RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	SPT3	P06844	337 aa		4.12	□□□□□ -1.75
SMP1	YBR182C	RPL35A	P0CX84	120 aa	Known RBP	4.12	□□□□□ -1.75
SMP1	YBR182C	RPL35B	P0CX85	120 aa	Known RBP	4.12	□□□□□ -1.75
SMP1	YBR182C	CAM1	P29547	415 aa	Known RBP	4.12	□□□□□ -1.75
SMP1	YBR182C	VPH2	P32341	215 aa		4.12	□□□□□ -1.75
SMP1	YBR182C	MBA1	P38300	278 aa		4.12	□□□□□ -1.75
SMP1	YBR182C	GOS1	P38736	223 aa		4.12	□□□□□ -1.75
SMP1	YBR182C	BMT5	P40493	336 aa		4.12	□□□□□ -1.75
SMP1	YBR182C	IRC18	P47056	224 aa		4.12	□□□□□ -1.75
SMP1	YBR182C	TRM9	P49957	279 aa		4.12	□□□□□ -1.75
SMP1	YBR182C	YGR015C	P53208	328 aa		4.12	□□□□□ -1.75
SMP1	YBR182C	SKI8	Q02793	397 aa	Predicted RBP	4.12	□□□□□ -1.75
SMP1	YBR182C	PPT2	Q12036	173 aa		4.12	□□□□□ -1.75
SMP1	YBR182C	YLR126C	Q12288	251 aa		4.12	□□□□□ -1.75
SMP1	YBR182C	YER078W-A	Q3E7A2	54 aa		4.12	□□□□□ -1.75
SMP1	YBR182C	EHD3	P28817	500 aa		4.11	□□□□□ -1.75
SMP1	YBR182C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SMP1	YBR182C	EFM1	P38732	585 aa		4.11	□□□□□ -1.75
SMP1	YBR182C	SNZ2	P53824	298 aa		4.11	□□□□□ -1.75
SMP1	YBR182C	HRI1	Q05905	244 aa	Known RBP	4.11	□□□□□ -1.75
SMP1	YBR182C	ARR2	Q06597	130 aa		4.11	□□□□□ -1.75
SMP1	YBR182C	YET3	Q07451	203 aa		4.11	□□□□□ -1.75
SMP1	YBR182C	TLG2	Q08144	397 aa		4.11	□□□□□ -1.75
SMP1	YBR182C	MMT2	Q08970	484 aa		4.11	□□□□□ -1.75
SMP1	YBR182C	SIR4	P11978	1358 aa		4.1	□□□□□ -1.75
SMP1	YBR182C	BGL2	P15703	313 aa	Known RBP	4.1	□□□□□ -1.75
SMP1	YBR182C	PPH21	P23594	369 aa		4.1	□□□□□ -1.75
SMP1	YBR182C	DPB2	P24482	689 aa	Predicted RBP	4.1	□□□□□ -1.75
SMP1	YBR182C	YBL059W	P34224	193 aa		4.1	□□□□□ -1.75
SMP1	YBR182C	MRPL39	P36533	70 aa		4.1	□□□□□ -1.75
SMP1	YBR182C	SOL2	P37262	315 aa		4.1	□□□□□ -1.75
SMP1	YBR182C	MAK5	P38112	773 aa	Predicted RBP	4.1	□□□□□ -1.75
SMP1	YBR182C	RFT1	P38206	574 aa	Predicted RBP	4.1	□□□□□ -1.75
SMP1	YBR182C	SEN34	P39707	275 aa		4.1	□□□□□ -1.75
SMP1	YBR182C	STB1	P42845	420 aa		4.1	□□□□□ -1.75
SMP1	YBR182C	MCM22	P47167	239 aa		4.1	□□□□□ -1.75
SMP1	YBR182C	PRP24	P49960	444 aa	Known RBP	4.1	□□□□□ -1.75
SMP1	YBR182C	SLX9	P53251	210 aa	Predicted RBP	4.1	□□□□□ -1.75
SMP1	YBR182C	RNH201	P53942	307 aa		4.1	□□□□□ -1.75
SMP1	YBR182C	YLR152C	P54072	576 aa		4.1	□□□□□ -1.75
SMP1	YBR182C	SPG4	Q04438	115 aa		4.1	□□□□□ -1.75
SMP1	YBR182C	YPR147C	Q06522	304 aa	Known RBP	4.1	□□□□□ -1.75
SMP1	YBR182C	BRX1	Q08235	291 aa	Known RBP	4.1	□□□□□ -1.75
SMP1	YBR182C	RPL21B	Q12672	160 aa	Known RBP	4.1	□□□□□ -1.75
SMP1	YBR182C	TUS1	Q06412	1307 aa		4.1	□□□□□ -1.75
SMP1	YBR182C	YKR104W	P0CE69	306 aa		4.09	□□□□□ -1.75
SMP1	YBR182C	UBC6	P33296	250 aa	Predicted RBP	4.09	□□□□□ -1.75
SMP1	YBR182C	SHE1	P38200	338 aa		4.09	□□□□□ -1.75
SMP1	YBR182C	YMR144W	P40214	342 aa	Known RBP	4.09	□□□□□ -1.75
SMP1	YBR182C	POG1	P40473	351 aa		4.09	□□□□□ -1.75
SMP1	YBR182C	SNZ3	P43545	298 aa		4.09	□□□□□ -1.75
SMP1	YBR182C	BRR6	P53062	197 aa		4.09	□□□□□ -1.75
SMP1	YBR182C	ELP3	Q02908	557 aa	Known RBP	4.09	□□□□□ -1.75
SMP1	YBR182C	SDC1	Q03323	175 aa		4.09	□□□□□ -1.75
SMP1	YBR182C	LOA1	Q06508	300 aa		4.09	□□□□□ -1.75
SMP1	YBR182C	YPL278C	Q08990	100 aa		4.09	□□□□□ -1.75
SMP1	YBR182C	ERV2	Q12284	196 aa		4.09	□□□□□ -1.75
SMP1	YBR182C	URA6	P15700	204 aa		4.08	□□□□□ -1.76
SMP1	YBR182C	ATG15	P25641	520 aa		4.08	□□□□□ -1.76
SMP1	YBR182C	ARO2	P28777	376 aa	Known RBP	4.08	□□□□□ -1.76
SMP1	YBR182C	MRPL3	P36516	390 aa		4.08	□□□□□ -1.76
SMP1	YBR182C	FRM2	P37261	193 aa		4.08	□□□□□ -1.76
SMP1	YBR182C	OXA1	P39952	402 aa		4.08	□□□□□ -1.76
SMP1	YBR182C	AVT7	P40501	490 aa		4.08	□□□□□ -1.76
SMP1	YBR182C	YFL064C	P43540	174 aa		4.08	□□□□□ -1.76
SMP1	YBR182C	YJL016W	P47072	561 aa		4.08	□□□□□ -1.76
SMP1	YBR182C	UTP15	Q04305	513 aa	Known RBP	4.08	□□□□□ -1.76
SMP1	YBR182C	SEI1	Q06058	285 aa		4.08	□□□□□ -1.76
SMP1	YBR182C	DXO1	Q06349	442 aa		4.08	□□□□□ -1.76
SMP1	YBR182C	ASP3-2	P0CX77	362 aa		4.07	□□□□□ -1.76
SMP1	YBR182C	ASP3-3	P0CX78	362 aa		4.07	□□□□□ -1.76
SMP1	YBR182C	ASP3-4	P0CX79	362 aa		4.07	□□□□□ -1.76
SMP1	YBR182C	ASP3-1	P0CZ17	362 aa		4.07	□□□□□ -1.76
SMP1	YBR182C	SPT15	P13393	240 aa	Known RBP	4.07	□□□□□ -1.76
SMP1	YBR182C	SNA3	P14359	133 aa		4.07	□□□□□ -1.76
SMP1	YBR182C	AAT2	P23542	418 aa	Known RBP	4.07	□□□□□ -1.76
SMP1	YBR182C	IMP1	P28627	190 aa		4.07	□□□□□ -1.76
SMP1	YBR182C	DRE2	P36152	348 aa		4.07	□□□□□ -1.76
SMP1	YBR182C	YCR087C-A	P37263	153 aa		4.07	□□□□□ -1.76
SMP1	YBR182C	SHG1	P38337	142 aa		4.07	□□□□□ -1.76
SMP1	YBR182C	REE1	P40893	198 aa		4.07	□□□□□ -1.76
SMP1	YBR182C	YJR141W	P47172	347 aa	Predicted RBP	4.07	□□□□□ -1.76
SMP1	YBR182C	TPO4	Q12256	659 aa		4.07	□□□□□ -1.76
SMP1	YBR182C	PHO2	P07269	559 aa		4.06	□□□□□ -1.76
SMP1	YBR182C	CAF4	P36130	643 aa		4.06	□□□□□ -1.76
SMP1	YBR182C	YHL049C	P38722	271 aa		4.06	□□□□□ -1.76
SMP1	YBR182C	SRP14	P38985	146 aa		4.06	□□□□□ -1.76
SMP1	YBR182C	OST3	P48439	350 aa		4.06	□□□□□ -1.76
SMP1	YBR182C	MMS2	P53152	137 aa		4.06	□□□□□ -1.76
SMP1	YBR182C	YPL113C	Q02961	396 aa		4.06	□□□□□ -1.76
SMP1	YBR182C	RRP40	Q08285	240 aa	Known RBP	4.06	□□□□□ -1.76
SMP1	YBR182C	FDH1	Q08911	376 aa		4.06	□□□□□ -1.76
SMP1	YBR182C	CDC50	P25656	391 aa		4.05	□□□□□ -1.76
SMP1	YBR182C	FES1	P38260	290 aa		4.05	□□□□□ -1.76
SMP1	YBR182C	SHE3	P38272	425 aa	Known RBP	4.05	□□□□□ -1.76
SMP1	YBR182C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
SMP1	YBR182C	TIM17	P39515	158 aa		4.05	□□□□□ -1.76
SMP1	YBR182C	YJR149W	P47177	404 aa		4.05	□□□□□ -1.76
SMP1	YBR182C	YIP3	P53633	176 aa		4.05	□□□□□ -1.76
SMP1	YBR182C	PDR17	P53844	350 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms