RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 CDH16O75309 829 aa12.4□□□□□ -0.43
COPA-202ENST00000368069 COILP38432 576 aaPredicted RBP12.4□□□□□ -0.43
COPA-202ENST00000368069 MAPK7Q13164 816 aa12.4□□□□□ -0.43
COPA-202ENST00000368069 KYNUQ16719 465 aa12.4□□□□□ -0.43
COPA-202ENST00000368069 DUOXA2Q1HG44 320 aa12.4□□□□□ -0.43
COPA-202ENST00000368069 KCNV2Q8TDN2 545 aa12.4□□□□□ -0.43
COPA-202ENST00000368069 RPS6KC1Q96S38 1066 aa12.4□□□□□ -0.43
COPA-202ENST00000368069 TRABDQ9H4I3 376 aa12.4□□□□□ -0.43
COPA-202ENST00000368069 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.43
COPA-202ENST00000368069 GYG2O15488 501 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 NR3C2P08235 984 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 TAL1P17542 331 aaPredicted RBP12.39□□□□□ -0.43
COPA-202ENST00000368069 CIITAP33076 1130 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 SHMT1P34896 483 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 MKRN3Q13064 507 aaKnown RBP12.39□□□□□ -0.43
COPA-202ENST00000368069 RPS6KA2Q15349 733 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 Q4G0T1 1027 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 XKR3Q5GH77 459 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 RPAINQ86UA6 219 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 CREG2Q8IUH2 290 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 CRLF3Q8IUI8 442 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 RBBP8NLQ8NC74 664 aaPredicted RBP12.39□□□□□ -0.43
COPA-202ENST00000368069 MYCBPAPQ8TBZ2 947 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 LPAR1Q92633 364 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 ARL2BPQ9Y2Y0 163 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 F8VZ95 297 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 KRT38O76015 456 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 HAUS5O94927 633 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 HLA-DRAP01903 254 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 SLC13A5Q86YT5 568 aaPredicted RBP12.39□□□□□ -0.43
COPA-202ENST00000368069 TMEM139Q8IV31 216 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 SPATA20Q8TB22 786 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 C18orf8Q96DM3 657 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 BTBD6Q96KE9 485 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 TMEM39BQ9GZU3 492 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 SIK3Q9Y2K2 1263 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 DDTLA6NHG4 134 aaPredicted RBP12.39□□□□□ -0.43
COPA-202ENST00000368069 ARP10275 920 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 HIF1AQ16665 826 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 FAM102AQ5T9C2 384 aaPredicted RBP12.39□□□□□ -0.43
COPA-202ENST00000368069 WDR59Q6PJI9 974 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 SIX6OS1Q8N1H7 587 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 OSBPL8Q9BZF1 889 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 FAM49AQ9H0Q0 323 aaPredicted RBP12.39□□□□□ -0.43
COPA-202ENST00000368069 C2orf40Q9H1Z8 148 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 TMBIM4Q9HC24 238 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 AIPL1Q9NZN9 384 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 GTF3C4Q9UKN8 822 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 SCAF8Q9UPN6 1271 aaKnown RBP12.39□□□□□ -0.43
COPA-202ENST00000368069 PCDHB2Q9Y5E7 798 aa12.39□□□□□ -0.43
COPA-202ENST00000368069 SGPL1O95470 568 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 PHKA2P46019 1235 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 ITGA8P53708 1063 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 FUT2Q10981 343 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 Q3C1V9 767 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 RASIP1Q5U651 963 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 GRAMD1AQ96CP6 724 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 USP15Q9Y4E8 981 aaPredicted RBP12.38□□□□□ -0.43
COPA-202ENST00000368069 TMEM120BA0PK00 339 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 PDE2AO00408 941 aaPredicted RBP12.38□□□□□ -0.43
COPA-202ENST00000368069 SKIP12755 728 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 NCF2P19878 526 aaPredicted RBP12.38□□□□□ -0.43
COPA-202ENST00000368069 ROR1Q01973 937 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 RSBN1LQ6PCB5 846 aaPredicted RBP12.38□□□□□ -0.43
COPA-202ENST00000368069 RCOR2Q8IZ40 523 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 GLIS3Q8NEA6 775 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 ZDHHC15Q96MV8 337 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 MTMR9Q96QG7 549 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 SENP7Q9BQF6 1050 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 CBWD1Q9BRT8 395 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 CYP26B1Q9NR63 512 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 G3BP2Q9UN86 482 aaKnown RBP12.38□□□□□ -0.43
COPA-202ENST00000368069 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 KIAA0391O15091 583 aaKnown RBP12.38□□□□□ -0.43
COPA-202ENST00000368069 MAP3K7O43318 606 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 LPXNO60711 386 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 CNGA1P29973 690 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 SDC4P31431 198 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 AP3M2P53677 418 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 TNFAIP2Q03169 654 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 NCOA4Q13772 614 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 COG2Q14746 738 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 GRIK5Q16478 980 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 SLC30A10Q6XR72 485 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 AENQ8WTP8 325 aaKnown RBP12.38□□□□□ -0.43
COPA-202ENST00000368069 EHD4Q9H223 541 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 PABPC3Q9H361 631 aaKnown RBP12.38□□□□□ -0.43
COPA-202ENST00000368069 GPRC5CQ9NQ84 441 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 PFDN4Q9NQP4 134 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 TLK1Q9UKI8 766 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 CCDC195A0A1B0GUA6 201 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 SMIM24O75264 130 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 GPC4O75487 556 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 ABL1P00519 1130 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 ARFIP2P53365 341 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 PRKCEQ02156 737 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 TAP1Q03518 808 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 SH2D4BQ5SQS7 431 aa12.38□□□□□ -0.43
COPA-202ENST00000368069 ZC3H18Q86VM9 953 aaKnown RBP12.38□□□□□ -0.43
COPA-202ENST00000368069 RNF149Q8NC42 400 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms