RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 USP41Q3LFD5 358 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 RTP2Q5QGT7 225 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 ELMSAN1Q6PJG2 1045 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 NOSTRINQ8IVI9 506 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 CMASQ8NFW8 434 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-213ENST00000641272 DEPTORQ8TB45 409 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 ZNF707Q96C28 371 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-213ENST00000641272 PRIMPOLQ96LW4 560 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 NACC1Q96RE7 527 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 MYADMQ96S97 322 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 POLR3CQ9BUI4 534 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-213ENST00000641272 KCNK12Q9HB15 430 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 PIDD1Q9HB75 910 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 CHST7Q9NS84 486 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 FBXL21Q9UKT6 434 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 DUSP12Q9UNI6 340 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 GDAQ9Y2T3 454 aa18.46■□□□□ 0.55
PHGDH-213ENST00000641272 SF3B1O75533 1304 aaKnown RBP eCLIP18.46■□□□□ 0.558e-6■■■■■ 107
PHGDH-213ENST00000641272 ZMYM2Q9UBW7 1377 aa18.45■□□□□ 0.54
PHGDH-213ENST00000641272 TRIP11Q15643 1979 aa18.45■□□□□ 0.54
PHGDH-213ENST00000641272 GFRA3O60609 400 aa18.45■□□□□ 0.54
PHGDH-213ENST00000641272 TADA2AO75478 443 aa18.45■□□□□ 0.54
PHGDH-213ENST00000641272 XRCC6P12956 609 aaKnown RBP eCLIP18.45■□□□□ 0.545e-6■■□□□ 11.5
PHGDH-213ENST00000641272 CCT6AP40227 531 aaKnown RBP18.45■□□□□ 0.54
PHGDH-213ENST00000641272 TUSC3Q13454 348 aa18.45■□□□□ 0.54
PHGDH-213ENST00000641272 TDGQ13569 410 aa18.45■□□□□ 0.54
PHGDH-213ENST00000641272 GLRA4Q5JXX5 417 aa18.45■□□□□ 0.54
PHGDH-213ENST00000641272 ASTLQ6HA08 431 aaPredicted RBP18.45■□□□□ 0.54
PHGDH-213ENST00000641272 CCDC113Q9H0I3 377 aa18.45■□□□□ 0.54
PHGDH-213ENST00000641272 C2orf40Q9H1Z8 148 aa18.45■□□□□ 0.54
PHGDH-213ENST00000641272 FZD8Q9H461 694 aa18.45■□□□□ 0.54
PHGDH-213ENST00000641272 WDR6Q9NNW5 1121 aaKnown RBP18.45■□□□□ 0.54
PHGDH-213ENST00000641272 LIMCH1Q9UPQ0 1083 aa18.45■□□□□ 0.54
PHGDH-213ENST00000641272 DOCK6Q96HP0 2047 aa18.44■□□□□ 0.54
PHGDH-213ENST00000641272 CFHP08603 1231 aa18.44■□□□□ 0.54
PHGDH-213ENST00000641272 RPA1P27694 616 aa18.44■□□□□ 0.54
PHGDH-213ENST00000641272 MAPK6Q16659 721 aa18.44■□□□□ 0.54
PHGDH-213ENST00000641272 HAUS3Q68CZ6 603 aa18.44■□□□□ 0.54
PHGDH-213ENST00000641272 CEP57Q86XR8 500 aa18.44■□□□□ 0.54
PHGDH-213ENST00000641272 SIX5Q8N196 739 aa18.44■□□□□ 0.54
PHGDH-213ENST00000641272 CYP11B2P19099 503 aa18.43■□□□□ 0.54
PHGDH-213ENST00000641272 NAMPTP43490 491 aa18.43■□□□□ 0.54
PHGDH-213ENST00000641272 FAM187BQ17R55 369 aa18.43■□□□□ 0.54
PHGDH-213ENST00000641272 FAM171A1Q5VUB5 890 aa18.43■□□□□ 0.54
PHGDH-213ENST00000641272 FAM184AQ8NB25 1140 aa18.43■□□□□ 0.54
PHGDH-213ENST00000641272 STAMQ92783 540 aa18.43■□□□□ 0.54
PHGDH-213ENST00000641272 ADPGKQ9BRR6 497 aa18.43■□□□□ 0.54
PHGDH-213ENST00000641272 BHMT2Q9H2M3 363 aa18.43■□□□□ 0.54
PHGDH-213ENST00000641272 FOXP1Q9H334 677 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-213ENST00000641272 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.43■□□□□ 0.54
PHGDH-213ENST00000641272 DPP7Q9UHL4 492 aa18.43■□□□□ 0.54
PHGDH-213ENST00000641272 PI15O43692 258 aa18.42■□□□□ 0.54
PHGDH-213ENST00000641272 PSMD5Q16401 504 aa18.42■□□□□ 0.54
PHGDH-213ENST00000641272 SNX29Q8TEQ0 813 aa18.42■□□□□ 0.54
PHGDH-213ENST00000641272 NT5C3AQ9H0P0 336 aa18.42■□□□□ 0.54
PHGDH-213ENST00000641272 GOLGA2P5Q9HBQ8 144 aa18.42■□□□□ 0.54
PHGDH-213ENST00000641272 DDX19AQ9NUU7 478 aaKnown RBP18.42■□□□□ 0.54
PHGDH-213ENST00000641272 FNIP2Q9P278 1114 aa18.42■□□□□ 0.54
PHGDH-213ENST00000641272 CA14Q9ULX7 337 aa18.42■□□□□ 0.54
PHGDH-213ENST00000641272 NOL7Q9UMY1 257 aaKnown RBP18.42■□□□□ 0.54
PHGDH-213ENST00000641272 MYH15Q9Y2K3 1946 aa18.42■□□□□ 0.54
PHGDH-213ENST00000641272 COL4A3Q01955 1670 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 USP34Q70CQ2 3546 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 PP2D1A8MPX8 630 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 ACKR2O00590 384 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 ADAM12O43184 909 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 THP07101 528 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 NPR3P17342 541 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 IGFBP6P24592 240 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-213ENST00000641272 NTHL1P78549 312 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 CREMQ03060 361 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 ORC2Q13416 577 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-213ENST00000641272 PPP2R5AQ15172 486 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 NAB2Q15742 525 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 CEP120Q8N960 986 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 FBXO18Q8NFZ0 1043 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 IFT74Q96LB3 600 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 LLPHQ9BRT6 129 aaKnown RBP18.41■□□□□ 0.54
PHGDH-213ENST00000641272 TTPALQ9BTX7 342 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 PRKD2Q9BZL6 878 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 PLEKHA4Q9H4M7 779 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 ZDHHC7Q9NXF8 308 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 IGSF9Q9P2J2 1179 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 LRWD1Q9UFC0 647 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 FBXW11Q9UKB1 542 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 KIAA1024Q9UPX6 916 aa18.41■□□□□ 0.54
PHGDH-213ENST00000641272 ZMYND10O75800 440 aa18.4■□□□□ 0.54
PHGDH-213ENST00000641272 AOC1P19801 751 aa18.4■□□□□ 0.54
PHGDH-213ENST00000641272 RFX1P22670 979 aa18.4■□□□□ 0.54
PHGDH-213ENST00000641272 RBM25P49756 843 aaKnown RBP18.4■□□□□ 0.54
PHGDH-213ENST00000641272 FXR2P51116 673 aaKnown RBP eCLIP18.4■□□□□ 0.544e-8■■■□□ 17.3
PHGDH-213ENST00000641272 HMGN5P82970 282 aaKnown RBP18.4■□□□□ 0.54
PHGDH-213ENST00000641272 NT5DC1Q5TFE4 455 aa18.4■□□□□ 0.54
PHGDH-213ENST00000641272 LIN9Q5TKA1 542 aa18.4■□□□□ 0.54
PHGDH-213ENST00000641272 ATF7IP2Q5U623 682 aa18.4■□□□□ 0.54
PHGDH-213ENST00000641272 LILRA6Q6PI73 481 aa18.4■□□□□ 0.54
PHGDH-213ENST00000641272 PIK3R5Q8WYR1 880 aa18.4■□□□□ 0.54
PHGDH-213ENST00000641272 CLSTN3Q9BQT9 956 aa18.4■□□□□ 0.54
PHGDH-213ENST00000641272 EPS15L1Q9UBC2 864 aa18.4■□□□□ 0.54
PHGDH-213ENST00000641272 PCDHB6Q9Y5E3 794 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms