RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 TGS1Q96RS0 853 aaKnown RBP20.63■□□□□ 0.89
CCDC9-205ENST00000600117 HAPLN2Q9GZV7 340 aa20.63■□□□□ 0.89
CCDC9-205ENST00000600117 TISP43B9A030 160 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 HNRNPDLO14979 420 aaKnown RBP20.62■□□□□ 0.89
CCDC9-205ENST00000600117 TOM1L1O75674 476 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 GJB5O95377 273 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 LIG4P49917 911 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 COBLL1Q53SF7 1204 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 PTCRAQ6ISU1 281 aaPredicted RBP20.62■□□□□ 0.89
CCDC9-205ENST00000600117 CAVIN1Q6NZI2 390 aaKnown RBP20.62■□□□□ 0.89
CCDC9-205ENST00000600117 SLC27A1Q6PCB7 646 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 TMCO2Q7Z6W1 182 aaPredicted RBP20.62■□□□□ 0.89
CCDC9-205ENST00000600117 NELFCDQ8IXH7 590 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 MYOCDQ8IZQ8 938 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 GUF1Q8N442 669 aaKnown RBP20.62■□□□□ 0.89
CCDC9-205ENST00000600117 BICD1Q96G01 975 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 CDT1Q9H211 546 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 TMEM206Q9H813 350 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 FAM105AQ9NUU6 356 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 MTUS1Q9ULD2 1270 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 EXOC7Q9UPT5 735 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 STYXL1Q9Y6J8 313 aa20.62■□□□□ 0.89
CCDC9-205ENST00000600117 A0A0U1RQF3 1178 aa20.61■□□□□ 0.89
CCDC9-205ENST00000600117 TGFB1I1O43294 461 aa20.61■□□□□ 0.89
CCDC9-205ENST00000600117 NPTXRO95502 500 aa20.61■□□□□ 0.89
CCDC9-205ENST00000600117 IL9P15248 144 aa20.61■□□□□ 0.89
CCDC9-205ENST00000600117 ATF7P17544 494 aaPredicted RBP20.61■□□□□ 0.89
CCDC9-205ENST00000600117 TMEM132AQ24JP5 1023 aa20.61■□□□□ 0.89
CCDC9-205ENST00000600117 MPZL3Q6UWV2 235 aa20.61■□□□□ 0.89
CCDC9-205ENST00000600117 ZNF598Q86UK7 904 aaKnown RBP20.61■□□□□ 0.89
CCDC9-205ENST00000600117 ECHDC2Q86YB7 292 aa20.61■□□□□ 0.89
CCDC9-205ENST00000600117 TRIML1Q8N9V2 468 aa20.61■□□□□ 0.89
CCDC9-205ENST00000600117 SMG8Q8ND04 991 aaKnown RBP20.61■□□□□ 0.89
CCDC9-205ENST00000600117 GTPBP4Q9BZE4 634 aaKnown RBP20.61■□□□□ 0.89
CCDC9-205ENST00000600117 LINC01553A4QN01 128 aa20.6■□□□□ 0.89
CCDC9-205ENST00000600117 GRXCR2A6NFK2 248 aa20.6■□□□□ 0.89
CCDC9-205ENST00000600117 ZNF623O75123 536 aa20.6■□□□□ 0.89
CCDC9-205ENST00000600117 ADSSP30520 456 aa20.6■□□□□ 0.89
CCDC9-205ENST00000600117 PRCPP42785 496 aa20.6■□□□□ 0.89
CCDC9-205ENST00000600117 RAB27AP51159 221 aa20.6■□□□□ 0.89
CCDC9-205ENST00000600117 MCL1Q07820 350 aa20.6■□□□□ 0.89
CCDC9-205ENST00000600117 KNOP1Q1ED39 458 aaKnown RBP20.6■□□□□ 0.89
CCDC9-205ENST00000600117 SKOR2Q2VWA4 1001 aaPredicted RBP20.6■□□□□ 0.89
CCDC9-205ENST00000600117 PUS10Q3MIT2 529 aaKnown RBP20.6■□□□□ 0.89
CCDC9-205ENST00000600117 ZNF568Q3ZCX4 644 aa20.6■□□□□ 0.89
CCDC9-205ENST00000600117 MRPL10Q7Z7H8 261 aaKnown RBP20.6■□□□□ 0.89
CCDC9-205ENST00000600117 SYCP3Q8IZU3 236 aa20.6■□□□□ 0.89
CCDC9-205ENST00000600117 GBP3Q9H0R5 595 aa20.6■□□□□ 0.89
CCDC9-205ENST00000600117 KCTD10Q9H3F6 313 aa20.6■□□□□ 0.89
CCDC9-205ENST00000600117 MAPK8IP1Q9UQF2 711 aa20.6■□□□□ 0.89
CCDC9-205ENST00000600117 PCDHB2Q9Y5E7 798 aa20.6■□□□□ 0.89
CCDC9-205ENST00000600117 CFAP54Q96N23 3096 aa20.6■□□□□ 0.89
CCDC9-205ENST00000600117 A0A0B4J269 797 aa20.59■□□□□ 0.89
CCDC9-205ENST00000600117 DCXO43602 365 aa20.59■□□□□ 0.89
CCDC9-205ENST00000600117 AMHP03971 560 aa20.59■□□□□ 0.89
CCDC9-205ENST00000600117 MCF2P10911 925 aa20.59■□□□□ 0.89
CCDC9-205ENST00000600117 CD44P16070 742 aaKnown RBP20.59■□□□□ 0.89
CCDC9-205ENST00000600117 DCAF4L1Q3SXM0 396 aa20.59■□□□□ 0.89
CCDC9-205ENST00000600117 ZBTB33Q86T24 672 aa20.59■□□□□ 0.89
CCDC9-205ENST00000600117 ADPGKQ9BRR6 497 aa20.59■□□□□ 0.89
CCDC9-205ENST00000600117 ELAC1Q9H777 363 aaKnown RBP20.59■□□□□ 0.89
CCDC9-205ENST00000600117 ANKFY1Q9P2R3 1169 aa20.59■□□□□ 0.89
CCDC9-205ENST00000600117 IPPQ9Y573 584 aa20.59■□□□□ 0.89
CCDC9-205ENST00000600117 PPP1R3GB7ZBB8 358 aa20.58■□□□□ 0.89
CCDC9-205ENST00000600117 CLDN3O15551 220 aa20.58■□□□□ 0.89
CCDC9-205ENST00000600117 SKIP12755 728 aa20.58■□□□□ 0.89
CCDC9-205ENST00000600117 NOLC1Q14978 699 aaKnown RBP eCLIP20.58■□□□□ 0.89
CCDC9-205ENST00000600117 NPAS4Q8IUM7 802 aa20.58■□□□□ 0.89
CCDC9-205ENST00000600117 ADSSL1Q8N142 457 aa20.58■□□□□ 0.89
CCDC9-205ENST00000600117 CEP120Q8N960 986 aa20.58■□□□□ 0.89
CCDC9-205ENST00000600117 TOP1MTQ969P6 601 aa20.58■□□□□ 0.89
CCDC9-205ENST00000600117 SYAP1Q96A49 352 aaPredicted RBP20.58■□□□□ 0.89
CCDC9-205ENST00000600117 SNX27Q96L92 541 aa20.58■□□□□ 0.89
CCDC9-205ENST00000600117 FBXL18Q96ME1 805 aa20.58■□□□□ 0.89
CCDC9-205ENST00000600117 TCHPQ9BT92 498 aa20.58■□□□□ 0.89
CCDC9-205ENST00000600117 NXF3Q9H4D5 531 aaKnown RBP20.58■□□□□ 0.89
CCDC9-205ENST00000600117 AGPAT3Q9NRZ7 376 aa20.58■□□□□ 0.89
CCDC9-205ENST00000600117 RNF19AQ9NV58 838 aa20.58■□□□□ 0.89
CCDC9-205ENST00000600117 TMEM161AQ9NX61 479 aa20.58■□□□□ 0.89
CCDC9-205ENST00000600117 HES2Q9Y543 173 aa20.58■□□□□ 0.89
CCDC9-205ENST00000600117 COL4A6Q14031 1691 aa20.58■□□□□ 0.88
CCDC9-205ENST00000600117 MYO7AQ13402 2215 aa20.57■□□□□ 0.88
CCDC9-205ENST00000600117 MEIS3P2A8K0S8 358 aa20.57■□□□□ 0.88
CCDC9-205ENST00000600117 FAM189A1O60320 539 aa20.57■□□□□ 0.88
CCDC9-205ENST00000600117 KIF20AO95235 890 aa20.57■□□□□ 0.88
CCDC9-205ENST00000600117 EOMESO95936 686 aa20.57■□□□□ 0.88
CCDC9-205ENST00000600117 SLFN12LQ6IEE8 588 aa20.57■□□□□ 0.88
CCDC9-205ENST00000600117 APBB1IPQ7Z5R6 666 aaPredicted RBP20.57■□□□□ 0.88
CCDC9-205ENST00000600117 CBWD1Q9BRT8 395 aa20.57■□□□□ 0.88
CCDC9-205ENST00000600117 TRIM6Q9C030 488 aaPredicted RBP20.57■□□□□ 0.88
CCDC9-205ENST00000600117 RNF39Q9H2S5 420 aa20.57■□□□□ 0.88
CCDC9-205ENST00000600117 TYW1Q9NV66 732 aaKnown RBP20.57■□□□□ 0.88
CCDC9-205ENST00000600117 PDXKO00764 312 aa20.56■□□□□ 0.88
CCDC9-205ENST00000600117 HARSP12081 509 aaKnown RBP20.56■□□□□ 0.88
CCDC9-205ENST00000600117 IBSPP21815 317 aaPredicted RBP20.56■□□□□ 0.88
CCDC9-205ENST00000600117 GARTP22102 1010 aa20.56■□□□□ 0.88
CCDC9-205ENST00000600117 GRM5P41594 1212 aa20.56■□□□□ 0.88
CCDC9-205ENST00000600117 SNRPFP62306 86 aaKnown RBP20.56■□□□□ 0.88
CCDC9-205ENST00000600117 ZCWPW2Q504Y3 356 aa20.56■□□□□ 0.88
CCDC9-205ENST00000600117 AGMOQ6ZNB7 445 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms