RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CNPP09543 421 aaKnown RBP11.56□□□□□ -0.56
CCDC9-203ENST00000596938 SCP2P22307 547 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 KLRC2P26717 231 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 CA8P35219 290 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 RESTQ13127 1097 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 NAB2Q15742 525 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 CES5AQ6NT32 575 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 TAS1R3Q7RTX0 852 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 TMEM161BQ8NDZ6 487 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 HERC2P3Q9BVR0 1158 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 CCSER1Q9C0I3 900 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 ZSCAN16Q9H4T2 348 aaPredicted RBP11.56□□□□□ -0.56
CCDC9-203ENST00000596938 LARSQ9P2J5 1176 aaKnown RBP11.56□□□□□ -0.56
CCDC9-203ENST00000596938 ODF2LQ9ULJ1 636 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 MTMR6Q9Y217 621 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 CLIC4Q9Y696 253 aa11.56□□□□□ -0.56
CCDC9-203ENST00000596938 MORC2Q9Y6X9 1032 aaPredicted RBP11.56□□□□□ -0.56
CCDC9-203ENST00000596938 PLXNA4Q9HCM2 1894 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 H0YCG3 227 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 SLC16A4O15374 487 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 DCXO43602 365 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 TADA2AO75478 443 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 URODP06132 367 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 MAPTP10636 758 aaKnown RBP11.55□□□□□ -0.56
CCDC9-203ENST00000596938 MCF2P10911 925 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 PDIA4P13667 645 aaKnown RBP11.55□□□□□ -0.56
CCDC9-203ENST00000596938 EPCAMP16422 314 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 PROZP22891 400 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 DDIT3P35638 169 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 GRM5P41594 1212 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 GLUD2P49448 558 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 CLCN4P51793 760 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 DSG1Q02413 1049 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 GRIN1Q05586 938 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 STRN3Q13033 797 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 HSP90AA2PQ14568 343 aaPredicted RBP11.55□□□□□ -0.56
CCDC9-203ENST00000596938 USP41Q3LFD5 358 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 XKR4Q5GH76 650 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 TMEM31Q5JXX7 168 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 FUT10Q6P4F1 479 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 ALKAL1Q6UXT8 129 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 RNF135Q8IUD6 432 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 NECTIN4Q96NY8 510 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 TARS2Q9BW92 718 aaKnown RBP11.55□□□□□ -0.56
CCDC9-203ENST00000596938 GPR62Q9BZJ7 368 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 CDT1Q9H211 546 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 BLOC1S4Q9NUP1 217 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 ADAM28Q9UKQ2 775 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 GDAQ9Y2T3 454 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 SRPRBQ9Y5M8 271 aaKnown RBP11.55□□□□□ -0.56
CCDC9-203ENST00000596938 ARID2Q68CP9 1835 aa11.55□□□□□ -0.56
CCDC9-203ENST00000596938 NPHP3-ACAD11A0A0J9YXS1 232 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 F8W810 466 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 C2CD2LO14523 706 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 ABLIM1O14639 778 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 TEX28O15482 410 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 STX6O43752 255 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 TOM1L1O75674 476 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 ADH1AP07327 375 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 PLCG1P19174 1290 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 MTHFRP42898 656 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 ZNF131P52739 623 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 YARSP54577 528 aaKnown RBP11.54□□□□□ -0.56
CCDC9-203ENST00000596938 RAD51AP2Q09MP3 1159 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 KARSQ15046 597 aaKnown RBP11.54□□□□□ -0.56
CCDC9-203ENST00000596938 HERC4Q5GLZ8 1057 aaPredicted RBP11.54□□□□□ -0.56
CCDC9-203ENST00000596938 ATAT1Q5SQI0 421 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 KIAA1841Q6NSI8 718 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 FAM173BQ6P4H8 233 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 MPZL3Q6UWV2 235 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 ZPBP2Q6X784 338 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 LRRC15Q8TF66 581 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 HDAC7Q8WUI4 952 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 RAD54LQ92698 747 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 FBXL18Q96ME1 805 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 RIPOR3Q96MK2 946 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 PPP1R10Q96QC0 940 aaKnown RBP11.54□□□□□ -0.56
CCDC9-203ENST00000596938 PAAF1Q9BRP4 392 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 TCHPQ9BT92 498 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 LRFN3Q9BTN0 628 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 CCDC94Q9BW85 323 aaPredicted RBP11.54□□□□□ -0.56
CCDC9-203ENST00000596938 CXCL16Q9H2A7 254 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 C11orf16Q9NQ32 467 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCDC9-203ENST00000596938 TOPORSQ9NS56 1045 aaPredicted RBP11.54□□□□□ -0.56
CCDC9-203ENST00000596938 FNIP2Q9P278 1114 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 DPP7Q9UHL4 492 aa11.54□□□□□ -0.56
CCDC9-203ENST00000596938 FBXO2Q9UK22 296 aaPredicted RBP11.54□□□□□ -0.56
CCDC9-203ENST00000596938 SMIM28A0A1B0GU29 152 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 MARCKSP29966 332 aaPredicted RBP11.53□□□□□ -0.56
CCDC9-203ENST00000596938 NCKAP1LP55160 1127 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 CREMQ03060 361 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 ELAVL2Q12926 359 aaKnown RBP11.53□□□□□ -0.56
CCDC9-203ENST00000596938 MCM6Q14566 821 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 SLC39A14Q15043 492 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 ZNF568Q3ZCX4 644 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 DCLRE1AQ6PJP8 1040 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 HAUS6Q7Z4H7 955 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 GPBP1Q86WP2 473 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 C12orf76Q8N812 135 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms