RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 IKZF4Q9H2S9 585 aa9.17□□□□□ -0.94
BRCC3-205ENST00000399026 CUEDC2Q9H467 287 aa9.17□□□□□ -0.94
BRCC3-205ENST00000399026 CWH43Q9H720 699 aa9.17□□□□□ -0.94
BRCC3-205ENST00000399026 TYW1Q9NV66 732 aaKnown RBP9.17□□□□□ -0.94
BRCC3-205ENST00000399026 TBC1D13Q9NVG8 400 aa9.17□□□□□ -0.94
BRCC3-205ENST00000399026 KBTBD4Q9NVX7 518 aa9.17□□□□□ -0.94
BRCC3-205ENST00000399026 SNTG2Q9NY99 539 aa9.17□□□□□ -0.94
BRCC3-205ENST00000399026 CHMP5Q9NZZ3 219 aa9.17□□□□□ -0.94
BRCC3-205ENST00000399026 KLK14Q9P0G3 267 aa9.17□□□□□ -0.94
BRCC3-205ENST00000399026 HPSEQ9Y251 543 aa9.17□□□□□ -0.94
BRCC3-205ENST00000399026 GDAQ9Y2T3 454 aa9.17□□□□□ -0.94
BRCC3-205ENST00000399026 CITO14578 2027 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 A0A1W2PQ27 194 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 A0A1W2PQ64 194 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 A0A1W2PQD8 194 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 FRMD3A2A2Y4 597 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 ABLIM1O14639 778 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 HNRNPDLO14979 420 aaKnown RBP9.16□□□□□ -0.94
BRCC3-205ENST00000399026 LPXNO60711 386 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 ZNF623O75123 536 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 ZC3H11AO75152 810 aaKnown RBP eCLIP9.16□□□□□ -0.94
BRCC3-205ENST00000399026 OFD1O75665 1012 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 RECQL4O94761 1208 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 EOMESO95936 686 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 POMCP01189 267 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 SKIP12755 728 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 MATR3P43243 847 aaKnown RBP eCLIP9.16□□□□□ -0.941e-6■■■■□ 22.8
BRCC3-205ENST00000399026 SYKP43405 635 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 OSTNP61366 133 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 CUL4BQ13620 913 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 NOLC1Q14978 699 aaKnown RBP eCLIP9.16□□□□□ -0.94
BRCC3-205ENST00000399026 DCAF4L1Q3SXM0 396 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 NOMO2Q5JPE7 1267 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 GLB1LQ6UWU2 654 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 MPZL3Q6UWV2 235 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 MRPL10Q7Z7H8 261 aaKnown RBP9.16□□□□□ -0.94
BRCC3-205ENST00000399026 MAP4K3Q8IVH8 894 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 PARP9Q8IXQ6 854 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 CEP57L1Q8IYX8 460 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 COLGALT1Q8NBJ5 622 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 GLIS3Q8NEA6 775 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 CLP1Q92989 425 aaKnown RBP9.16□□□□□ -0.94
BRCC3-205ENST00000399026 PGBD4Q96DM1 585 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 GAD1Q99259 594 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 MRPL9Q9BYD2 267 aaKnown RBP9.16□□□□□ -0.94
BRCC3-205ENST00000399026 CXCL16Q9H2A7 254 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 MRPL44Q9H9J2 332 aaKnown RBP9.16□□□□□ -0.94
BRCC3-205ENST00000399026 MAGEF1Q9HAY2 307 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 PANK4Q9NVE7 773 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 CACNG4Q9UBN1 327 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 PARP2Q9UGN5 583 aa9.16□□□□□ -0.94
BRCC3-205ENST00000399026 TRIP11Q15643 1979 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 ANK1P16157 1881 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 FAM237AA0A1B0GTK4 181 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 ARL5CA6NH57 179 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 H0YCG3 227 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 GCNT3O95395 438 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 SLFN14P0C7P3 912 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 GAP43P17677 238 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 LAG3P18627 525 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 PROZP22891 400 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 LIG4P49917 911 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 RNASELQ05823 741 aaKnown RBP9.15□□□□□ -0.94
BRCC3-205ENST00000399026 KCNA1Q09470 495 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 GPM6BQ13491 265 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 SEZ6Q53EL9 994 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 HERC4Q5GLZ8 1057 aaPredicted RBP9.15□□□□□ -0.94
BRCC3-205ENST00000399026 GLRA4Q5JXX5 417 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 SLC39A4Q6P5W5 647 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 FAM43BQ6ZT52 329 aaPredicted RBP9.15□□□□□ -0.94
BRCC3-205ENST00000399026 TMEM173Q86WV6 379 aaPredicted RBP9.15□□□□□ -0.94
BRCC3-205ENST00000399026 THNSL1Q8IYQ7 743 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 KLHL23Q8NBE8 558 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 URGCPQ8TCY9 931 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 PPM1EQ8WY54 764 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 PAGE5Q96GU1 130 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 SAMD11Q96NU1 681 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 RPS6KC1Q96S38 1066 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 C11orf84Q9BUA3 381 aaPredicted RBP9.15□□□□□ -0.94
BRCC3-205ENST00000399026 HAPLN2Q9GZV7 340 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 PTPRHQ9HD43 1115 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 ALG13Q9NP73 1137 aaKnown RBP9.15□□□□□ -0.94
BRCC3-205ENST00000399026 DNAJB4Q9UDY4 337 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 TBX20Q9UMR3 447 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 PLAGL2Q9UPG8 496 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 TNFSF13BQ9Y275 285 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 RWDD3Q9Y3V2 267 aa9.15□□□□□ -0.94
BRCC3-205ENST00000399026 ZMYM2Q9UBW7 1377 aa9.14□□□□□ -0.95
BRCC3-205ENST00000399026 GOLGA6L4A6NEF3 574 aa9.14□□□□□ -0.95
BRCC3-205ENST00000399026 NT5C1B-RDH14C9J2C7 533 aa9.14□□□□□ -0.95
BRCC3-205ENST00000399026 ANKRD63C9JTQ0 380 aa9.14□□□□□ -0.95
BRCC3-205ENST00000399026 F8W810 466 aa9.14□□□□□ -0.95
BRCC3-205ENST00000399026 H3BNC9 293 aa9.14□□□□□ -0.95
BRCC3-205ENST00000399026 GRM6O15303 877 aa9.14□□□□□ -0.95
BRCC3-205ENST00000399026 ST8SIA5O15466 376 aa9.14□□□□□ -0.95
BRCC3-205ENST00000399026 GADD45BO75293 160 aaPredicted RBP9.14□□□□□ -0.95
BRCC3-205ENST00000399026 DDHD2O94830 711 aa9.14□□□□□ -0.95
BRCC3-205ENST00000399026 PRPF6O94906 941 aaKnown RBP9.14□□□□□ -0.95
BRCC3-205ENST00000399026 ITGB1P05556 798 aa9.14□□□□□ -0.95
BRCC3-205ENST00000399026 BMPR1AP36894 532 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms