RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 OSTNP61366 133 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 FAM171A1Q5VUB5 890 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 PDXDC1Q6P996 788 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 CEP57Q86XR8 500 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 PALB2Q86YC2 1186 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 MYCT1Q8N699 235 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 TMEM161BQ8NDZ6 487 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 HASPINQ8TF76 798 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 BICD1Q96G01 975 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 B3GALT6Q96L58 329 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 PAAF1Q9BRP4 392 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 TTPALQ9BTX7 342 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 ZHX3Q9H4I2 956 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 ZSCAN16Q9H4T2 348 aaPredicted RBP15.06■□□□□ 0
CXCL12-205ENST00000395794 PTPRHQ9HD43 1115 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 MAN1C1Q9NR34 630 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 SLC38A7Q9NVC3 462 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 FNIP2Q9P278 1114 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 ANKFY1Q9P2R3 1169 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 CCDC39Q9UFE4 941 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 CLIC4Q9Y696 253 aa15.06■□□□□ 0
CXCL12-205ENST00000395794 NPHP3-ACAD11A0A0J9YXS1 232 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 CLDN3O15551 220 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 TRAPPC3O43617 180 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 TBCAO75347 108 aaKnown RBP15.05■□□□□ -0
CXCL12-205ENST00000395794 B3GAT3O94766 335 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 KIF4AO95239 1232 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 HSP90AA1P07900 732 aaKnown RBP15.05■□□□□ -0
CXCL12-205ENST00000395794 MAPTP10636 758 aaKnown RBP15.05■□□□□ -0
CXCL12-205ENST00000395794 PLCG1P19174 1290 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 KARSQ15046 597 aaKnown RBP15.05■□□□□ -0
CXCL12-205ENST00000395794 ARSHQ5FYA8 562 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 GLRA4Q5JXX5 417 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 KANK3Q6NY19 840 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 DCLRE1AQ6PJP8 1040 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 CYP26C1Q6V0L0 522 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 ZPBP2Q6X784 338 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 C15orf39Q6ZRI6 1047 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 GPR149Q86SP6 731 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 PLCD3Q8N3E9 789 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 TDRD5Q8NAT2 981 aaKnown RBP15.05■□□□□ -0
CXCL12-205ENST00000395794 HDAC7Q8WUI4 952 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 RAD54LQ92698 747 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 ACSF2Q96CM8 615 aaPredicted RBP15.05■□□□□ -0
CXCL12-205ENST00000395794 DDX27Q96GQ7 796 aaKnown RBP15.05■□□□□ -0
CXCL12-205ENST00000395794 PLEKHA4Q9H4M7 779 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 PARVGQ9HBI0 331 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 CACNG4Q9UBN1 327 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 CDH22Q9UJ99 828 aa15.05■□□□□ -0
CXCL12-205ENST00000395794 SMIM28A0A1B0GU29 152 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 BRD1O95696 1058 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 MARCKSP29966 332 aaPredicted RBP15.04■□□□□ -0
CXCL12-205ENST00000395794 ABCD1P33897 745 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 DDIT3P35638 169 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 ZXDAP98168 799 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 CEBPZQ03701 1054 aaKnown RBP15.04■□□□□ -0
CXCL12-205ENST00000395794 GRIN1Q05586 938 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 RESTQ13127 1097 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 MCM6Q14566 821 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 NOLC1Q14978 699 aaKnown RBP eCLIP15.04■□□□□ -0
CXCL12-205ENST00000395794 PTPN21Q16825 1174 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 CCDC149Q6ZUS6 474 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 TAS1R3Q7RTX0 852 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 HAUS6Q7Z4H7 955 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 GLYCTKQ8IVS8 523 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 KRI1Q8N9T8 703 aaKnown RBP15.04■□□□□ -0
CXCL12-205ENST00000395794 CMASQ8NFW8 434 aaPredicted RBP15.04■□□□□ -0
CXCL12-205ENST00000395794 LARP4BQ92615 738 aaKnown RBP15.04■□□□□ -0
CXCL12-205ENST00000395794 MFSD14AQ96MC6 490 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 PPP1R10Q96QC0 940 aaKnown RBP15.04■□□□□ -0
CXCL12-205ENST00000395794 REEP2Q9BRK0 252 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 CCSER1Q9C0I3 900 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 CXCL16Q9H2A7 254 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 PIDD1Q9HB75 910 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 USTQ9Y2C2 406 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 C5orf42Q9H799 3197 aa15.04■□□□□ -0
CXCL12-205ENST00000395794 CCDC195A0A1B0GUA6 201 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 K7ENM7 598 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 TGM5O43548 720 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 STX6O43752 255 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 GABBR2O75899 941 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 SPATA31D3P0C874 917 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 PROZP22891 400 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 LIG4P49917 911 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 CLCNKBP51801 687 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 NCKAP1LP55160 1127 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 PTPAQ15257 358 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 NAB2Q15742 525 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 PSMD5Q16401 504 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 RTP2Q5QGT7 225 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 PRSS55Q6UWB4 352 aaPredicted RBP15.03■□□□□ -0
CXCL12-205ENST00000395794 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.03■□□□□ -0
CXCL12-205ENST00000395794 TRIM67Q6ZTA4 783 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 SPATA31D4Q6ZUB0 917 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 OTOP3Q7RTS5 596 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 HSCBQ8IWL3 235 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 CEP120Q8N960 986 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 BLOC1S4Q9NUP1 217 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 RAPGEFL1Q9UHV5 662 aa15.03■□□□□ -0
CXCL12-205ENST00000395794 SRPRBQ9Y5M8 271 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms