RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W SPT8P38915 602 aa1.9□□□□□ -2.11
LOC1YFR001W SHC1P39000 512 aa1.9□□□□□ -2.11
LOC1YFR001W CGI121Q03705 181 aaKnown RBP1.9□□□□□ -2.11
LOC1YFR001W GMC2Q06201 188 aa1.9□□□□□ -2.11
LOC1YFR001W MET16P18408 261 aaPredicted RBP1.89□□□□□ -2.11
LOC1YFR001W PPH21P23594 369 aa1.89□□□□□ -2.11
LOC1YFR001W EBP2P36049 427 aaKnown RBP1.89□□□□□ -2.11
LOC1YFR001W YGP1P38616 354 aaKnown RBP1.89□□□□□ -2.11
LOC1YFR001W TEM1P38987 245 aa1.89□□□□□ -2.11
LOC1YFR001W COG3P40094 801 aa1.89□□□□□ -2.11
LOC1YFR001W GON7P46984 123 aa1.89□□□□□ -2.11
LOC1YFR001W TAD2P47058 250 aa1.89□□□□□ -2.11
LOC1YFR001W YJL028WP47062 111 aa1.89□□□□□ -2.11
LOC1YFR001W SLX9P53251 210 aaPredicted RBP1.89□□□□□ -2.11
LOC1YFR001W CAB4P53332 305 aa1.89□□□□□ -2.11
LOC1YFR001W YMR114CQ04471 368 aaKnown RBP1.89□□□□□ -2.11
LOC1YFR001W CTR3Q06686 241 aa1.89□□□□□ -2.11
LOC1YFR001W YOR283WQ12040 230 aaKnown RBP1.89□□□□□ -2.11
LOC1YFR001W TY3A-GQ12173 290 aa1.89□□□□□ -2.11
LOC1YFR001W TY3A-IQ99219 290 aa1.89□□□□□ -2.11
LOC1YFR001W PRM9P39551 298 aa1.88□□□□□ -2.11
LOC1YFR001W COA1P40452 197 aa1.88□□□□□ -2.11
LOC1YFR001W YJL016WP47072 561 aa1.88□□□□□ -2.11
LOC1YFR001W MDM34P53083 459 aa1.88□□□□□ -2.11
LOC1YFR001W SLM2P53955 656 aa1.88□□□□□ -2.11
LOC1YFR001W SME1Q12330 94 aaPredicted RBP1.88□□□□□ -2.11
LOC1YFR001W GEP5Q12393 293 aa1.88□□□□□ -2.11
LOC1YFR001W RNP1P32385 249 aa1.87□□□□□ -2.11
LOC1YFR001W DRE2P36152 348 aa1.87□□□□□ -2.11
LOC1YFR001W HEK2P38199 381 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
LOC1YFR001W KAP114P53067 1004 aa1.87□□□□□ -2.11
LOC1YFR001W MAL13P53338 473 aa1.87□□□□□ -2.11
LOC1YFR001W COS6P53344 381 aa1.87□□□□□ -2.11
LOC1YFR001W AAH1P53909 347 aa1.87□□□□□ -2.11
LOC1YFR001W BOP2Q06150 570 aa1.87□□□□□ -2.11
LOC1YFR001W STH1P32597 1359 aa1.86□□□□□ -2.11
LOC1YFR001W MAL32P38158 584 aa1.86□□□□□ -2.11
LOC1YFR001W MAL12P53341 584 aa1.86□□□□□ -2.11
LOC1YFR001W EMI1Q04406 187 aa1.86□□□□□ -2.11
LOC1YFR001W PST1Q12355 444 aa1.86□□□□□ -2.11
LOC1YFR001W SSK22P25390 1331 aaPredicted RBP1.86□□□□□ -2.11
LOC1YFR001W HIS1P00498 297 aaKnown RBP1.85□□□□□ -2.11
LOC1YFR001W OM45P16547 393 aa1.85□□□□□ -2.11
LOC1YFR001W ECM13P38195 257 aa1.85□□□□□ -2.11
LOC1YFR001W RCY1P39531 840 aa1.85□□□□□ -2.11
LOC1YFR001W DDI1P40087 428 aa1.85□□□□□ -2.11
LOC1YFR001W TIF34P40217 347 aaKnown RBP1.85□□□□□ -2.11
LOC1YFR001W MRPL49P40858 161 aaPredicted RBP1.85□□□□□ -2.11
LOC1YFR001W DAN1P47178 298 aa1.85□□□□□ -2.11
LOC1YFR001W OST6Q03723 332 aa1.85□□□□□ -2.11
LOC1YFR001W PEX10Q05568 337 aa1.85□□□□□ -2.11
LOC1YFR001W SCO1P23833 295 aa1.84□□□□□ -2.11
LOC1YFR001W YHL026CP38740 315 aa1.84□□□□□ -2.11
LOC1YFR001W YJR012CP47087 207 aa1.84□□□□□ -2.11
LOC1YFR001W EMC2P47133 292 aaKnown RBP1.84□□□□□ -2.11
LOC1YFR001W SLD7Q08457 257 aa1.84□□□□□ -2.11
LOC1YFR001W COX2P00410 251 aa1.83□□□□□ -2.12
LOC1YFR001W RPL24AP04449 155 aaKnown RBP1.83□□□□□ -2.12
LOC1YFR001W RAD3P06839 778 aa1.83□□□□□ -2.12
LOC1YFR001W CWP1P28319 239 aa1.83□□□□□ -2.12
LOC1YFR001W NRG2P38082 220 aa1.83□□□□□ -2.12
LOC1YFR001W GRE3P38715 327 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
LOC1YFR001W PET100P38958 111 aa1.83□□□□□ -2.12
LOC1YFR001W DSN1P40568 576 aa1.83□□□□□ -2.12
LOC1YFR001W PEX12Q04370 399 aa1.83□□□□□ -2.12
LOC1YFR001W EMC6Q12431 108 aa1.83□□□□□ -2.12
LOC1YFR001W BEM2P39960 2167 aaKnown RBP1.82□□□□□ -2.12
LOC1YFR001W FKS1P38631 1876 aaKnown RBP1.82□□□□□ -2.12
LOC1YFR001W POX1P13711 748 aa1.82□□□□□ -2.12
LOC1YFR001W QRI5P32344 111 aa1.82□□□□□ -2.12
LOC1YFR001W MRPL37P36532 105 aa1.82□□□□□ -2.12
LOC1YFR001W RPL10P41805 221 aaKnown RBP1.82□□□□□ -2.12
LOC1YFR001W NBP1P52919 319 aaPredicted RBP1.82□□□□□ -2.12
LOC1YFR001W ALG11P53954 548 aaKnown RBP1.82□□□□□ -2.12
LOC1YFR001W RSM10Q03201 203 aa1.82□□□□□ -2.12
LOC1YFR001W EBS1Q03466 884 aaKnown RBP1.82□□□□□ -2.12
LOC1YFR001W DCR2Q05924 578 aa1.82□□□□□ -2.12
LOC1YFR001W YPL119C-AQ3E751 87 aa1.82□□□□□ -2.12
LOC1YFR001W SGA1P08019 549 aa1.81□□□□□ -2.12
LOC1YFR001W FCY21P40039 528 aa1.81□□□□□ -2.12
LOC1YFR001W YAR1P46683 200 aa1.81□□□□□ -2.12
LOC1YFR001W YJL118WP47022 219 aa1.81□□□□□ -2.12
LOC1YFR001W YGL034CP53186 121 aa1.81□□□□□ -2.12
LOC1YFR001W COX20Q04935 205 aa1.81□□□□□ -2.12
LOC1YFR001W YPR011CQ12251 326 aa1.81□□□□□ -2.12
LOC1YFR001W EMP46Q12396 444 aa1.81□□□□□ -2.12
LOC1YFR001W SNF8Q12483 233 aa1.81□□□□□ -2.12
LOC1YFR001W YBL008W-AQ3E821 79 aa1.81□□□□□ -2.12
LOC1YFR001W SAS5Q99314 248 aa1.81□□□□□ -2.12
LOC1YFR001W POL30P15873 258 aaKnown RBP1.8□□□□□ -2.12
LOC1YFR001W VPS3P23643 1011 aa1.8□□□□□ -2.12
LOC1YFR001W SCM4P32564 187 aa1.8□□□□□ -2.12
LOC1YFR001W YOR062CP36025 268 aa1.8□□□□□ -2.12
LOC1YFR001W PRS2P38620 318 aaKnown RBP1.8□□□□□ -2.12
LOC1YFR001W RTT105P40063 208 aa1.8□□□□□ -2.12
LOC1YFR001W OST2P46964 130 aa1.8□□□□□ -2.12
LOC1YFR001W MRP1P10662 321 aaKnown RBP1.79□□□□□ -2.12
LOC1YFR001W CCA1P21269 546 aa1.79□□□□□ -2.12
LOC1YFR001W DAL82P21705 255 aa1.79□□□□□ -2.12
LOC1YFR001W YCR102CP25608 368 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms