RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 USP11P51784 963 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 FAM102AQ5T9C2 384 aaPredicted RBP17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 CYFIP1Q7L576 1253 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 RAPGEF5Q92565 580 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 E7ENQ6 273 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 BNIP3LO60238 219 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 P3H1Q32P28 736 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 DAB2IPQ5VWQ8 1189 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 ARHGAP27Q6ZUM4 889 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 ZKSCAN4Q969J2 545 aaPredicted RBP17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 ANKZF1Q9H8Y5 726 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 NDUFA13Q9P0J0 144 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 LAMC1P11047 1609 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 SYCE1LA8MT33 242 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 RPS6KA5O75582 802 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 KLRC1P26715 233 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 SCG3Q8WXD2 468 aaKnown RBP17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 ATP6V1G2O95670 118 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 EYA4O95677 639 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 GPC3P51654 580 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 HIC1Q14526 733 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 SNRNP27Q8WVK2 155 aaKnown RBP17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 STK33Q9BYT3 514 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 SENP1Q9P0U3 644 aa17.39■□□□□ 0.37
SH3RF1-201ENST00000284637 GIMAP8Q8ND71 665 aaPredicted RBP17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 DHX35Q9H5Z1 703 aaKnown RBP17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 MARCOQ9UEW3 520 aaPredicted RBP17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 AP1B1Q10567 949 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 EFTUD2Q15029 972 aaKnown RBP eCLIP17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 RARS2Q5T160 578 aaKnown RBP17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 JAMLQ86YT9 394 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 ZBTB18Q99592 522 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 FAM118BQ9BPY3 351 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 AP5M1Q9H0R1 490 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 PARVAQ9NVD7 372 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 DDX56Q9NY93 547 aaKnown RBP17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 RBAKQ9NYW8 714 aaPredicted RBP17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 BFARQ9NZS9 450 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 PITPNM2Q9BZ72 1349 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 ITIH4Q14624 930 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 NAB2Q15742 525 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 C12orf60Q5U649 245 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 RNF135Q8IUD6 432 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 PPP1R36Q96LQ0 422 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 APEX2Q9UBZ4 518 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 NEK2P51955 445 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 CYTH1Q15438 398 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 KYNUQ16719 465 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 KIAA2013Q8IYS2 634 aa17.38■□□□□ 0.37
SH3RF1-201ENST00000284637 TMEM120BA0PK00 339 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 KCNJ1P48048 391 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 MDM1Q8TC05 714 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 PARD3BQ8TEW8 1205 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 CPA5Q8WXQ8 436 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 OLA1Q9NTK5 396 aaKnown RBP17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 SCHIP1Q9P0W5 487 aaPredicted RBP17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 LZTS1Q9Y250 596 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 SETD1BQ9UPS6 1966 aaKnown RBP17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 TMCC1O94876 653 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 NFX1Q12986 1120 aaKnown RBP17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 MTM1Q13496 603 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 SUPT20HL1Q3ZLR7 823 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 USP38Q8NB14 1042 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 MTRQ99707 1265 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 POLR3FQ9H1D9 316 aaPredicted RBP17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 ENOSF1Q7L5Y1 443 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 GPD1LQ8N335 351 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 LRRN4CLQ8ND94 238 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 CATSPER1Q8NEC5 780 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 C15orf41Q9Y2V0 281 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 SNX5Q9Y5X3 404 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 PPP1R3GB7ZBB8 358 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 MAP2K7O14733 419 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 UBTFL6P0CB48 400 aaPredicted RBP17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 CYP19A1P11511 503 aaPredicted RBP17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 ARHGDIAP52565 204 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 EIF3EP60228 445 aaKnown RBP17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 TRIM72Q6ZMU5 477 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 TSSK1BQ9BXA7 367 aa17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 SMG5Q9UPR3 1016 aaKnown RBP17.37■□□□□ 0.37
SH3RF1-201ENST00000284637 PLEKP08567 350 aaPredicted RBP17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 FMO5P49326 533 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 PSMC5P62195 406 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 TEDDM1Q5T9Z0 273 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 RC3H1Q5TC82 1133 aaKnown RBP17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 TRAPPC11Q7Z392 1133 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 REEP2Q9BRK0 252 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 ITIH2P19823 946 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 STXBP2Q15833 593 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 LZICQ8WZA0 190 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 ANKS1AQ92625 1134 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 ATXN8OSP0DMR3 200 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 GHRP10912 638 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 COPB2P35606 906 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 TMED8Q6PL24 325 aaPredicted RBP17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 RNF217Q8TC41 542 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 KLF6Q99612 283 aaPredicted RBP17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 AGO2Q9UKV8 859 aaKnown RBP17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 CFAP74Q9C0B2 1584 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 FAM47DPA6NHR8 397 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms