RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 SLC20A1Q8WUM9 679 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 NUDCD1Q96RS6 583 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 CBWD1Q9BRT8 395 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 SPON2Q9BUD6 331 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 RAB6BQ9NRW1 208 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 CPSF3Q9UKF6 684 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 SNX9Q9Y5X1 595 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 CLTCQ00610 1675 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 IQANK1A0A1B0GTG1 560 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 CTIFO43310 598 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 SASH3O75995 380 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 KRT80Q6KB66 452 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 NUDCD3Q8IVD9 361 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 SLC17A8Q8NDX2 589 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 NSUN6Q8TEA1 469 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 PSPC1Q8WXF1 523 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 FUT8Q9BYC5 575 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 C10orf88Q9H8K7 445 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 KLK14Q9P0G3 267 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 INO80Q9ULG1 1556 aaPredicted RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 SPTLC1O15269 473 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 EYA4O95677 639 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 CDR2Q01850 454 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 KCNB1Q14721 858 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 GRIK5Q16478 980 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 PID1Q7Z2X4 250 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 CBWD2Q8IUF1 395 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 CLMNQ96JQ2 1002 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 C7orf25Q9BPX7 421 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 POLLQ9UGP5 575 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 ABT1Q9ULW3 272 aaKnown RBP5.29□□□□□ -1.56
LTN1-202ENST00000389194 AGAP1Q9UPQ3 857 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 PCDHAC2Q9Y5I4 1007 aa5.29□□□□□ -1.56
LTN1-202ENST00000389194 UBA6A0AVT1 1052 aaPredicted RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 hCG_1984214I3L0E3 225 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 ARP10275 920 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 RALAP11233 206 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 KCNA1Q09470 495 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 PCSK7Q16549 785 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 DAB2IPQ5VWQ8 1189 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 PODNQ7Z5L7 613 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 GPD1LQ8N335 351 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 ZNF713Q8N859 430 aaPredicted RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 AFG1LQ8WV93 481 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 PGBD4Q96DM1 585 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 FSD1LQ9BXM9 530 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 TRABDQ9H4I3 376 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 PCMTD2Q9NV79 361 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 SCOCQ9UIL1 159 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 UNC13BO14795 1591 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 TMEM120BA0PK00 339 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 FAM153BP0C7A2 387 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 ARFIP2P53365 341 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 FAM153CQ494X1 144 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 PAN2Q504Q3 1202 aaKnown RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 FAM117BQ6P1L5 589 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 LAYNQ6UX15 382 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 RSPH3Q86UC2 560 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 LRRN4Q8WUT4 740 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 KCNB2Q92953 911 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 ERP27Q96DN0 273 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 SGF29Q96ES7 293 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 SNF8Q96H20 258 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 SEC16BQ96JE7 1060 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 TAAR1Q96RJ0 339 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 KLC2Q9H0B6 622 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 TRPV6Q9H1D0 765 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 IL1RL2Q9HB29 575 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 JPH1Q9HDC5 661 aaPredicted RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 FAM153AQ9UHL3 310 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 WDR19Q8NEZ3 1342 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 WNT7AO00755 349 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 EIF3HO15372 352 aaKnown RBP eCLIP5.28□□□□□ -1.56
LTN1-202ENST00000389194 GLI1P08151 1106 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 SDC4P31431 198 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 HSD17B3P37058 310 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 ITGA8P53708 1063 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 STX1BP61266 288 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 BTKQ06187 659 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 TRIM28Q13263 835 aaKnown RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 NTRK3Q16288 839 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 PKN1Q16512 942 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 FASTKD1Q53R41 847 aaKnown RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 BARGINQ6ZT62 677 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 IFNEQ86WN2 208 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 JAMLQ86YT9 394 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 FLAD1Q8NFF5 587 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 GABPB2Q8TAK5 448 aaPredicted RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 ANKS1AQ92625 1134 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 PRMT6Q96LA8 375 aaPredicted RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 CEP41Q9BYV8 373 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 PCDHA10Q9Y5I2 948 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 PSMD14O00487 310 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 SKAP2O75563 359 aaPredicted RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 HAUS5O94927 633 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 GGPS1O95749 300 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 TARSP26639 723 aaKnown RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 TYK2P29597 1187 aa5.28□□□□□ -1.56
LTN1-202ENST00000389194 GNL1P36915 607 aaPredicted RBP5.28□□□□□ -1.56
LTN1-202ENST00000389194 GCLCP48506 637 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms