RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 Q8N9P0 234 aaPredicted RBP4.31□□□□□ -1.72
VPS8-228ENST00000628962 FBXO41Q8TF61 875 aa4.31□□□□□ -1.72
VPS8-228ENST00000628962 TYW1Q9NV66 732 aaKnown RBP4.31□□□□□ -1.72
VPS8-228ENST00000628962 INTS7Q9NVH2 962 aaKnown RBP4.31□□□□□ -1.72
VPS8-228ENST00000628962 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS8-228ENST00000628962 USP36Q9P275 1121 aaKnown RBP4.31□□□□□ -1.72
VPS8-228ENST00000628962 CHPF2Q9P2E5 772 aa4.31□□□□□ -1.72
VPS8-228ENST00000628962 G3BP2Q9UN86 482 aaKnown RBP4.31□□□□□ -1.72
VPS8-228ENST00000628962 PDGFRBP09619 1106 aa4.3□□□□□ -1.72
VPS8-228ENST00000628962 SPATA31D3P0C874 917 aa4.3□□□□□ -1.72
VPS8-228ENST00000628962 SIM1P81133 766 aaPredicted RBP4.3□□□□□ -1.72
VPS8-228ENST00000628962 DUSP2Q05923 314 aa4.3□□□□□ -1.72
VPS8-228ENST00000628962 DDB1Q16531 1140 aa4.3□□□□□ -1.72
VPS8-228ENST00000628962 CT47A1Q5JQC4 288 aaPredicted RBP4.3□□□□□ -1.72
VPS8-228ENST00000628962 FAM102AQ5T9C2 384 aaPredicted RBP4.3□□□□□ -1.72
VPS8-228ENST00000628962 SPATA31D4Q6ZUB0 917 aa4.3□□□□□ -1.72
VPS8-228ENST00000628962 SLC44A3Q8N4M1 653 aa4.3□□□□□ -1.72
VPS8-228ENST00000628962 OR10H5Q8NGA6 315 aa4.3□□□□□ -1.72
VPS8-228ENST00000628962 ZNF384Q8TF68 577 aa4.3□□□□□ -1.72
VPS8-228ENST00000628962 POFUT1Q9H488 388 aa4.3□□□□□ -1.72
VPS8-228ENST00000628962 SPON1Q9HCB6 807 aa4.3□□□□□ -1.72
VPS8-228ENST00000628962 NCOA5Q9HCD5 579 aaKnown RBP4.3□□□□□ -1.72
VPS8-228ENST00000628962 SAMD15Q9P1V8 674 aa4.3□□□□□ -1.72
VPS8-228ENST00000628962 MAP3K2Q9Y2U5 619 aa4.3□□□□□ -1.72
VPS8-228ENST00000628962 MYPNQ86TC9 1320 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 CGB1A6NKQ9 187 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 PLD2O14939 933 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 SEC24DO94855 1032 aaPredicted RBP4.29□□□□□ -1.72
VPS8-228ENST00000628962 APOL3O95236 402 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 VIL1P09327 827 aaKnown RBP4.29□□□□□ -1.72
VPS8-228ENST00000628962 ITGAMP11215 1152 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 SLC9A1P19634 815 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 ABCG1P45844 678 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 RARRES1P49788 294 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 RESTQ13127 1097 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 ZNF169Q14929 603 aaPredicted RBP4.29□□□□□ -1.72
VPS8-228ENST00000628962 C21orf62-AS1Q17RA5 79 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 DALRD3Q5D0E6 543 aaKnown RBP4.29□□□□□ -1.72
VPS8-228ENST00000628962 ODR4Q5SWX8 454 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 CREB3L3Q68CJ9 461 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 MSL3Q8N5Y2 521 aaKnown RBP4.29□□□□□ -1.72
VPS8-228ENST00000628962 CHAC2Q8WUX2 184 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 STAG1Q8WVM7 1258 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 JDP2Q8WYK2 163 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 MFSD3Q96ES6 412 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 CCDC136Q96JN2 1154 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 ELF4Q99607 663 aaPredicted RBP4.29□□□□□ -1.72
VPS8-228ENST00000628962 SLC29A3Q9BZD2 475 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 HOMER2Q9NSB8 354 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 FPGT-TNNI3KV9GXZ4 949 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 ARAP1Q96P48 1450 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 LMTK3Q96Q04 1460 aa4.29□□□□□ -1.72
VPS8-228ENST00000628962 SMARCA2P51531 1590 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 TTBK1Q5TCY1 1321 aaPredicted RBP4.28□□□□□ -1.72
VPS8-228ENST00000628962 LRRC3CA6NJW4 275 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 MGST3O14880 152 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 RBP3P10745 1247 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 MYCLP1P12525 358 aaPredicted RBP4.28□□□□□ -1.72
VPS8-228ENST00000628962 MGAT1P26572 445 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 IGFALSP35858 605 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 ANKS6Q68DC2 871 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 ARMC6Q6NXE6 501 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 KRT26Q7Z3Y9 468 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 DHX37Q8IY37 1157 aaKnown RBP4.28□□□□□ -1.72
VPS8-228ENST00000628962 NIM1KQ8IY84 436 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 SH2D3CQ8N5H7 860 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 ZNF366Q8N895 744 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 RTF1Q92541 710 aaKnown RBP4.28□□□□□ -1.72
VPS8-228ENST00000628962 NEU1Q99519 415 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 FDXACB1Q9BRP7 624 aaPredicted RBP4.28□□□□□ -1.72
VPS8-228ENST00000628962 RNF181Q9P0P0 153 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 B4GALT6Q9UBX8 382 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 PCDHB6Q9Y5E3 794 aa4.28□□□□□ -1.72
VPS8-228ENST00000628962 ELL2O00472 640 aaPredicted RBP4.27□□□□□ -1.73
VPS8-228ENST00000628962 PROP1O75360 226 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 CDKL5O76039 1030 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 PCDH8O95206 1070 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 ASLP04424 464 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 FDXRP22570 491 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 SOX5P35711 763 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 ZNF81P51508 661 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 APBA1Q02410 837 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 GPR149Q86SP6 731 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 ARHGEF25Q86VW2 580 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 CDYL2Q8N8U2 506 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 NINJ1Q92982 152 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 ZNF778Q96MU6 729 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 CLUHP3Q96NS8 147 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 KIAA1586Q9HCI6 787 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 CABP5Q9NP86 173 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 MCM8Q9UJA3 840 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 ATP8A1Q9Y2Q0 1164 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 USP15Q9Y4E8 981 aaPredicted RBP4.27□□□□□ -1.73
VPS8-228ENST00000628962 SPO11Q9Y5K1 396 aa4.27□□□□□ -1.73
VPS8-228ENST00000628962 A0A1W2PR48 441 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 TBKBP1A7MCY6 615 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 B5MCH6 92 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 CBX4O00257 560 aa4.26□□□□□ -1.73
VPS8-228ENST00000628962 FOSP01100 380 aaPredicted RBP4.26□□□□□ -1.73
VPS8-228ENST00000628962 CFIP05156 583 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms