RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	YGL039W	P53183	348 aa	Known RBP	4.65	□□□□□ -1.67
SNF11	YDR073W	SPT15	P13393	240 aa	Known RBP	4.64	□□□□□ -1.67
SNF11	YDR073W	ATG15	P25641	520 aa		4.64	□□□□□ -1.67
SNF11	YDR073W	YKL075C	P36083	450 aa		4.64	□□□□□ -1.67
SNF11	YDR073W	RFT1	P38206	574 aa	Predicted RBP	4.64	□□□□□ -1.67
SNF11	YDR073W	EFM1	P38732	585 aa		4.64	□□□□□ -1.67
SNF11	YDR073W	TIM17	P39515	158 aa		4.64	□□□□□ -1.67
SNF11	YDR073W	NUP57	P48837	541 aa		4.64	□□□□□ -1.67
SNF11	YDR073W	YMR166C	Q03829	368 aa		4.64	□□□□□ -1.67
SNF11	YDR073W	BCY1	P07278	416 aa	Known RBP	4.63	□□□□□ -1.67
SNF11	YDR073W	SNF6	P18888	332 aa		4.63	□□□□□ -1.67
SNF11	YDR073W	IMP1	P28627	190 aa		4.63	□□□□□ -1.67
SNF11	YDR073W	EHD3	P28817	500 aa		4.63	□□□□□ -1.67
SNF11	YDR073W	FRM2	P37261	193 aa		4.63	□□□□□ -1.67
SNF11	YDR073W	AVT7	P40501	490 aa		4.63	□□□□□ -1.67
SNF11	YDR073W	REE1	P40893	198 aa		4.63	□□□□□ -1.67
SNF11	YDR073W	YDR115W	Q04598	105 aa		4.63	□□□□□ -1.67
SNF11	YDR073W	YPR147C	Q06522	304 aa	Known RBP	4.63	□□□□□ -1.67
SNF11	YDR073W	YDL144C	Q07589	356 aa		4.63	□□□□□ -1.67
SNF11	YDR073W	COQ10	Q08058	207 aa		4.63	□□□□□ -1.67
SNF11	YDR073W	NDD1	Q08887	554 aa		4.63	□□□□□ -1.67
SNF11	YDR073W	FDH1	Q08911	376 aa		4.63	□□□□□ -1.67
SNF11	YDR073W	YBR298C-A	Q8TGK4	73 aa		4.63	□□□□□ -1.67
SNF11	YDR073W	YKR104W	P0CE69	306 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	ASP3-2	P0CX77	362 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	ASP3-3	P0CX78	362 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	ASP3-4	P0CX79	362 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	ASP3-1	P0CZ17	362 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	FBA1	P14540	359 aa	Known RBP	4.62	□□□□□ -1.67
SNF11	YDR073W	PPH21	P23594	369 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	MRPL3	P36516	390 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	MRPL39	P36533	70 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	BAT1	P38891	393 aa	Known RBP	4.62	□□□□□ -1.67
SNF11	YDR073W	SNZ2	P53824	298 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	FYV6	P53913	173 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	SDC1	Q03323	175 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	SPG4	Q04438	115 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	LOA1	Q06508	300 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	RRP40	Q08285	240 aa	Known RBP	4.62	□□□□□ -1.67
SNF11	YDR073W	YOR376W	Q08900	122 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	TUS1	Q06412	1307 aa		4.62	□□□□□ -1.67
SNF11	YDR073W	CDC50	P25656	391 aa		4.61	□□□□□ -1.67
SNF11	YDR073W	YMR144W	P40214	342 aa	Known RBP	4.61	□□□□□ -1.67
SNF11	YDR073W	BMT5	P40493	336 aa		4.61	□□□□□ -1.67
SNF11	YDR073W	ERG10	P41338	398 aa	Known RBP	4.61	□□□□□ -1.67
SNF11	YDR073W	SNZ3	P43545	298 aa		4.61	□□□□□ -1.67
SNF11	YDR073W	PRP24	P49960	444 aa	Known RBP	4.61	□□□□□ -1.67
SNF11	YDR073W	FMP48	P53233	369 aa		4.61	□□□□□ -1.67
SNF11	YDR073W	YLR152C	P54072	576 aa		4.61	□□□□□ -1.67
SNF11	YDR073W	RPL21A	Q02753	160 aa	Known RBP	4.61	□□□□□ -1.67
SNF11	YDR073W	MRX11	Q03079	207 aa		4.61	□□□□□ -1.67
SNF11	YDR073W	PRM15	Q03262	622 aa		4.61	□□□□□ -1.67
SNF11	YDR073W	LIP2	Q06005	328 aa		4.61	□□□□□ -1.67
SNF11	YDR073W	SPT3	P06844	337 aa		4.6	□□□□□ -1.67
SNF11	YDR073W	YHL049C	P38722	271 aa		4.6	□□□□□ -1.67
SNF11	YDR073W	MIG3	P39943	394 aa		4.6	□□□□□ -1.67
SNF11	YDR073W	YIL012W	P40551	113 aa		4.6	□□□□□ -1.67
SNF11	YDR073W	YFL064C	P43540	174 aa		4.6	□□□□□ -1.67
SNF11	YDR073W	SLX9	P53251	210 aa	Predicted RBP	4.6	□□□□□ -1.67
SNF11	YDR073W	YPL113C	Q02961	396 aa		4.6	□□□□□ -1.67
SNF11	YDR073W	UTP15	Q04305	513 aa	Known RBP	4.6	□□□□□ -1.67
SNF11	YDR073W	YMR317W	Q04893	1140 aa		4.6	□□□□□ -1.67
SNF11	YDR073W	DXO1	Q06349	442 aa		4.6	□□□□□ -1.67
SNF11	YDR073W	RPL35A	P0CX84	120 aa	Known RBP	4.59	□□□□□ -1.67
SNF11	YDR073W	RPL35B	P0CX85	120 aa	Known RBP	4.59	□□□□□ -1.67
SNF11	YDR073W	YCR025C	P25352	136 aa		4.59	□□□□□ -1.67
SNF11	YDR073W	VPH2	P32341	215 aa		4.59	□□□□□ -1.67
SNF11	YDR073W	CAT2	P32796	670 aa	Known RBP	4.59	□□□□□ -1.67
SNF11	YDR073W	SUR2	P38992	349 aa		4.59	□□□□□ -1.67
SNF11	YDR073W	IRC18	P47056	224 aa		4.59	□□□□□ -1.67
SNF11	YDR073W	MCM22	P47167	239 aa		4.59	□□□□□ -1.67
SNF11	YDR073W	BRR6	P53062	197 aa		4.59	□□□□□ -1.67
SNF11	YDR073W	YGL159W	P53110	370 aa		4.59	□□□□□ -1.67
SNF11	YDR073W	SEI1	Q06058	285 aa		4.59	□□□□□ -1.67
SNF11	YDR073W	GRE1	Q08969	168 aa		4.59	□□□□□ -1.67
SNF11	YDR073W	URA6	P15700	204 aa		4.58	□□□□□ -1.68
SNF11	YDR073W	DPB2	P24482	689 aa	Predicted RBP	4.58	□□□□□ -1.68
SNF11	YDR073W	DRE2	P36152	348 aa		4.58	□□□□□ -1.68
SNF11	YDR073W	RFS1	P38234	210 aa	Known RBP	4.58	□□□□□ -1.68
SNF11	YDR073W	SHE3	P38272	425 aa	Known RBP	4.58	□□□□□ -1.68
SNF11	YDR073W	OM14	P38325	134 aa		4.58	□□□□□ -1.68
SNF11	YDR073W	GGC1	P38988	300 aa		4.58	□□□□□ -1.68
SNF11	YDR073W	IGD1	P43598	195 aa		4.58	□□□□□ -1.68
SNF11	YDR073W	FMP41	P53889	259 aa	Known RBP	4.58	□□□□□ -1.68
SNF11	YDR073W	RMI1	Q02685	241 aa		4.58	□□□□□ -1.68
SNF11	YDR073W	YAK1	P14680	807 aa		4.57	□□□□□ -1.68
SNF11	YDR073W	YCR087C-A	P37263	153 aa		4.57	□□□□□ -1.68
SNF11	YDR073W	POP8	P38208	133 aa		4.57	□□□□□ -1.68
SNF11	YDR073W	UTP18	P40362	594 aa	Predicted RBP	4.57	□□□□□ -1.68
SNF11	YDR073W	YET3	Q07451	203 aa		4.57	□□□□□ -1.68
SNF11	YDR073W	TPO4	Q12256	659 aa		4.57	□□□□□ -1.68
SNF11	YDR073W	DRS2	P39524	1355 aa		4.56	□□□□□ -1.68
SNF11	YDR073W	COX5A	P00424	153 aa		4.56	□□□□□ -1.68
SNF11	YDR073W	SNA3	P14359	133 aa		4.56	□□□□□ -1.68
SNF11	YDR073W	PHO89	P38361	574 aa		4.56	□□□□□ -1.68
SNF11	YDR073W	YJL016W	P47072	561 aa		4.56	□□□□□ -1.68
SNF11	YDR073W	YJR149W	P47177	404 aa		4.56	□□□□□ -1.68
SNF11	YDR073W	MMS2	P53152	137 aa		4.56	□□□□□ -1.68
SNF11	YDR073W	INP1	Q03694	420 aa		4.56	□□□□□ -1.68
SNF11	YDR073W	API2	Q04413	109 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 176 ms