RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W UGA1P17649 471 aa1.14□□□□□ -2.23
HIT1YJR055W YSR3P23501 404 aa1.14□□□□□ -2.23
HIT1YJR055W GPI12P23797 304 aa1.14□□□□□ -2.23
HIT1YJR055W RRT12P25381 491 aa1.14□□□□□ -2.23
HIT1YJR055W ARO4P32449 370 aaKnown RBP1.14□□□□□ -2.23
HIT1YJR055W MRPL3P36516 390 aa1.14□□□□□ -2.23
HIT1YJR055W YPC1P38298 316 aa1.14□□□□□ -2.23
HIT1YJR055W MBA1P38300 278 aa1.14□□□□□ -2.23
HIT1YJR055W PHO89P38361 574 aa1.14□□□□□ -2.23
HIT1YJR055W RRG9P40156 214 aa1.14□□□□□ -2.23
HIT1YJR055W MNN5P46982 586 aa1.14□□□□□ -2.23
HIT1YJR055W MRX5P47007 382 aa1.14□□□□□ -2.23
HIT1YJR055W PNC1P53184 216 aaKnown RBP1.14□□□□□ -2.23
HIT1YJR055W RRG8Q06109 277 aa1.14□□□□□ -2.23
HIT1YJR055W PEX30Q06169 523 aa1.14□□□□□ -2.23
HIT1YJR055W CUR1Q06469 252 aa1.14□□□□□ -2.23
HIT1YJR055W VAC14Q06708 880 aa1.14□□□□□ -2.23
HIT1YJR055W DIB1Q06819 143 aaPredicted RBP1.14□□□□□ -2.23
HIT1YJR055W MRPL23Q12487 163 aaPredicted RBP1.14□□□□□ -2.23
HIT1YJR055W YEL009C-AA0A023PZF2 135 aa1.13□□□□□ -2.23
HIT1YJR055W TFS1P14306 219 aa1.13□□□□□ -2.23
HIT1YJR055W KRE1P17260 313 aa1.13□□□□□ -2.23
HIT1YJR055W DAL80P26343 269 aa1.13□□□□□ -2.23
HIT1YJR055W GCG1P32656 232 aaKnown RBP1.13□□□□□ -2.23
HIT1YJR055W IMP3P32899 183 aaPredicted RBP1.13□□□□□ -2.23
HIT1YJR055W MED6P38782 295 aa1.13□□□□□ -2.23
HIT1YJR055W SEN34P39707 275 aa1.13□□□□□ -2.23
HIT1YJR055W GTO1P48239 356 aa1.13□□□□□ -2.23
HIT1YJR055W UBC13P52490 153 aa1.13□□□□□ -2.23
HIT1YJR055W MIG2P53035 382 aa1.13□□□□□ -2.23
HIT1YJR055W CPD1P53314 239 aa1.13□□□□□ -2.23
HIT1YJR055W ALG9P53868 555 aaKnown RBP1.13□□□□□ -2.23
HIT1YJR055W SWT21P53873 357 aaPredicted RBP1.13□□□□□ -2.23
HIT1YJR055W YNL050CP53952 270 aa1.13□□□□□ -2.23
HIT1YJR055W YNL040WP53960 456 aaPredicted RBP1.13□□□□□ -2.23
HIT1YJR055W DPP1Q05521 289 aa1.13□□□□□ -2.23
HIT1YJR055W DXO1Q06349 442 aa1.13□□□□□ -2.23
HIT1YJR055W BER1Q06688 274 aaKnown RBP1.13□□□□□ -2.23
HIT1YJR055W YPL264CQ08980 353 aa1.13□□□□□ -2.23
HIT1YJR055W APC9Q12107 265 aa1.13□□□□□ -2.23
HIT1YJR055W PER33Q12144 273 aa1.13□□□□□ -2.23
HIT1YJR055W CAM1P29547 415 aaKnown RBP1.12□□□□□ -2.23
HIT1YJR055W COT1P32798 439 aa1.12□□□□□ -2.23
HIT1YJR055W SPT4P32914 102 aaPredicted RBP1.12□□□□□ -2.23
HIT1YJR055W RPC37P36121 282 aa1.12□□□□□ -2.23
HIT1YJR055W MRPL40P36534 297 aa1.12□□□□□ -2.23
HIT1YJR055W AVT6P40074 448 aa1.12□□□□□ -2.23
HIT1YJR055W PCL7P40186 285 aa1.12□□□□□ -2.23
HIT1YJR055W AVT7P40501 490 aa1.12□□□□□ -2.23
HIT1YJR055W AGP3P43548 558 aa1.12□□□□□ -2.23
HIT1YJR055W YFR045WP43617 309 aa1.12□□□□□ -2.23
HIT1YJR055W EMC2P47133 292 aaKnown RBP1.12□□□□□ -2.23
HIT1YJR055W LIF1P53150 421 aa1.12□□□□□ -2.23
HIT1YJR055W EGD1Q02642 157 aaKnown RBP1.12□□□□□ -2.23
HIT1YJR055W TAF9Q05027 157 aa1.12□□□□□ -2.23
HIT1YJR055W TAZ1Q06510 381 aa1.12□□□□□ -2.23
HIT1YJR055W YLL007CQ07799 665 aa1.12□□□□□ -2.23
HIT1YJR055W PLB3Q08108 686 aa1.12□□□□□ -2.23
HIT1YJR055W TY3A-GQ12173 290 aa1.12□□□□□ -2.23
HIT1YJR055W YDR524C-BQ3E6R4 66 aa1.12□□□□□ -2.23
HIT1YJR055W TY3A-IQ99219 290 aa1.12□□□□□ -2.23
HIT1YJR055W SEC16P48415 2195 aaKnown RBP1.12□□□□□ -2.23
HIT1YJR055W MOT1P32333 1867 aa1.12□□□□□ -2.23
HIT1YJR055W YOL163WP0CF20 169 aa1.11□□□□□ -2.23
HIT1YJR055W PHO80P20052 293 aa1.11□□□□□ -2.23
HIT1YJR055W KRE6P32486 720 aa1.11□□□□□ -2.23
HIT1YJR055W CAT2P32796 670 aaKnown RBP1.11□□□□□ -2.23
HIT1YJR055W GPX1P36014 167 aa1.11□□□□□ -2.23
HIT1YJR055W MED8P38304 223 aa1.11□□□□□ -2.23
HIT1YJR055W VAB2P40003 282 aa1.11□□□□□ -2.23
HIT1YJR055W YER188WP40103 239 aa1.11□□□□□ -2.23
HIT1YJR055W SYS1P41544 203 aa1.11□□□□□ -2.23
HIT1YJR055W YPT32P51996 222 aaKnown RBP1.11□□□□□ -2.23
HIT1YJR055W PEX31P53203 462 aa1.11□□□□□ -2.23
HIT1YJR055W YNL260CP53846 198 aa1.11□□□□□ -2.23
HIT1YJR055W PRO2P54885 456 aaKnown RBP1.11□□□□□ -2.23
HIT1YJR055W BCP1Q06338 283 aa1.11□□□□□ -2.23
HIT1YJR055W SGT2Q12118 346 aaKnown RBP1.11□□□□□ -2.23
HIT1YJR055W TIM22Q12328 207 aa1.11□□□□□ -2.23
HIT1YJR055W FKS1P38631 1876 aaKnown RBP1.11□□□□□ -2.23
HIT1YJR055W RPC40P07703 335 aaKnown RBP1.1□□□□□ -2.23
HIT1YJR055W MRP1P10662 321 aaKnown RBP1.1□□□□□ -2.23
HIT1YJR055W PRE7P23724 241 aaKnown RBP1.1□□□□□ -2.23
HIT1YJR055W VPH2P32341 215 aa1.1□□□□□ -2.23
HIT1YJR055W AEP1P32493 518 aa1.1□□□□□ -2.23
HIT1YJR055W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.1□□□□□ -2.23not detected
HIT1YJR055W CAB3P36076 571 aa1.1□□□□□ -2.23
HIT1YJR055W YBR062CP38239 180 aa1.1□□□□□ -2.23
HIT1YJR055W PEX18P38855 283 aa1.1□□□□□ -2.23
HIT1YJR055W GDS1P41913 522 aa1.1□□□□□ -2.23
HIT1YJR055W BAT2P47176 376 aaKnown RBP1.1□□□□□ -2.23
HIT1YJR055W TIM21P53220 239 aa1.1□□□□□ -2.23
HIT1YJR055W BIO4P53630 237 aa1.1□□□□□ -2.23
HIT1YJR055W SPO19Q03029 223 aa1.1□□□□□ -2.23
HIT1YJR055W SLD7Q08457 257 aa1.1□□□□□ -2.23
HIT1YJR055W MSS116P15424 664 aaKnown RBP1.09□□□□□ -2.23
HIT1YJR055W CDC42P19073 191 aa1.09□□□□□ -2.23
HIT1YJR055W YCR025CP25352 136 aa1.09□□□□□ -2.23
HIT1YJR055W RSA4P25382 515 aaKnown RBP1.09□□□□□ -2.23
HIT1YJR055W ERG2P32352 222 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms