RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 FAM151AQ8WW52 585 aa13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 ATG4CQ96DT6 458 aa13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 NSRP1Q9H0G5 558 aaKnown RBP13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 NKIRAS1Q9NYS0 192 aa13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 ADAM22Q9P0K1 906 aa13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 FEM1BQ9UK73 627 aa13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 MYH11P35749 1972 aa13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 LOC102724159A0A0B4J2E5 919 aa13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 SCTRP47872 440 aa13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 MRPS9P82933 396 aaKnown RBP13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 FMO1Q01740 532 aa13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 PWP2Q15269 919 aaKnown RBP13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 SNCBQ16143 134 aa13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 SYTL5Q8TDW5 730 aaPredicted RBP13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 HOMER3Q9NSC5 361 aa13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 PARP2Q9UGN5 583 aa13.53□□□□□ -0.24
PPP4R1-202ENST00000400555 CHRNB2P17787 502 aa13.52□□□□□ -0.24
PPP4R1-202ENST00000400555 MARK3P27448 753 aa13.52□□□□□ -0.24
PPP4R1-202ENST00000400555 PSMC5P62195 406 aa13.52□□□□□ -0.24
PPP4R1-202ENST00000400555 STRN3Q13033 797 aa13.52□□□□□ -0.24
PPP4R1-202ENST00000400555 FMNL3Q8IVF7 1028 aa13.52□□□□□ -0.24
PPP4R1-202ENST00000400555 ZC3H3Q8IXZ2 948 aaKnown RBP13.52□□□□□ -0.24
PPP4R1-202ENST00000400555 NIM1KQ8IY84 436 aa13.52□□□□□ -0.24
PPP4R1-202ENST00000400555 RIT2Q99578 217 aa13.52□□□□□ -0.24
PPP4R1-202ENST00000400555 WNT8AQ9H1J5 351 aa13.52□□□□□ -0.24
PPP4R1-202ENST00000400555 RNF146Q9NTX7 359 aa13.52□□□□□ -0.24
PPP4R1-202ENST00000400555 WDR64B1ANS9 1081 aa13.52□□□□□ -0.25
PPP4R1-202ENST00000400555 KIF22Q14807 665 aa13.52□□□□□ -0.25
PPP4R1-202ENST00000400555 RSBN1LQ6PCB5 846 aaPredicted RBP13.52□□□□□ -0.25
PPP4R1-202ENST00000400555 ZDHHC24Q6UX98 284 aa13.52□□□□□ -0.25
PPP4R1-202ENST00000400555 USP37Q86T82 979 aa13.52□□□□□ -0.25
PPP4R1-202ENST00000400555 MCF2L2Q86YR7 1114 aa13.52□□□□□ -0.25
PPP4R1-202ENST00000400555 CNOT10Q9H9A5 744 aaKnown RBP13.52□□□□□ -0.25
PPP4R1-202ENST00000400555 AGO4Q9HCK5 861 aaKnown RBP13.52□□□□□ -0.25
PPP4R1-202ENST00000400555 KRT19P08727 400 aa13.52□□□□□ -0.25
PPP4R1-202ENST00000400555 ADCY2Q08462 1091 aa13.52□□□□□ -0.25
PPP4R1-202ENST00000400555 RPAP3Q9H6T3 665 aaPredicted RBP13.52□□□□□ -0.25
PPP4R1-202ENST00000400555 ALG13Q9NP73 1137 aaKnown RBP13.52□□□□□ -0.25
PPP4R1-202ENST00000400555 DMAC2Q9NW81 257 aa13.52□□□□□ -0.25
PPP4R1-202ENST00000400555 R3HDM2Q9Y2K5 976 aaKnown RBP13.52□□□□□ -0.25
PPP4R1-202ENST00000400555 PIK3CDO00329 1044 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 RIPK2O43353 540 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 PPFIA2O75334 1257 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 ZSCAN5DPP0CG00 497 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 CETN2P41208 172 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 SNRNP48Q6IEG0 339 aaKnown RBP13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 SAMD7Q7Z3H4 446 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 DEPTORQ8TB45 409 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 PARD3BQ8TEW8 1205 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 STMN4Q9H169 189 aaPredicted RBP13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 SYNCQ9H7C4 482 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 CES2O00748 559 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 GH1P01241 217 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 SLMAPQ14BN4 828 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 BTNL9Q6UXG8 535 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 CCDC91Q7Z6B0 441 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 BSNDQ8WZ55 320 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 ZKSCAN4Q969J2 545 aaPredicted RBP13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 SAYSD1Q9NPB0 183 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 ABCF3Q9NUQ8 709 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 CEP83Q9Y592 693 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 LAMB2P55268 1798 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 PIK3R2O00459 728 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 CCNE2O96020 404 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 CFHP08603 1231 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 SRGAP2CP0DJJ0 459 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 ADSSP30520 456 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 ORC1Q13415 861 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 ANKRD20A8PQ5CZ79 823 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 CYB5D1Q6P9G0 228 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 PARP9Q8IXQ6 854 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 JDP2Q8WYK2 163 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 WNK4Q96J92 1243 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 IWS1Q96ST2 819 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 POLR3FQ9H1D9 316 aaPredicted RBP13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 GRHL1Q9NZI5 618 aa13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 NXF1Q9UBU9 619 aaKnown RBP13.51□□□□□ -0.25
PPP4R1-202ENST00000400555 NCANO14594 1321 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 EZRP15311 586 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 DRD4P21917 467 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 CDR2Q01850 454 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 LIN9Q5TKA1 542 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 C4orf33Q8N1A6 199 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.5□□□□□ -0.253e-9■■■■■ 80.2
PPP4R1-202ENST00000400555 CCDC77Q9BR77 488 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 TARS2Q9BW92 718 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 FAM129AQ9BZQ8 928 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 RANBP17Q9H2T7 1088 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 ZDHHC18Q9NUE0 388 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 AGTPBP1Q9UPW5 1226 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 DIS3Q9Y2L1 958 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 RIPK3Q9Y572 518 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 RPTORQ8N122 1335 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 LRRD1A4D1F6 860 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 TLR3O15455 904 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 ICAM1P05362 532 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 ETS1P14921 441 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 ANXA13P27216 316 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 HMGCS2P54868 508 aa13.5□□□□□ -0.25
PPP4R1-202ENST00000400555 EN1Q05925 392 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms