RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 COL4A4P53420 1690 aaPredicted RBP20.67■□□□□ 0.9
MRPL54-201ENST00000330133 SMIM28A0A1B0GU29 152 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 TISP43B9A030 160 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 IRS1P35568 1242 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 ERVFC1P60507 584 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 FAM160A1Q05DH4 1040 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 EHHADHQ08426 723 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 PSMD2Q13200 908 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 GLRA4Q5JXX5 417 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 TMEM173Q86WV6 379 aaPredicted RBP20.66■□□□□ 0.9
MRPL54-201ENST00000330133 ZNF507Q8TCN5 953 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 TCF25Q9BQ70 676 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 IKZF4Q9H2S9 585 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 RPF1Q9H9Y2 349 aaKnown RBP20.66■□□□□ 0.9
MRPL54-201ENST00000330133 SLC39A2Q9NP94 309 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 NGRNQ9NPE2 291 aaKnown RBP20.66■□□□□ 0.9
MRPL54-201ENST00000330133 SLC38A7Q9NVC3 462 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 CNTN3Q9P232 1028 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 TCHHQ07283 1943 aa20.66■□□□□ 0.9
MRPL54-201ENST00000330133 CASTOR2A6NHX0 329 aa20.65■□□□□ 0.9
MRPL54-201ENST00000330133 FSCN2O14926 492 aa20.65■□□□□ 0.9
MRPL54-201ENST00000330133 KLRC4O43908 158 aa20.65■□□□□ 0.9
MRPL54-201ENST00000330133 RPN1P04843 607 aaKnown RBP20.65■□□□□ 0.9
MRPL54-201ENST00000330133 KCNE1P15382 129 aa20.65■□□□□ 0.9
MRPL54-201ENST00000330133 SLC10A6Q3KNW5 377 aa20.65■□□□□ 0.9
MRPL54-201ENST00000330133 KMT5BQ4FZB7 885 aa20.65■□□□□ 0.9
MRPL54-201ENST00000330133 PLPP4Q5VZY2 271 aa20.65■□□□□ 0.9
MRPL54-201ENST00000330133 EPM2AIP1Q7L775 607 aaPredicted RBP20.65■□□□□ 0.9
MRPL54-201ENST00000330133 VPS52Q8N1B4 723 aa20.65■□□□□ 0.9
MRPL54-201ENST00000330133 GLIS3Q8NEA6 775 aa20.65■□□□□ 0.9
MRPL54-201ENST00000330133 BCL7CQ8WUZ0 217 aaPredicted RBP20.65■□□□□ 0.9
MRPL54-201ENST00000330133 PPP1R10Q96QC0 940 aaKnown RBP20.65■□□□□ 0.9
MRPL54-201ENST00000330133 UBE4BO95155 1302 aa20.64■□□□□ 0.89
MRPL54-201ENST00000330133 TADA2AO75478 443 aa20.64■□□□□ 0.89
MRPL54-201ENST00000330133 CXCL14O95715 111 aa20.64■□□□□ 0.89
MRPL54-201ENST00000330133 PRR29P0C7W0 189 aa20.64■□□□□ 0.89
MRPL54-201ENST00000330133 CXCL8P10145 99 aa20.64■□□□□ 0.89
MRPL54-201ENST00000330133 GARTP22102 1010 aa20.64■□□□□ 0.89
MRPL54-201ENST00000330133 TNFSF9P41273 254 aa20.64■□□□□ 0.89
MRPL54-201ENST00000330133 PPP2R3AQ06190 1150 aa20.64■□□□□ 0.89
MRPL54-201ENST00000330133 HSP90AA2PQ14568 343 aaPredicted RBP20.64■□□□□ 0.89
MRPL54-201ENST00000330133 SMC1AQ14683 1233 aaKnown RBP20.64■□□□□ 0.89
MRPL54-201ENST00000330133 NAB2Q15742 525 aa20.64■□□□□ 0.89
MRPL54-201ENST00000330133 ENGASEQ8NFI3 743 aa20.64■□□□□ 0.89
MRPL54-201ENST00000330133 UROC1Q96N76 676 aa20.64■□□□□ 0.89
MRPL54-201ENST00000330133 MARCH5Q9NX47 278 aa20.64■□□□□ 0.89
MRPL54-201ENST00000330133 KIAA1671Q9BY89 1806 aa20.64■□□□□ 0.89
MRPL54-201ENST00000330133 LACTBL1A8MY62 500 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 NCK2O43639 380 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 FAM189A1O60320 539 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 LDHAP00338 332 aaKnown RBP20.63■□□□□ 0.89
MRPL54-201ENST00000330133 ADSSP30520 456 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 CA8P35219 290 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 ACOT2P49753 483 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 DPYDQ12882 1025 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 SNW1Q13573 536 aaKnown RBP20.63■□□□□ 0.89
MRPL54-201ENST00000330133 ENOX2Q16206 610 aaKnown RBP20.63■□□□□ 0.89
MRPL54-201ENST00000330133 ZBTB41Q5SVQ8 909 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 ARMCX5Q6P1M9 558 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 CD302Q8IX05 232 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 NELFCDQ8IXH7 590 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 TMEM87AQ8NBN3 555 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 RABGGTAQ92696 567 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 FAM212AQ96EL1 285 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 DDX27Q96GQ7 796 aaKnown RBP20.63■□□□□ 0.89
MRPL54-201ENST00000330133 ZMAT2Q96NC0 199 aaKnown RBP20.63■□□□□ 0.89
MRPL54-201ENST00000330133 IGFLR1Q9H665 355 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 TLE6Q9H808 572 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 HOOK1Q9UJC3 728 aaKnown RBP20.63■□□□□ 0.89
MRPL54-201ENST00000330133 CPSF3Q9UKF6 684 aaKnown RBP20.63■□□□□ 0.89
MRPL54-201ENST00000330133 PCDHGC5Q9Y5F6 944 aa20.63■□□□□ 0.89
MRPL54-201ENST00000330133 TTC26A0AVF1 554 aa20.62■□□□□ 0.89
MRPL54-201ENST00000330133 GADD45BO75293 160 aaPredicted RBP20.62■□□□□ 0.89
MRPL54-201ENST00000330133 POU5F1Q01860 360 aaKnown RBP20.62■□□□□ 0.89
MRPL54-201ENST00000330133 SCFD1Q8WVM8 642 aa20.62■□□□□ 0.89
MRPL54-201ENST00000330133 TIGD1Q96MW7 591 aa20.62■□□□□ 0.89
MRPL54-201ENST00000330133 TSPAN18Q96SJ8 248 aa20.62■□□□□ 0.89
MRPL54-201ENST00000330133 PAAF1Q9BRP4 392 aa20.62■□□□□ 0.89
MRPL54-201ENST00000330133 ZBP1Q9H171 429 aa20.62■□□□□ 0.89
MRPL54-201ENST00000330133 CACNG4Q9UBN1 327 aa20.62■□□□□ 0.89
MRPL54-201ENST00000330133 ADAM28Q9UKQ2 775 aa20.62■□□□□ 0.89
MRPL54-201ENST00000330133 COG5Q9UP83 839 aa20.62■□□□□ 0.89
MRPL54-201ENST00000330133 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.62■□□□□ 0.89
MRPL54-201ENST00000330133 KIAA0391O15091 583 aaKnown RBP20.61■□□□□ 0.89
MRPL54-201ENST00000330133 MEFVO15553 781 aaPredicted RBP20.61■□□□□ 0.89
MRPL54-201ENST00000330133 XPOTO43592 962 aaKnown RBP20.61■□□□□ 0.89
MRPL54-201ENST00000330133 CTSAP10619 480 aa20.61■□□□□ 0.89
MRPL54-201ENST00000330133 HOXD13P35453 343 aa20.61■□□□□ 0.89
MRPL54-201ENST00000330133 SNRPFP62306 86 aaKnown RBP20.61■□□□□ 0.89
MRPL54-201ENST00000330133 HYAL1Q12794 435 aa20.61■□□□□ 0.89
MRPL54-201ENST00000330133 STK4Q13043 487 aa20.61■□□□□ 0.89
MRPL54-201ENST00000330133 DCLRE1AQ6PJP8 1040 aa20.61■□□□□ 0.89
MRPL54-201ENST00000330133 ADGRD2Q7Z7M1 963 aa20.61■□□□□ 0.89
MRPL54-201ENST00000330133 RBM23Q86U06 439 aaKnown RBP20.61■□□□□ 0.89
MRPL54-201ENST00000330133 MRPL43Q8N983 215 aaKnown RBP20.61■□□□□ 0.89
MRPL54-201ENST00000330133 HLA-CQ95604 372 aa20.61■□□□□ 0.89
MRPL54-201ENST00000330133 KIF12Q96FN5 646 aa20.61■□□□□ 0.89
MRPL54-201ENST00000330133 FAM213AQ9BRX8 229 aa20.61■□□□□ 0.89
MRPL54-201ENST00000330133 HERC2P3Q9BVR0 1158 aa20.61■□□□□ 0.89
MRPL54-201ENST00000330133 VN1R3Q9BXE9 311 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms