 563 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 ARL14Q8N4G2 192 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 CHST13Q8NET6 341 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 PIGOQ8TEQ8 1089 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 SEPT1Q8WYJ6 367 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 HTRA1Q92743 480 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 PLD4Q96BZ4 506 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 TCEANC2Q96MN5 208 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 TSEN34Q9BSV6 310 aaKnown RBP6.11□□□□□ -1.43
CNGA1-202ENST00000402813 BCO2Q9BYV7 579 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 INTS2Q9H0H0 1204 aaKnown RBP6.11□□□□□ -1.43
CNGA1-202ENST00000402813 MAGEH1Q9H213 219 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 MTRF1LQ9UGC7 380 aaKnown RBP6.11□□□□□ -1.43
CNGA1-202ENST00000402813 WDR19Q8NEZ3 1342 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 ROBO2Q9HCK4 1378 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 ARHGEF40Q8TER5 1519 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 ABCA6Q8N139 1617 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 H0YIV9 168 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 VWA5AO00534 786 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 TRPA1O75762 1119 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 HPGDP15428 266 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 TARSP26639 723 aaKnown RBP6.11□□□□□ -1.43
CNGA1-202ENST00000402813 GDI1P31150 447 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 GPC1P35052 558 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 DR1Q01658 176 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 GABPB1Q06547 395 aaPredicted RBP6.11□□□□□ -1.43
CNGA1-202ENST00000402813 BTG3Q14201 252 aaPredicted RBP6.11□□□□□ -1.43
CNGA1-202ENST00000402813 FAM110CQ1W6H9 321 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 FLYWCH1Q4VC44 716 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 C1orf141Q5JVX7 400 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 TMEM132EQ6IEE7 984 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 RAB11FIP4Q86YS3 637 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 FAM9CQ8IZT9 166 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 RAPGEF5Q92565 580 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 CNOT6LQ96LI5 555 aaKnown RBP6.11□□□□□ -1.43
CNGA1-202ENST00000402813 KCNK17Q96T54 332 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 AGXT2Q9BYV1 514 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 TMEM60Q9H2L4 133 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 TASP1Q9H6P5 420 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 PREBQ9HCU5 417 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 CROTQ9UKG9 612 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 ITGB1BP2Q9UKP3 347 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 PNMA3Q9UL41 463 aa6.11□□□□□ -1.43
CNGA1-202ENST00000402813 TNPO3Q9Y5L0 923 aaKnown RBP6.11□□□□□ -1.43
CNGA1-202ENST00000402813 SCAF11Q99590 1463 aaKnown RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 ZNF521Q96K83 1311 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 H7C1W4 665 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 NCK2O43639 380 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 S100A9P06702 114 aaKnown RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 ARPC4P59998 168 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 DMPKQ09013 629 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 C19orf57Q0VDD7 668 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 MPP3Q13368 585 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 ACVR2BQ13705 512 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 IDI1Q13907 227 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 C2orf76Q3KRA6 126 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 ATAT1Q5SQI0 421 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 SNAP47Q5SQN1 464 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 PGBD2Q6P3X8 592 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 SH3BP5LQ7L8J4 393 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 PIWIL3Q7Z3Z3 882 aaKnown RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 CPOQ8IVL8 374 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 TMCO5AQ8N6Q1 288 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 LILRB4Q8NHJ6 448 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 BCAS4Q8TDM0 211 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 HERVK_113Q902F9 699 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 LTV1Q96GA3 475 aaPredicted RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 MYO19Q96H55 970 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 CMTM3Q96MX0 182 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 GAS2L1Q99501 681 aaPredicted RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 EPN3Q9H201 632 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 SERHL2Q9H4I8 314 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 DENND2DQ9H6A0 471 aaPredicted RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 USP36Q9P275 1121 aaKnown RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 TTC41PQ6P2S7 1318 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 GOLGA6L7A0A1B0GV03 622 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 PSMD9O00233 223 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 SYNCRIPO60506 623 aaKnown RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 TUSC2O75896 110 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 F12P00748 615 aaPredicted RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 ENDOUP21128 410 aaKnown RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 IL10P22301 178 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 MAP2K2P36507 400 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 CDR1P51861 262 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 CACNB3P54284 484 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 CYP4F8P98187 520 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 TRAP1Q12931 704 aaKnown RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 FBXO47Q5MNV8 452 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 NAA16Q6N069 864 aaPredicted RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 SLFN11Q7Z7L1 901 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 CAND1Q86VP6 1230 aaKnown RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 VSIG10LQ86VR7 867 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 VWA5B2Q8N398 1253 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 XXYLT1Q8NBI6 393 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 SH3RF3Q8TEJ3 882 aaPredicted RBP6.1□□□□□ -1.43
CNGA1-202ENST00000402813 WASF1Q92558 559 aa6.1□□□□□ -1.43
CNGA1-202ENST00000402813 AK8Q96MA6 479 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms