RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C YMR166CQ03829 368 aa2.14□□□□□ -2.07
CSF1YLR087C RSC58Q07979 502 aa2.14□□□□□ -2.07
CSF1YLR087C SPC3Q12133 184 aa2.14□□□□□ -2.07
CSF1YLR087C PRE1P22141 198 aaKnown RBP2.13□□□□□ -2.07
CSF1YLR087C ARC40P38328 384 aaKnown RBP2.13□□□□□ -2.07
CSF1YLR087C ARP1P38696 384 aa2.13□□□□□ -2.07
CSF1YLR087C NSA2P40078 261 aaKnown RBP2.13□□□□□ -2.07
CSF1YLR087C YGR153WP48238 217 aa2.13□□□□□ -2.07
CSF1YLR087C MRK1P50873 501 aa2.13□□□□□ -2.07
CSF1YLR087C YGL138CP53122 345 aa2.13□□□□□ -2.07
CSF1YLR087C OST6Q03723 332 aa2.13□□□□□ -2.07
CSF1YLR087C COQ9Q05779 260 aa2.13□□□□□ -2.07
CSF1YLR087C YOL029CQ08187 201 aa2.13□□□□□ -2.07
CSF1YLR087C GSC2P40989 1895 aa2.13□□□□□ -2.07
CSF1YLR087C HAP3P13434 144 aa2.13□□□□□ -2.07
CSF1YLR087C YCK1P23291 538 aa2.13□□□□□ -2.07
CSF1YLR087C MKK1P32490 508 aa2.13□□□□□ -2.07
CSF1YLR087C TFA2P36145 328 aa2.13□□□□□ -2.07
CSF1YLR087C MTC4P38335 694 aaKnown RBP2.13□□□□□ -2.07
CSF1YLR087C PAC1P39946 494 aaKnown RBP2.13□□□□□ -2.07
CSF1YLR087C GLE2P40066 365 aa2.13□□□□□ -2.07
CSF1YLR087C LCP5P40079 357 aaPredicted RBP2.13□□□□□ -2.07
CSF1YLR087C YJR011CP47086 261 aaPredicted RBP2.13□□□□□ -2.07
CSF1YLR087C YGR117CP53270 476 aa2.13□□□□□ -2.07
CSF1YLR087C COX12Q01519 83 aa2.13□□□□□ -2.07
CSF1YLR087C CAC2Q04199 468 aa2.13□□□□□ -2.07
CSF1YLR087C GRX8Q05926 109 aa2.13□□□□□ -2.07
CSF1YLR087C VMA9Q3E7B6 73 aa2.13□□□□□ -2.07
CSF1YLR087C CCH1P50077 2039 aa2.13□□□□□ -2.07
CSF1YLR087C APA2P22108 325 aa2.13□□□□□ -2.07
CSF1YLR087C YCR043CP25361 127 aa2.13□□□□□ -2.07
CSF1YLR087C RIB1P38066 345 aa2.13□□□□□ -2.07
CSF1YLR087C ARA1P38115 344 aa2.13□□□□□ -2.07
CSF1YLR087C YBP1P38315 674 aa2.13□□□□□ -2.07
CSF1YLR087C YIL165CP40446 119 aa2.13□□□□□ -2.07
CSF1YLR087C OPT1P40897 799 aa2.13□□□□□ -2.07
CSF1YLR087C RRT5P43607 289 aa2.13□□□□□ -2.07
CSF1YLR087C VHT1P53241 593 aa2.13□□□□□ -2.07
CSF1YLR087C IDP3P53982 420 aaKnown RBP2.13□□□□□ -2.07
CSF1YLR087C ARR2Q06597 130 aa2.13□□□□□ -2.07
CSF1YLR087C YOR015WQ12169 119 aa2.13□□□□□ -2.07
CSF1YLR087C YBR126W-AQ8TGU7 68 aa2.13□□□□□ -2.07
CSF1YLR087C SPO13P23624 291 aa2.13□□□□□ -2.07
CSF1YLR087C IMG1P25626 169 aa2.13□□□□□ -2.07
CSF1YLR087C LAC1P28496 418 aa2.13□□□□□ -2.07
CSF1YLR087C TPO5P36029 618 aa2.13□□□□□ -2.07
CSF1YLR087C UBA4P38820 440 aa2.13□□□□□ -2.07
CSF1YLR087C YNL320WP42840 284 aa2.13□□□□□ -2.07
CSF1YLR087C VPS28Q02767 242 aa2.13□□□□□ -2.07
CSF1YLR087C ECI1Q05871 280 aa2.13□□□□□ -2.07
CSF1YLR087C SLH1P53327 1967 aaKnown RBP2.13□□□□□ -2.07
CSF1YLR087C COX9P07255 59 aa2.13□□□□□ -2.07
CSF1YLR087C MRM1P25270 412 aa2.13□□□□□ -2.07
CSF1YLR087C NRP1P32770 719 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
CSF1YLR087C MGM101P32787 269 aaKnown RBP2.13□□□□□ -2.07
CSF1YLR087C VBA2P38358 474 aaKnown RBP2.13□□□□□ -2.07
CSF1YLR087C GAA1P39012 614 aa2.13□□□□□ -2.07
CSF1YLR087C EDC3P39998 551 aaKnown RBP2.13□□□□□ -2.07
CSF1YLR087C YFR020WP43600 232 aa2.13□□□□□ -2.07
CSF1YLR087C SCS3P53012 380 aa2.13□□□□□ -2.07
CSF1YLR087C NIS1P53939 407 aa2.13□□□□□ -2.07
CSF1YLR087C AI5_ALPHAQ9ZZX1 630 aa2.13□□□□□ -2.07
CSF1YLR087C MSW1P04803 379 aa2.13□□□□□ -2.07
CSF1YLR087C ERD2P18414 219 aa2.13□□□□□ -2.07
CSF1YLR087C SNC2P33328 115 aa2.13□□□□□ -2.07
CSF1YLR087C QRI7P43122 407 aa2.13□□□□□ -2.07
CSF1YLR087C HSV2P50079 448 aaPredicted RBP2.13□□□□□ -2.07
CSF1YLR087C PHO23P50947 330 aa2.13□□□□□ -2.07
CSF1YLR087C SED5Q01590 340 aa2.13□□□□□ -2.07
CSF1YLR087C YVH1Q02256 364 aaKnown RBP2.13□□□□□ -2.07
CSF1YLR087C GPB1Q08886 897 aa2.13□□□□□ -2.07
CSF1YLR087C BIO2P32451 375 aa2.13□□□□□ -2.07
CSF1YLR087C PHA2P32452 334 aa2.13□□□□□ -2.07
CSF1YLR087C NNK1P36003 928 aa2.13□□□□□ -2.07
CSF1YLR087C TUL1P36096 758 aa2.13□□□□□ -2.07
CSF1YLR087C ECM31P38122 312 aa2.13□□□□□ -2.07
CSF1YLR087C YBR090CP38253 122 aa2.13□□□□□ -2.07
CSF1YLR087C IML3P38265 245 aa2.13□□□□□ -2.07
CSF1YLR087C FAU1P40099 211 aa2.13□□□□□ -2.07
CSF1YLR087C CDH1P53197 566 aa2.13□□□□□ -2.07
CSF1YLR087C VPS62P53285 467 aa2.13□□□□□ -2.07
CSF1YLR087C MTM1P53320 366 aa2.13□□□□□ -2.07
CSF1YLR087C ASI2P53895 289 aa2.13□□□□□ -2.07
CSF1YLR087C COX20Q04935 205 aa2.13□□□□□ -2.07
CSF1YLR087C SMD2Q06217 110 aaKnown RBP2.13□□□□□ -2.07
CSF1YLR087C GAL80P04387 435 aa2.12□□□□□ -2.07
CSF1YLR087C GPA2P10823 449 aa2.12□□□□□ -2.07
CSF1YLR087C ARF2P19146 181 aaKnown RBP2.12□□□□□ -2.07
CSF1YLR087C SRB5P32585 307 aa2.12□□□□□ -2.07
CSF1YLR087C SUR1P33300 382 aa2.12□□□□□ -2.07
CSF1YLR087C IPT1P38954 527 aa2.12□□□□□ -2.07
CSF1YLR087C TIM21P53220 239 aa2.12□□□□□ -2.07
CSF1YLR087C CPR8P53728 308 aa2.12□□□□□ -2.07
CSF1YLR087C YOL073CQ08232 322 aa2.12□□□□□ -2.07
CSF1YLR087C YNR034W-AQ3E841 98 aa2.12□□□□□ -2.07
CSF1YLR087C HIS3P06633 220 aa2.12□□□□□ -2.07
CSF1YLR087C TOM40P23644 387 aaKnown RBP2.12□□□□□ -2.07
CSF1YLR087C FPS1P23900 669 aa2.12□□□□□ -2.07
CSF1YLR087C SLI15P38283 698 aa2.12□□□□□ -2.07
CSF1YLR087C YFL052WP43551 465 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms