RNA–Protein interactions for RNA: YDR357C

CNL1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene CNL1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CNL1	YDR357C	YDR278C	Q05612	105 aa		4.2	□□□□□ -1.74
CNL1	YDR357C	PRP11	Q07350	266 aa	Predicted RBP	4.2	□□□□□ -1.74
CNL1	YDR357C	MCH4	Q08268	501 aa		4.2	□□□□□ -1.74
CNL1	YDR357C	YDL177C	Q12257	170 aa		4.2	□□□□□ -1.74
CNL1	YDR357C	UTP23	Q12339	254 aa	Known RBP	4.2	□□□□□ -1.74
CNL1	YDR357C	NCA2	Q12374	616 aa		4.2	□□□□□ -1.74
CNL1	YDR357C	NPC2	Q12408	173 aa		4.2	□□□□□ -1.74
CNL1	YDR357C	YPR064W	Q12492	139 aa		4.2	□□□□□ -1.74
CNL1	YDR357C	YIR021W-A	Q3E739	70 aa		4.2	□□□□□ -1.74
CNL1	YDR357C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.2	□□□□□ -1.74
CNL1	YDR357C	BI3	Q9ZZW7	517 aa		4.2	□□□□□ -1.74
CNL1	YDR357C	SUC2	P00724	532 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	YOL163W	P0CF20	169 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	FCY2	P17064	533 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	GRX2	P17695	143 aa	Known RBP	4.19	□□□□□ -1.74
CNL1	YDR357C	MCK1	P21965	375 aa	Known RBP	4.19	□□□□□ -1.74
CNL1	YDR357C	SPO11	P23179	398 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	MRPL9	P31334	269 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	MCR1	P36060	302 aa	Known RBP	4.19	□□□□□ -1.74
CNL1	YDR357C	YKL075C	P36083	450 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	YKR041W	P36134	250 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	MRPL24	P36525	258 aa	Predicted RBP	4.19	□□□□□ -1.74
CNL1	YDR357C	FRM2	P37261	193 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	ARC40	P38328	384 aa	Known RBP	4.19	□□□□□ -1.74
CNL1	YDR357C	LYS1	P38998	373 aa	RIP-Chip data	4.19	□□□□□ -1.74	not detected
CNL1	YDR357C	RIO2	P40160	425 aa	Known RBP	4.19	□□□□□ -1.74
CNL1	YDR357C	YMR144W	P40214	342 aa	Known RBP	4.19	□□□□□ -1.74
CNL1	YDR357C	YCH1	P42937	148 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	MOB2	P43563	287 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	GAT1	P43574	510 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	MNN10	P50108	393 aa	Known RBP	4.19	□□□□□ -1.74
CNL1	YDR357C	YGR151C	P53287	111 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	BUD32	P53323	261 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	SAE3	P89114	91 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	TRS23	Q03784	219 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	YPR098C	Q06089	161 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	YOL024W	Q08172	172 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	MDM32	Q12171	622 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	YOR214C	Q12282	236 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	YLR126C	Q12288	251 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	DET1	Q99288	334 aa	Known RBP	4.19	□□□□□ -1.74
CNL1	YDR357C	NUM1	Q00402	2748 aa		4.19	□□□□□ -1.74
CNL1	YDR357C	SCC2	Q04002	1493 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	NUP157	P40064	1391 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-H	O13535	1793 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-DR5	P0C2I2	1755 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-DR6	P0C2I3	1755 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-LR2	P0C2I5	1755 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-PR2	P0C2J0	1756 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-JR1	P47098	1755 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-ML2	Q03434	1755 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-ER1	Q03612	1755 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-ML1	Q04711	1755 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-GR2	Q12269	1755 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-OL	Q12273	1755 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	TY1B-PL	Q12414	1755 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	PBI2	P0CT04	75 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	HEM15	P16622	393 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	PHO80	P20052	293 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	CLB2	P24869	491 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	YCR023C	P25351	611 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	FUN26	P31381	517 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	MRPL3	P36516	390 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	TRM7	P38238	310 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	MTC4	P38335	694 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	YPT35	P38815	214 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	GLE2	P40066	365 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	LSM4	P40070	187 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	FAU1	P40099	211 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	PSA1	P41940	361 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	ASN1	P49089	572 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	CDH1	P53197	566 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	NMA2	P53204	395 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	ERG5	P54781	538 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	CCE1	Q03702	353 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	YMR166C	Q03829	368 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	SUE1	Q06524	206 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	MMT2	Q08970	484 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	YPL257W	Q08974	193 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	TAF10	Q12030	206 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	ATP16	Q12165	160 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	YDL009C	Q12210	107 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	AHA1	Q12449	350 aa	Known RBP	4.18	□□□□□ -1.74
CNL1	YDR357C	RAX2	Q12465	1220 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	YPL119C-A	Q3E751	87 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	IGO2	Q9P305	131 aa		4.18	□□□□□ -1.74
CNL1	YDR357C	RPL25	P04456	142 aa	Known RBP	4.17	□□□□□ -1.74
CNL1	YDR357C	BAR1	P12630	587 aa		4.17	□□□□□ -1.74
CNL1	YDR357C	GCN3	P14741	305 aa		4.17	□□□□□ -1.74
CNL1	YDR357C	STE4	P18851	423 aa		4.17	□□□□□ -1.74
CNL1	YDR357C	RPS1B	P23248	255 aa	Known RBP	4.17	□□□□□ -1.74
CNL1	YDR357C	SCO1	P23833	295 aa		4.17	□□□□□ -1.74
CNL1	YDR357C	SPT4	P32914	102 aa	Predicted RBP	4.17	□□□□□ -1.74
CNL1	YDR357C	HIS7	P33734	552 aa	Known RBP	4.17	□□□□□ -1.74
CNL1	YDR357C	YKL097C	P34245	136 aa		4.17	□□□□□ -1.74
CNL1	YDR357C	LAG1	P38703	411 aa		4.17	□□□□□ -1.74
CNL1	YDR357C	GEP4	P38812	185 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms