RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 PIGRP01833 764 aa24.47■■□□□ 1.51
CDX1-201ENST00000231656 TFRCP02786 760 aaKnown RBP24.47■■□□□ 1.51
CDX1-201ENST00000231656 FERP16591 822 aa24.47■■□□□ 1.51
CDX1-201ENST00000231656 STAT1P42224 750 aa24.47■■□□□ 1.51
CDX1-201ENST00000231656 PHKA2P46019 1235 aa24.47■■□□□ 1.51
CDX1-201ENST00000231656 GPC3P51654 580 aa24.47■■□□□ 1.51
CDX1-201ENST00000231656 NLRP11P59045 1033 aaKnown RBP24.47■■□□□ 1.51
CDX1-201ENST00000231656 SNRNP35Q16560 246 aaKnown RBP24.47■■□□□ 1.51
CDX1-201ENST00000231656 MAPK6Q16659 721 aa24.47■■□□□ 1.51
CDX1-201ENST00000231656 EPC2Q52LR7 807 aa24.47■■□□□ 1.51
CDX1-201ENST00000231656 FBXO38Q6PIJ6 1188 aa24.47■■□□□ 1.51
CDX1-201ENST00000231656 GOLGA1Q92805 767 aa24.47■■□□□ 1.51
CDX1-201ENST00000231656 TSEN34Q9BSV6 310 aaKnown RBP24.47■■□□□ 1.51
CDX1-201ENST00000231656 MINDY3Q9H8M7 445 aa24.47■■□□□ 1.51
CDX1-201ENST00000231656 PAK6Q9NQU5 681 aaPredicted RBP24.47■■□□□ 1.51
CDX1-201ENST00000231656 NENFQ9UMX5 172 aa24.47■■□□□ 1.51
CDX1-201ENST00000231656 GRIN2DO15399 1336 aa24.46■■□□□ 1.51
CDX1-201ENST00000231656 MOXD2PA6NHM9 499 aa24.46■■□□□ 1.51
CDX1-201ENST00000231656 CABYRO75952 493 aa24.46■■□□□ 1.51
CDX1-201ENST00000231656 H2AFXP16104 143 aaPredicted RBP24.46■■□□□ 1.51
CDX1-201ENST00000231656 SOX5P35711 763 aa24.46■■□□□ 1.51
CDX1-201ENST00000231656 LIG4P49917 911 aa24.46■■□□□ 1.51
CDX1-201ENST00000231656 MTFR1Q15390 333 aa24.46■■□□□ 1.51
CDX1-201ENST00000231656 FAM47CQ5HY64 1035 aa24.46■■□□□ 1.51
CDX1-201ENST00000231656 IFNLR1Q8IU57 520 aaPredicted RBP24.46■■□□□ 1.51
CDX1-201ENST00000231656 DNAJB3Q8WWF6 145 aa24.46■■□□□ 1.51
CDX1-201ENST00000231656 SAAL1Q96ER3 474 aa24.46■■□□□ 1.51
CDX1-201ENST00000231656 PDCL3Q9H2J4 239 aa24.46■■□□□ 1.51
CDX1-201ENST00000231656 PUF60Q9UHX1 559 aaKnown RBP24.46■■□□□ 1.51
CDX1-201ENST00000231656 INO80B-WBP1J3KQ70 363 aa24.45■■□□□ 1.5
CDX1-201ENST00000231656 MYCP01106 439 aaPredicted RBP24.45■■□□□ 1.5
CDX1-201ENST00000231656 PRKCBP05771 671 aa24.45■■□□□ 1.5
CDX1-201ENST00000231656 PNMA6AP0CW24 399 aaPredicted RBP24.45■■□□□ 1.5
CDX1-201ENST00000231656 RFX1P22670 979 aa24.45■■□□□ 1.5
CDX1-201ENST00000231656 GCLMP48507 274 aa24.45■■□□□ 1.5
CDX1-201ENST00000231656 MBTD1Q05BQ5 628 aa24.45■■□□□ 1.5
CDX1-201ENST00000231656 DRAP1Q14919 205 aaPredicted RBP24.45■■□□□ 1.5
CDX1-201ENST00000231656 GDF6Q6KF10 455 aaPredicted RBP24.45■■□□□ 1.5
CDX1-201ENST00000231656 PHLDB3Q6NSJ2 640 aa24.45■■□□□ 1.5
CDX1-201ENST00000231656 SESTD1Q86VW0 696 aa24.45■■□□□ 1.5
CDX1-201ENST00000231656 RNF10Q8N5U6 811 aaKnown RBP24.45■■□□□ 1.5
CDX1-201ENST00000231656 ARRDC4Q8NCT1 418 aa24.45■■□□□ 1.5
CDX1-201ENST00000231656 NLRP7Q8WX94 980 aa24.45■■□□□ 1.5
CDX1-201ENST00000231656 TARS2Q9BW92 718 aaKnown RBP24.45■■□□□ 1.5
CDX1-201ENST00000231656 INO80BQ9C086 356 aaPredicted RBP24.45■■□□□ 1.5
CDX1-201ENST00000231656 FZD8Q9H461 694 aa24.45■■□□□ 1.5
CDX1-201ENST00000231656 SAR1BQ9Y6B6 198 aa24.45■■□□□ 1.5
CDX1-201ENST00000231656 GARTP22102 1010 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 CDC42EP1Q00587 391 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 TEX35Q5T0J7 233 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 C10orf76Q5T2E6 689 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 CTU1Q7Z7A3 348 aaKnown RBP24.44■■□□□ 1.5
CDX1-201ENST00000231656 ZNF410Q86VK4 478 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 RABGGTAQ92696 567 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 VTI1AQ96AJ9 217 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 MFSD14AQ96MC6 490 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 TTLL13PA6NNM8 815 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 GFPT2O94808 682 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 IQCF3P0C7M6 154 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 TMEM62Q0P6H9 643 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 NAB2Q15742 525 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 KIZQ2M2Z5 673 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 OLIG1Q8TAK6 271 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 POMGNT1Q8WZA1 660 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 SCLT1Q96NL6 688 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 MRPL4Q9BYD3 311 aaKnown RBP24.44■■□□□ 1.5
CDX1-201ENST00000231656 TMEM117Q9H0C3 514 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 ADAMTS10Q9H324 1103 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 JRKLQ9Y4A0 524 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 STYXL1Q9Y6J8 313 aa24.44■■□□□ 1.5
CDX1-201ENST00000231656 EVI5O60447 810 aa24.43■■□□□ 1.5
CDX1-201ENST00000231656 GPR32O75388 356 aa24.43■■□□□ 1.5
CDX1-201ENST00000231656 CCL5P13501 91 aa24.43■■□□□ 1.5
CDX1-201ENST00000231656 LBX1P52954 281 aa24.43■■□□□ 1.5
CDX1-201ENST00000231656 CETN1Q12798 172 aa24.43■■□□□ 1.5
CDX1-201ENST00000231656 ZPBP2Q6X784 338 aa24.43■■□□□ 1.5
CDX1-201ENST00000231656 PARD3BQ8TEW8 1205 aa24.43■■□□□ 1.5
CDX1-201ENST00000231656 GLT1D1Q96MS3 346 aa24.43■■□□□ 1.5
CDX1-201ENST00000231656 PACSIN1Q9BY11 444 aa24.43■■□□□ 1.5
CDX1-201ENST00000231656 ATP8B3O60423 1300 aa24.43■■□□□ 1.5
CDX1-201ENST00000231656 ACKR2O00590 384 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 CSDE1O75534 798 aaKnown RBP24.42■■□□□ 1.5
CDX1-201ENST00000231656 MXI1P50539 228 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 ITGA7Q13683 1181 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 HSP90AA2PQ14568 343 aaPredicted RBP24.42■■□□□ 1.5
CDX1-201ENST00000231656 TAF2Q6P1X5 1199 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 GPR161Q8N6U8 529 aaKnown RBP24.42■■□□□ 1.5
CDX1-201ENST00000231656 TMC2Q8TDI7 906 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 ZBTB45Q96K62 511 aaPredicted RBP24.42■■□□□ 1.5
CDX1-201ENST00000231656 NOX5Q96PH1 765 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 DEFB118Q96PH6 123 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 ALS2CR12Q96Q35 445 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 RNF208Q9H0X6 261 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 NAGPAQ9UK23 515 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 ENPEPQ07075 957 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 CYP24A1Q07973 514 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 FAM187BQ17R55 369 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 SLFN12LQ6IEE8 588 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 FMNL3Q8IVF7 1028 aa24.42■■□□□ 1.5
CDX1-201ENST00000231656 GPD1LQ8N335 351 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms