RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C YLR099W-AQ3E798 87 aa3.5□□□□□ -1.85
PRP11YDL043C YCL012CQ8J0M4 134 aa3.5□□□□□ -1.85
PRP11YDL043C MEX67Q99257 599 aaKnown RBP3.5□□□□□ -1.85
PRP11YDL043C YCF1P39109 1515 aaKnown RBP3.49□□□□□ -1.85
PRP11YDL043C RHO1P06780 209 aaKnown RBP3.49□□□□□ -1.85
PRP11YDL043C ERD2P18414 219 aa3.49□□□□□ -1.85
PRP11YDL043C ARO7P32178 256 aa3.49□□□□□ -1.85
PRP11YDL043C SCM4P32564 187 aa3.49□□□□□ -1.85
PRP11YDL043C FRE2P36033 711 aa3.49□□□□□ -1.85
PRP11YDL043C YCR041WP37265 110 aa3.49□□□□□ -1.85
PRP11YDL043C PRS3P38689 320 aaKnown RBP3.49□□□□□ -1.85
PRP11YDL043C YHR127WP38833 243 aaKnown RBP3.49□□□□□ -1.85
PRP11YDL043C LYS1P38998 373 aaRIP-Chip data3.49□□□□□ -1.85not detected
PRP11YDL043C END3P39013 349 aa3.49□□□□□ -1.85
PRP11YDL043C HAT2P39984 401 aa3.49□□□□□ -1.85
PRP11YDL043C ERG28P40030 148 aa3.49□□□□□ -1.85
PRP11YDL043C DSE1P40077 573 aa3.49□□□□□ -1.85
PRP11YDL043C XBP1P40489 647 aa3.49□□□□□ -1.85
PRP11YDL043C YIR016WP40572 265 aa3.49□□□□□ -1.85
PRP11YDL043C YIR035CP40579 254 aa3.49□□□□□ -1.85
PRP11YDL043C TRM9P49957 279 aa3.49□□□□□ -1.85
PRP11YDL043C YGL185CP53100 379 aa3.49□□□□□ -1.85
PRP11YDL043C FLC3P53121 802 aa3.49□□□□□ -1.85
PRP11YDL043C TPS1Q00764 495 aaKnown RBP3.49□□□□□ -1.85
PRP11YDL043C SNO1Q03144 224 aa3.49□□□□□ -1.85
PRP11YDL043C GAS2Q06135 555 aa3.49□□□□□ -1.85
PRP11YDL043C ATG39Q06159 398 aa3.49□□□□□ -1.85
PRP11YDL043C CNL1Q06333 122 aa3.49□□□□□ -1.85
PRP11YDL043C YPR078CQ06813 372 aa3.49□□□□□ -1.85
PRP11YDL043C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
PRP11YDL043C YLR036CQ07986 203 aa3.49□□□□□ -1.85
PRP11YDL043C TPO4Q12256 659 aa3.49□□□□□ -1.85
PRP11YDL043C TRM10Q12400 293 aa3.49□□□□□ -1.85
PRP11YDL043C FSH3Q99369 266 aa3.49□□□□□ -1.85
PRP11YDL043C TY2B-LR1P0C2J3 1770 aa3.48□□□□□ -1.85
PRP11YDL043C TY2B-FP0CX63 1770 aa3.48□□□□□ -1.85
PRP11YDL043C TY2B-GR2P0CX64 1770 aa3.48□□□□□ -1.85
PRP11YDL043C TY2B-CP25384 1770 aa3.48□□□□□ -1.85
PRP11YDL043C TY2B-DR2Q03494 1770 aa3.48□□□□□ -1.85
PRP11YDL043C TY1B-DR1Q03855 1755 aa3.48□□□□□ -1.85
PRP11YDL043C TY2B-DR3Q07791 1770 aaKnown RBP3.48□□□□□ -1.85
PRP11YDL043C TY2B-OR1Q12113 1770 aa3.48□□□□□ -1.85
PRP11YDL043C TY2B-DR1Q12472 1770 aa3.48□□□□□ -1.85
PRP11YDL043C TY2B-BQ12491 1770 aa3.48□□□□□ -1.85
PRP11YDL043C TY2B-OR2Q12501 1770 aa3.48□□□□□ -1.85
PRP11YDL043C TY1B-DR3Q99231 1755 aa3.48□□□□□ -1.85
PRP11YDL043C THP2O13539 261 aaKnown RBP3.48□□□□□ -1.85
PRP11YDL043C YAR066WP0CX18 203 aa3.48□□□□□ -1.85
PRP11YDL043C YHR214WP0CX19 203 aa3.48□□□□□ -1.85
PRP11YDL043C YFL068WP0CX99 160 aa3.48□□□□□ -1.85
PRP11YDL043C YLL066W-AP0CY00 160 aa3.48□□□□□ -1.85
PRP11YDL043C YLL067W-AP0CY01 160 aa3.48□□□□□ -1.85
PRP11YDL043C SAM2P19358 384 aaKnown RBP3.48□□□□□ -1.85
PRP11YDL043C PHO13P19881 312 aa3.48□□□□□ -1.85
PRP11YDL043C YCR023CP25351 611 aa3.48□□□□□ -1.85
PRP11YDL043C YCR100CP25606 316 aa3.48□□□□□ -1.85
PRP11YDL043C MRP49P32388 137 aa3.48□□□□□ -1.85
PRP11YDL043C COS9P36034 407 aa3.48□□□□□ -1.85
PRP11YDL043C DRE2P36152 348 aa3.48□□□□□ -1.85
PRP11YDL043C PRS4P38063 326 aaPredicted RBP3.48□□□□□ -1.85
PRP11YDL043C YBR139WP38109 508 aa3.48□□□□□ -1.85
PRP11YDL043C RIM2P38127 377 aa3.48□□□□□ -1.85
PRP11YDL043C LDB7P38210 180 aa3.48□□□□□ -1.85
PRP11YDL043C RFC2P40348 353 aa3.48□□□□□ -1.85
PRP11YDL043C AZF1P41696 914 aa3.48□□□□□ -1.85
PRP11YDL043C PMT4P46971 762 aa3.48□□□□□ -1.85
PRP11YDL043C DIE2P50076 525 aa3.48□□□□□ -1.85
PRP11YDL043C RIB4P50861 169 aaPredicted RBP3.48□□□□□ -1.85
PRP11YDL043C CWC23P52868 283 aaPredicted RBP3.48□□□□□ -1.85
PRP11YDL043C TRM112P53738 135 aaPredicted RBP3.48□□□□□ -1.85
PRP11YDL043C UBC7Q02159 165 aa3.48□□□□□ -1.85
PRP11YDL043C SPP2Q02521 185 aa3.48□□□□□ -1.85
PRP11YDL043C YPL077CQ02831 240 aa3.48□□□□□ -1.85
PRP11YDL043C ODC1Q03028 310 aa3.48□□□□□ -1.85
PRP11YDL043C TDA1Q03533 586 aa3.48□□□□□ -1.85
PRP11YDL043C NUP53Q03790 475 aa3.48□□□□□ -1.85
PRP11YDL043C YML096WQ04489 525 aa3.48□□□□□ -1.85
PRP11YDL043C SMA2Q04658 369 aa3.48□□□□□ -1.85
PRP11YDL043C DPP1Q05521 289 aa3.48□□□□□ -1.85
PRP11YDL043C SLD7Q08457 257 aa3.48□□□□□ -1.85
PRP11YDL043C YLR050CQ12155 161 aaKnown RBP3.48□□□□□ -1.85
PRP11YDL043C RNH203Q12338 110 aa3.48□□□□□ -1.85
PRP11YDL043C JLP1Q12358 412 aa3.48□□□□□ -1.85
PRP11YDL043C GTT2Q12390 233 aa3.48□□□□□ -1.85
PRP11YDL043C PRM4Q12498 284 aa3.48□□□□□ -1.85
PRP11YDL043C RMD5Q12508 421 aa3.48□□□□□ -1.85
PRP11YDL043C FOL3Q12676 427 aaPredicted RBP3.48□□□□□ -1.85
PRP11YDL043C YKL183C-AQ3E765 70 aa3.48□□□□□ -1.85
PRP11YDL043C ADH2P00331 348 aaKnown RBP3.47□□□□□ -1.85
PRP11YDL043C BCY1P07278 416 aaKnown RBP3.47□□□□□ -1.85
PRP11YDL043C PUT1P09368 476 aa3.47□□□□□ -1.85
PRP11YDL043C RPL31AP0C2H8 113 aaKnown RBP3.47□□□□□ -1.85
PRP11YDL043C GLN3P18494 730 aa3.47□□□□□ -1.85
PRP11YDL043C SAG1P20840 650 aa3.47□□□□□ -1.85
PRP11YDL043C DAL82P21705 255 aa3.47□□□□□ -1.85
PRP11YDL043C LSB5P25369 354 aa3.47□□□□□ -1.85
PRP11YDL043C POF1P25576 258 aa3.47□□□□□ -1.85
PRP11YDL043C CDC50P25656 391 aa3.47□□□□□ -1.85
PRP11YDL043C AEP1P32493 518 aa3.47□□□□□ -1.85
PRP11YDL043C CAT2P32796 670 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms