RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 AS3MTQ9HBK9 375 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 IP6K2Q9UHH9 426 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 TACC3Q9Y6A5 838 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 RIMS1Q86UR5 1692 aaKnown RBP17.61■□□□□ 0.41
SCAP-201ENST00000265565 ZWINTO95229 277 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 NOP14P78316 857 aaKnown RBP17.61■□□□□ 0.41
SCAP-201ENST00000265565 TTC13Q8NBP0 860 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 MARCOQ9UEW3 520 aaPredicted RBP17.61■□□□□ 0.41
SCAP-201ENST00000265565 TULP2O00295 520 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 PSMC1P62191 440 aaKnown RBP17.61■□□□□ 0.41
SCAP-201ENST00000265565 SLC27A3Q5K4L6 730 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 CEP120Q8N960 986 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 NKX2-3Q8TAU0 364 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 CDHR1Q96JP9 859 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 BATF3Q9NR55 127 aa17.61■□□□□ 0.41
SCAP-201ENST00000265565 JCADQ9P266 1359 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 DDX3XO00571 662 aaKnown RBP eCLIP17.6■□□□□ 0.412e-9■■■■■ 32
SCAP-201ENST00000265565 KRT38O76015 456 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 CALB1P05937 261 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 RARGP13631 454 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 TARSP26639 723 aaKnown RBP17.6■□□□□ 0.41
SCAP-201ENST00000265565 PGM1P36871 562 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 LRRC36Q1X8D7 754 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 ZNF667Q5HYK9 610 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 FAM160B1Q5W0V3 765 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 PLA2G4FQ68DD2 849 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 PRR5LQ6MZQ0 368 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 NUDCD3Q8IVD9 361 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 CDC42EP4Q9H3Q1 356 aaKnown RBP17.6■□□□□ 0.41
SCAP-201ENST00000265565 ATP6V0A4Q9HBG4 840 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 RBAKQ9NYW8 714 aaPredicted RBP17.6■□□□□ 0.41
SCAP-201ENST00000265565 KNDC1Q76NI1 1749 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 RPS6KA5O75582 802 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 NQO1P15559 274 aaKnown RBP17.6■□□□□ 0.41
SCAP-201ENST00000265565 ANKRD20A8PQ5CZ79 823 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 GPD1LQ8N335 351 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 MSL3Q8N5Y2 521 aaKnown RBP17.6■□□□□ 0.41
SCAP-201ENST00000265565 FAF1Q9UNN5 650 aaPredicted RBP17.6■□□□□ 0.41
SCAP-201ENST00000265565 UBE4BO95155 1302 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 SKAP2O75563 359 aaPredicted RBP17.6■□□□□ 0.41
SCAP-201ENST00000265565 KRT76Q01546 638 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 KCNMA1Q12791 1236 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 MCUQ8NE86 351 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 ATP8B4Q8TF62 1192 aa17.6■□□□□ 0.41
SCAP-201ENST00000265565 AGO2Q9UKV8 859 aaKnown RBP17.6■□□□□ 0.41
SCAP-201ENST00000265565 PABPN1LA6NDY0 278 aaKnown RBP17.59■□□□□ 0.41
SCAP-201ENST00000265565 RASSF10A6NK89 507 aa17.59■□□□□ 0.41
SCAP-201ENST00000265565 LDHAP00338 332 aaKnown RBP17.59■□□□□ 0.41
SCAP-201ENST00000265565 COG2Q14746 738 aa17.59■□□□□ 0.41
SCAP-201ENST00000265565 AGGF1Q8N302 714 aaeCLIP17.59■□□□□ 0.41
SCAP-201ENST00000265565 NLRP7Q8WX94 980 aa17.59■□□□□ 0.41
SCAP-201ENST00000265565 RIOX1Q9H6W3 641 aa17.59■□□□□ 0.41
SCAP-201ENST00000265565 KIAA1586Q9HCI6 787 aa17.59■□□□□ 0.41
SCAP-201ENST00000265565 NYAP2Q9P242 653 aa17.59■□□□□ 0.41
SCAP-201ENST00000265565 APOBEC2Q9Y235 224 aaKnown RBP17.59■□□□□ 0.41
SCAP-201ENST00000265565 OVGP1Q12889 678 aa17.59■□□□□ 0.41
SCAP-201ENST00000265565 KIF22Q14807 665 aa17.59■□□□□ 0.41
SCAP-201ENST00000265565 MED10Q9BTT4 135 aa17.59■□□□□ 0.41
SCAP-201ENST00000265565 KIFC3Q9BVG8 833 aa17.59■□□□□ 0.41
SCAP-201ENST00000265565 STK32BQ9NY57 414 aa17.59■□□□□ 0.41
SCAP-201ENST00000265565 SENP1Q9P0U3 644 aa17.59■□□□□ 0.41
SCAP-201ENST00000265565 TMCO4Q5TGY1 634 aa17.59■□□□□ 0.41
SCAP-201ENST00000265565 CBWD1Q9BRT8 395 aa17.59■□□□□ 0.41
SCAP-201ENST00000265565 GSTA1P08263 222 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 GSTA2P09210 222 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 TAL1P17542 331 aaPredicted RBP17.58■□□□□ 0.41
SCAP-201ENST00000265565 SLC1A1P43005 524 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 FUT2Q10981 343 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 NFIAQ12857 509 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 IFRD2Q12894 506 aaPredicted RBP17.58■□□□□ 0.41
SCAP-201ENST00000265565 TFDP2Q14188 446 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 HSP90AA5PQ58FG0 334 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 DCAF15Q66K64 600 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 RGS9BPQ6ZS82 235 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 ENOSF1Q7L5Y1 443 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 ST13P4Q8IZP2 240 aaPredicted RBP17.58■□□□□ 0.41
SCAP-201ENST00000265565 C3orf20Q8ND61 904 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 CYP2W1Q8TAV3 490 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 KLC2Q9H0B6 622 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 PFDN4Q9NQP4 134 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 PARVAQ9NVD7 372 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 ZNF263O14978 683 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 EIF3DO15371 548 aaKnown RBP eCLIP17.58■□□□□ 0.41
SCAP-201ENST00000265565 ECE2O60344 883 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 ENO1P06733 434 aaKnown RBP17.58■□□□□ 0.41
SCAP-201ENST00000265565 ARL4AP40617 200 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 ZNF699Q32M78 642 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 LRP10Q7Z4F1 713 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 VPS11Q9H270 941 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 SLC38A10Q9HBR0 1119 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 HAO1Q9UJM8 370 aa17.58■□□□□ 0.41
SCAP-201ENST00000265565 SMG5Q9UPR3 1016 aaKnown RBP17.58■□□□□ 0.41
SCAP-201ENST00000265565 CPA2P48052 419 aa17.58■□□□□ 0.4
SCAP-201ENST00000265565 PTENP60484 403 aa17.58■□□□□ 0.4
SCAP-201ENST00000265565 LVRNQ6Q4G3 990 aa17.58■□□□□ 0.4
SCAP-201ENST00000265565 SUGP1Q8IWZ8 645 aaKnown RBP17.58■□□□□ 0.4
SCAP-201ENST00000265565 FUKQ8N0W3 1084 aa17.58■□□□□ 0.4
SCAP-201ENST00000265565 BAP1Q92560 729 aa17.58■□□□□ 0.4
SCAP-201ENST00000265565 ACSF2Q96CM8 615 aaPredicted RBP17.58■□□□□ 0.4
SCAP-201ENST00000265565 STAMBPL1Q96FJ0 436 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms