RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 IGSF9BQ9UPX0 1349 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 PES1O00541 588 aaKnown RBP18.76■□□□□ 0.59
PHGDH-234ENST00000642041 LGR5O75473 907 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 TXNP10599 105 aaKnown RBP18.76■□□□□ 0.59
PHGDH-234ENST00000642041 NR2F2P24468 414 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 PSMC2P35998 433 aaKnown RBP18.76■□□□□ 0.59
PHGDH-234ENST00000642041 GTF2BQ00403 316 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 SIGLEC14Q08ET2 396 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 HYAL1Q12794 435 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 DMP1Q13316 513 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-234ENST00000642041 LAMC2Q13753 1193 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 SMYD5Q6GMV2 418 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 SWSAP1Q6NVH7 229 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 TRAF7Q6Q0C0 670 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 COPS5Q92905 334 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 ATP6V0A4Q9HBG4 840 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 INTS13Q9NVM9 706 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 TBC1D7Q9P0N9 293 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 ARMCX3Q9UH62 379 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-234ENST00000642041 CD207Q9UJ71 328 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 DDX41Q9UJV9 622 aaKnown RBP18.76■□□□□ 0.59
PHGDH-234ENST00000642041 CAPN11Q9UMQ6 739 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 TRPC6Q9Y210 931 aa18.76■□□□□ 0.59
PHGDH-234ENST00000642041 GTPBP10A4D1E9 387 aaKnown RBP18.75■□□□□ 0.59
PHGDH-234ENST00000642041 PRR23AA6NEV1 266 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 LOC730098B7Z3J9 87 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 H0Y858 1186 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 OFD1O75665 1012 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 GGPS1O95749 300 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 TRIM21P19474 475 aaKnown RBP18.75■□□□□ 0.59
PHGDH-234ENST00000642041 STAT5BP51692 787 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 ZBED6P86452 979 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 CCZ1BP86790 482 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 CCZ1P86791 482 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-234ENST00000642041 CETN1Q12798 172 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 MBTPS1Q14703 1052 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 ARID5BQ14865 1188 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 ARMCX5Q6P1M9 558 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 SYCP3Q8IZU3 236 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 TCP11Q8WWU5 503 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 SLC7A3Q8WY07 619 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 BBXQ8WY36 941 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-234ENST00000642041 STRA6Q9BX79 667 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 CYP26B1Q9NR63 512 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 TLR9Q9NR96 1032 aa18.75■□□□□ 0.59
PHGDH-234ENST00000642041 NPHP3-ACAD11A0A0J9YXS1 232 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 NOP56O00567 594 aaKnown RBP18.74■□□□□ 0.59
PHGDH-234ENST00000642041 MFAP3LO75121 409 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 TBX10O75333 385 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 GH1P01241 217 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 OATP04181 439 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 FECHP22830 423 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 CDK17Q00537 523 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 CBX2Q14781 532 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-234ENST00000642041 HSP90AA4PQ58FG1 418 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 DNTTIP2Q5QJE6 756 aaKnown RBP18.74■□□□□ 0.59
PHGDH-234ENST00000642041 CELF3Q5SZQ8 465 aaKnown RBP18.74■□□□□ 0.59
PHGDH-234ENST00000642041 CCDC62Q6P9F0 684 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 CYP26C1Q6V0L0 522 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 CYFIP1Q7L576 1253 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 TRIM59Q8IWR1 403 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 DHX37Q8IY37 1157 aaKnown RBP18.74■□□□□ 0.59
PHGDH-234ENST00000642041 TC2NQ8N9U0 490 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 ASIC4Q96FT7 647 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 ZNF830Q96NB3 372 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-234ENST00000642041 YME1L1Q96TA2 773 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 LMAN2LQ9H0V9 348 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 SMARCAD1Q9H4L7 1026 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 KIAA1586Q9HCI6 787 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 GTF2IRD1Q9UHL9 959 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 EPG5Q9HCE0 2579 aa18.74■□□□□ 0.59
PHGDH-234ENST00000642041 MYH9P35579 1960 aaKnown RBP18.73■□□□□ 0.59
PHGDH-234ENST00000642041 MYH11P35749 1972 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 NLRC5Q86WI3 1866 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 COL4A6Q14031 1691 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 TEX33O43247 280 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 N4BP1O75113 896 aaKnown RBP18.73■□□□□ 0.59
PHGDH-234ENST00000642041 PPP1R37O75864 691 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 ARIH2O95376 493 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 NR3C1P04150 777 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 NCKAP1LP55160 1127 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 PTK7Q13308 1070 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 TRIM71Q2Q1W2 868 aaKnown RBP18.73■□□□□ 0.59
PHGDH-234ENST00000642041 ZNF618Q5T7W0 954 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 DBF4BQ8NFT6 615 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 KAT2BQ92831 832 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 TOP1MTQ969P6 601 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 PCMTD1Q96MG8 357 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-234ENST00000642041 WRAP73Q9P2S5 460 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-234ENST00000642041 MYO6Q9UM54 1294 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 PAXBP1Q9Y5B6 917 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 WDR87Q6ZQQ6 2873 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 EMSYQ7Z589 1322 aa18.73■□□□□ 0.59
PHGDH-234ENST00000642041 K7ENM7 598 aa18.72■□□□□ 0.59
PHGDH-234ENST00000642041 P4HA2O15460 535 aa18.72■□□□□ 0.59
PHGDH-234ENST00000642041 USO1O60763 962 aaKnown RBP18.72■□□□□ 0.59
PHGDH-234ENST00000642041 PRPF6O94906 941 aaKnown RBP18.72■□□□□ 0.59
PHGDH-234ENST00000642041 IPO7O95373 1038 aaKnown RBP18.72■□□□□ 0.59
PHGDH-234ENST00000642041 NBL1P41271 181 aa18.72■□□□□ 0.59
PHGDH-234ENST00000642041 SP2Q02086 613 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms