RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W IFM1P25038 676 aa3.25□□□□□ -1.89
VPS27YNR006W SPS18P32572 300 aa3.25□□□□□ -1.89
VPS27YNR006W SGE1P33335 543 aa3.25□□□□□ -1.89
VPS27YNR006W ASK1P35734 292 aa3.25□□□□□ -1.89
VPS27YNR006W SRY1P36007 326 aa3.25□□□□□ -1.89
VPS27YNR006W FZO1P38297 855 aa3.25□□□□□ -1.89
VPS27YNR006W WSC4P38739 605 aa3.25□□□□□ -1.89
VPS27YNR006W COG3P40094 801 aa3.25□□□□□ -1.89
VPS27YNR006W HAC1P41546 238 aa3.25□□□□□ -1.89
VPS27YNR006W IRC18P47056 224 aa3.25□□□□□ -1.89
VPS27YNR006W SYF2P53277 215 aaPredicted RBP3.25□□□□□ -1.89
VPS27YNR006W MSO1P53604 210 aaKnown RBP3.25□□□□□ -1.89
VPS27YNR006W GAS2Q06135 555 aa3.25□□□□□ -1.89
VPS27YNR006W RPN8Q08723 338 aaKnown RBP3.25□□□□□ -1.89
VPS27YNR006W SFM1Q12314 213 aa3.25□□□□□ -1.89
VPS27YNR006W DPB2P24482 689 aaPredicted RBP3.24□□□□□ -1.89
VPS27YNR006W YCR025CP25352 136 aa3.24□□□□□ -1.89
VPS27YNR006W ARC40P38328 384 aaKnown RBP3.24□□□□□ -1.89
VPS27YNR006W GRE3P38715 327 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
VPS27YNR006W LSM12P38828 187 aaKnown RBP3.24□□□□□ -1.89
VPS27YNR006W YHR127WP38833 243 aaKnown RBP3.24□□□□□ -1.89
VPS27YNR006W SRP14P38985 146 aa3.24□□□□□ -1.89
VPS27YNR006W EGT2P42835 1041 aa3.24□□□□□ -1.89
VPS27YNR006W CPR7P47103 393 aa3.24□□□□□ -1.89
VPS27YNR006W MCM22P47167 239 aa3.24□□□□□ -1.89
VPS27YNR006W BNS1P50084 137 aa3.24□□□□□ -1.89
VPS27YNR006W NRM1P53718 249 aa3.24□□□□□ -1.89
VPS27YNR006W YLR460CP54007 376 aa3.24□□□□□ -1.89
VPS27YNR006W YMR010WQ03687 405 aa3.24□□□□□ -1.89
VPS27YNR006W SEI1Q06058 285 aa3.24□□□□□ -1.89
VPS27YNR006W HEM25Q07534 307 aa3.24□□□□□ -1.89
VPS27YNR006W YNG1Q08465 219 aa3.24□□□□□ -1.89
VPS27YNR006W RPS8AP0CX39 200 aaKnown RBP3.24□□□□□ -1.89
VPS27YNR006W RPS8BP0CX40 200 aaKnown RBP3.24□□□□□ -1.89
VPS27YNR006W MCK1P21965 375 aaKnown RBP3.24□□□□□ -1.89
VPS27YNR006W MRP21P38175 177 aa3.24□□□□□ -1.89
VPS27YNR006W HEK2P38199 381 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89 RIP-Chip
VPS27YNR006W YHL049CP38722 271 aa3.24□□□□□ -1.89
VPS27YNR006W YJL213WP40896 331 aa3.24□□□□□ -1.89
VPS27YNR006W BRR6P53062 197 aa3.24□□□□□ -1.89
VPS27YNR006W MMS2P53152 137 aa3.24□□□□□ -1.89
VPS27YNR006W SCW4P53334 386 aaKnown RBP3.24□□□□□ -1.89
VPS27YNR006W YML122CQ03207 126 aa3.24□□□□□ -1.89
VPS27YNR006W FMP42Q04991 504 aa3.24□□□□□ -1.89
VPS27YNR006W FSH2Q05015 223 aa3.24□□□□□ -1.89
VPS27YNR006W RIF2Q06208 395 aa3.24□□□□□ -1.89
VPS27YNR006W YOR292CQ08743 309 aa3.24□□□□□ -1.89
VPS27YNR006W YPL150WQ12152 901 aa3.24□□□□□ -1.89
VPS27YNR006W YPL245WQ12179 454 aaKnown RBP3.24□□□□□ -1.89
VPS27YNR006W USB1Q12208 290 aaKnown RBP3.24□□□□□ -1.89
VPS27YNR006W WTM1Q12363 437 aaKnown RBP3.24□□□□□ -1.89
VPS27YNR006W STU1P38198 1513 aa3.23□□□□□ -1.89
VPS27YNR006W MDS3P53094 1487 aa3.23□□□□□ -1.89
VPS27YNR006W BPT1P14772 1559 aa3.23□□□□□ -1.89
VPS27YNR006W PEP1P32319 1579 aa3.23□□□□□ -1.89
VPS27YNR006W MET2P08465 486 aa3.23□□□□□ -1.89
VPS27YNR006W PUT1P09368 476 aa3.23□□□□□ -1.89
VPS27YNR006W YKR104WP0CE69 306 aa3.23□□□□□ -1.89
VPS27YNR006W RPL4AP10664 362 aaKnown RBP3.23□□□□□ -1.89
VPS27YNR006W CPR4P25334 318 aa3.23□□□□□ -1.89
VPS27YNR006W URA10P30402 227 aa3.23□□□□□ -1.89
VPS27YNR006W YPT53P36019 220 aa3.23□□□□□ -1.89
VPS27YNR006W MRPL3P36516 390 aa3.23□□□□□ -1.89
VPS27YNR006W GAB1P41733 394 aa3.23□□□□□ -1.89
VPS27YNR006W RPL4BP49626 362 aaKnown RBP3.23□□□□□ -1.89
VPS27YNR006W FYV6P53913 173 aa3.23□□□□□ -1.89
VPS27YNR006W YET2Q04210 160 aa3.23□□□□□ -1.89
VPS27YNR006W SPG4Q04438 115 aa3.23□□□□□ -1.89
VPS27YNR006W YOL163WP0CF20 169 aa3.22□□□□□ -1.89
VPS27YNR006W ASP3-2P0CX77 362 aa3.22□□□□□ -1.89
VPS27YNR006W ASP3-3P0CX78 362 aa3.22□□□□□ -1.89
VPS27YNR006W ASP3-4P0CX79 362 aa3.22□□□□□ -1.89
VPS27YNR006W ASP3-1P0CZ17 362 aa3.22□□□□□ -1.89
VPS27YNR006W GCY1P14065 312 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
VPS27YNR006W CPT1P17898 393 aa3.22□□□□□ -1.89
VPS27YNR006W DBF2P22204 572 aa3.22□□□□□ -1.89
VPS27YNR006W YCR043CP25361 127 aa3.22□□□□□ -1.89
VPS27YNR006W VPH2P32341 215 aa3.22□□□□□ -1.89
VPS27YNR006W DBP7P36120 742 aaKnown RBP3.22□□□□□ -1.89
VPS27YNR006W MDM31P38880 579 aa3.22□□□□□ -1.89
VPS27YNR006W YIL067CP40514 678 aa3.22□□□□□ -1.89
VPS27YNR006W MRPL49P40858 161 aaPredicted RBP3.22□□□□□ -1.89
VPS27YNR006W YJR054WP47114 497 aa3.22□□□□□ -1.89
VPS27YNR006W SDS23P53172 527 aa3.22□□□□□ -1.89
VPS27YNR006W CLD1P53264 445 aa3.22□□□□□ -1.89
VPS27YNR006W ADD37Q03233 198 aa3.22□□□□□ -1.89
VPS27YNR006W YET3Q07451 203 aa3.22□□□□□ -1.89
VPS27YNR006W HNT3Q08702 217 aa3.22□□□□□ -1.89
VPS27YNR006W YOR376WQ08900 122 aa3.22□□□□□ -1.89
VPS27YNR006W QCR2P07257 368 aa3.22□□□□□ -1.89
VPS27YNR006W RPB5P20434 215 aa3.22□□□□□ -1.89
VPS27YNR006W LDS1P31379 325 aa3.22□□□□□ -1.89
VPS27YNR006W CSE2P33308 149 aa3.22□□□□□ -1.89
VPS27YNR006W FRM2P37261 193 aa3.22□□□□□ -1.89
VPS27YNR006W FIG1P38224 298 aa3.22□□□□□ -1.89
VPS27YNR006W SHG1P38337 142 aa3.22□□□□□ -1.89
VPS27YNR006W AVT7P40501 490 aa3.22□□□□□ -1.89
VPS27YNR006W ATG18P43601 500 aa3.22□□□□□ -1.89
VPS27YNR006W PDR17P53844 350 aa3.22□□□□□ -1.89
VPS27YNR006W CWC25P53854 179 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 528.1 ms