RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 RFPL2O75678 378 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 STBD1O95210 358 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 ITGA4P13612 1032 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 FGFR4P22455 802 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 HOXA11P31270 313 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-215ENST00000592911 CNR2P34972 360 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 MLLT6P55198 1093 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-215ENST00000592911 PSMC5P62195 406 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 ELAVL2Q12926 359 aaKnown RBP9.72□□□□□ -0.85
SMAD4-215ENST00000592911 SLC44A4Q53GD3 710 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 CREB3L3Q68CJ9 461 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 NOTUMQ6P988 496 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 ZNF852Q6ZMS4 543 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 GET4Q7L5D6 327 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-215ENST00000592911 MIER3Q7Z3K6 550 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 DCLK2Q8N568 766 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 MSANTD3Q96H12 275 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 EPAS1Q99814 870 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 NFKBIZQ9BYH8 718 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 FOXQ1Q9C009 403 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 DHX33Q9H6R0 707 aaKnown RBP9.72□□□□□ -0.85
SMAD4-215ENST00000592911 TRPV5Q9NQA5 729 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 GDE1Q9NZC3 331 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 RAB23Q9ULC3 237 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 SF3B1O75533 1304 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMAD4-215ENST00000592911 ARID2Q68CP9 1835 aa9.72□□□□□ -0.85
SMAD4-215ENST00000592911 ARL5CA6NH57 179 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 POTEMA6NI47 508 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 FAM170BA6NMN3 283 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 GOLGA8AA7E2F4 631 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 MEIS3P2A8K0S8 358 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 GOLGA8BA8MQT2 603 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 B4GALT3O60512 393 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 MICAL2O94851 1124 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 ERLIN2O94905 339 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 SSBP05455 408 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMAD4-215ENST00000592911 RETP07949 1114 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 TGM1P22735 817 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 OR1G1P47890 313 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 GPC5P78333 572 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 EXOSC10Q01780 885 aaKnown RBP9.71□□□□□ -0.86
SMAD4-215ENST00000592911 ADCY1Q08828 1119 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 GRIK3Q13003 919 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 DRP2Q13474 957 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 MXD4Q14582 209 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-215ENST00000592911 UGCGQ16739 394 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 MTERF2Q49AM1 385 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 UBXN11Q5T124 520 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 LIN9Q5TKA1 542 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 SMYD5Q6GMV2 418 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 GALNT17Q6IS24 598 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 FUT10Q6P4F1 479 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 POTEGQ6S5H5 508 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 ZDHHC16Q969W1 377 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 CCDC136Q96JN2 1154 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 NLRP4Q96MN2 994 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 RNF26Q9BY78 433 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-215ENST00000592911 ADAM33Q9BZ11 813 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 UNC45AQ9H3U1 944 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 FAM217BQ9NTX9 383 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-215ENST00000592911 ADAM28Q9UKQ2 775 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 ZFHX4Q86UP3 3567 aa9.71□□□□□ -0.86
SMAD4-215ENST00000592911 VWA8A3KMH1 1905 aa9.7□□□□□ -0.86
SMAD4-215ENST00000592911 FASNP49327 2511 aaKnown RBP9.7□□□□□ -0.86
SMAD4-215ENST00000592911 C2CD2LO14523 706 aa9.7□□□□□ -0.86
SMAD4-215ENST00000592911 CSDE1O75534 798 aaKnown RBP9.7□□□□□ -0.86
SMAD4-215ENST00000592911 PAPSS2O95340 614 aaPredicted RBP9.7□□□□□ -0.86
SMAD4-215ENST00000592911 POMCP01189 267 aa9.7□□□□□ -0.86
SMAD4-215ENST00000592911 QARSP47897 775 aaKnown RBP9.7□□□□□ -0.86
SMAD4-215ENST00000592911 LIMK1P53667 647 aa9.7□□□□□ -0.86
SMAD4-215ENST00000592911 SHC2P98077 582 aa9.7□□□□□ -0.86
SMAD4-215ENST00000592911 AKAP17AQ02040 695 aaKnown RBP9.7□□□□□ -0.86
SMAD4-215ENST00000592911 CSTF1Q05048 431 aaKnown RBP9.7□□□□□ -0.86
SMAD4-215ENST00000592911 PPP2R5CQ13362 524 aa9.7□□□□□ -0.86
SMAD4-215ENST00000592911 TRMT1LQ7Z2T5 733 aaKnown RBP9.7□□□□□ -0.86
SMAD4-215ENST00000592911 PIK3R5Q8WYR1 880 aa9.7□□□□□ -0.86
SMAD4-215ENST00000592911 FGF13Q92913 245 aa9.7□□□□□ -0.86
SMAD4-215ENST00000592911 FGF14Q92915 247 aa9.7□□□□□ -0.86
SMAD4-215ENST00000592911 PHF20Q9BVI0 1012 aa9.7□□□□□ -0.86
SMAD4-215ENST00000592911 CSRNP2Q9H175 543 aa9.7□□□□□ -0.86
SMAD4-215ENST00000592911 CHRDQ9H2X0 955 aa9.7□□□□□ -0.86
SMAD4-215ENST00000592911 PRG3Q9Y2Y8 225 aaPredicted RBP9.7□□□□□ -0.86
SMAD4-215ENST00000592911 IPPQ9Y573 584 aa9.7□□□□□ -0.86
SMAD4-215ENST00000592911 TDGF1P13385 188 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 CCR3P51677 355 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 PTENP60484 403 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 SNW1Q13573 536 aaKnown RBP9.69□□□□□ -0.86
SMAD4-215ENST00000592911 TFDP1Q14186 410 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 UBXN2BQ14CS0 331 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 CSRP2Q16527 193 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 PPM1LQ5SGD2 360 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 PARM1Q6UWI2 310 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 ANO5Q75V66 913 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 OTUD6AQ7L8S5 288 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 FERMT3Q86UX7 667 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 C4orf19Q8IY42 314 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 SMG8Q8ND04 991 aaKnown RBP9.69□□□□□ -0.86
SMAD4-215ENST00000592911 ETNPPLQ8TBG4 499 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 FEZF2Q8TBJ5 459 aa9.69□□□□□ -0.86
SMAD4-215ENST00000592911 ELSPBP1Q96BH3 223 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms