RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 FAM213AQ9BRX8 229 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 SRRTQ9BXP5 876 aaKnown RBP11.62□□□□□ -0.55
SMAD4-214ENST00000592186 PCIF1Q9H4Z3 704 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 METTL14Q9HCE5 456 aaKnown RBP11.62□□□□□ -0.55
SMAD4-214ENST00000592186 TMEM161AQ9NX61 479 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 IPPQ9Y573 584 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 PCDHB7Q9Y5E2 793 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.62□□□□□ -0.55
SMAD4-214ENST00000592186 MYH11P35749 1972 aa11.62□□□□□ -0.55
SMAD4-214ENST00000592186 TRIM49BA6NDI0 452 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 SPDYE4A6NLX3 237 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 TISP43B9A030 160 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 MGEA5O60502 916 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 IL18RAPO95256 599 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 EPB41P11171 864 aaKnown RBP11.61□□□□□ -0.55
SMAD4-214ENST00000592186 ITGA4P13612 1032 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 CYP2J2P51589 502 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 SNRNP35Q16560 246 aaKnown RBP11.61□□□□□ -0.55
SMAD4-214ENST00000592186 CEP135Q66GS9 1140 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 C11orf57Q6ZUT1 292 aaPredicted RBP11.61□□□□□ -0.55
SMAD4-214ENST00000592186 INTS8Q75QN2 995 aaKnown RBP11.61□□□□□ -0.55
SMAD4-214ENST00000592186 FRMD5Q7Z6J6 570 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 CDR2LQ86X02 465 aaPredicted RBP11.61□□□□□ -0.55
SMAD4-214ENST00000592186 FAM200AQ8TCP9 573 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 VWCEQ96DN2 955 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 EIF2AQ9BY44 585 aaKnown RBP11.61□□□□□ -0.55
SMAD4-214ENST00000592186 HAPLN2Q9GZV7 340 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 IKZF4Q9H2S9 585 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 ASB7Q9H672 318 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 RPF1Q9H9Y2 349 aaKnown RBP11.61□□□□□ -0.55
SMAD4-214ENST00000592186 MAGEC2Q9UBF1 373 aaPredicted RBP11.61□□□□□ -0.55
SMAD4-214ENST00000592186 CPSF3Q9UKF6 684 aaKnown RBP11.61□□□□□ -0.55
SMAD4-214ENST00000592186 LRFN2Q9ULH4 789 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 GIT1Q9Y2X7 761 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 NFE2L3Q9Y4A8 694 aa11.61□□□□□ -0.55
SMAD4-214ENST00000592186 MKI67P46013 3256 aaKnown RBP11.61□□□□□ -0.55
SMAD4-214ENST00000592186 GOLGA6L19H0YKK7 550 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 FAM189A1O60320 539 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 ACRP10323 421 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 HARSP12081 509 aaKnown RBP11.6□□□□□ -0.55
SMAD4-214ENST00000592186 KRT13P13646 458 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 KCNJ6P48051 423 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 ACOT2P49753 483 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 LRRC55Q6ZSA7 311 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 ZNF365Q70YC5 407 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 C16orf59Q7L2K0 433 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 NPAS4Q8IUM7 802 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 FAM186BQ8IYM0 893 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 SMG8Q8ND04 991 aaKnown RBP11.6□□□□□ -0.55
SMAD4-214ENST00000592186 ANKRD20A12PQ8NF67 263 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 SPDYE1Q8NFV5 336 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-214ENST00000592186 PHOSPHO2Q8TCD6 241 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 HERVK_113Q902F9 699 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 MFSD14AQ96MC6 490 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 MED15Q96RN5 788 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 KANSL3Q9P2N6 904 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 ARMCX3Q9UH62 379 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-214ENST00000592186 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-214ENST00000592186 STX10O60499 249 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 AKAP3O75969 853 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 ADRB2P07550 413 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 CDK11BP21127 795 aaKnown RBP11.6□□□□□ -0.55
SMAD4-214ENST00000592186 EEF1GP26641 437 aaKnown RBP11.6□□□□□ -0.55
SMAD4-214ENST00000592186 AP3M2P53677 418 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 MARSP56192 900 aaKnown RBP11.6□□□□□ -0.55
SMAD4-214ENST00000592186 MCCD1P59942 119 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-214ENST00000592186 OSTNP61366 133 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 PPP2R3AQ06190 1150 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 SPAG1Q07617 926 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 IQCB1Q15051 598 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 TMEM240Q5SV17 173 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 GLB1LQ6UWU2 654 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 CRELD2Q6UXH1 353 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-214ENST00000592186 OTOP2Q7RTS6 562 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 ZNF598Q86UK7 904 aaKnown RBP11.6□□□□□ -0.55
SMAD4-214ENST00000592186 NT5DC4Q86YG4 428 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 RDH13Q8NBN7 331 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 TMC2Q8TDI7 906 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 CACTINQ8WUQ7 758 aaKnown RBP11.6□□□□□ -0.55
SMAD4-214ENST00000592186 LINC01599Q8WXQ3 324 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 TOP1MTQ969P6 601 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 SAAL1Q96ER3 474 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 NXF3Q9H4D5 531 aaKnown RBP11.6□□□□□ -0.55
SMAD4-214ENST00000592186 CBX8Q9HC52 389 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 FANCLQ9NW38 375 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 SNTG2Q9NY99 539 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 RBAKQ9NYW8 714 aaPredicted RBP11.6□□□□□ -0.55
SMAD4-214ENST00000592186 PARP2Q9UGN5 583 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 DERAQ9Y315 318 aa11.6□□□□□ -0.55
SMAD4-214ENST00000592186 TTC26A0AVF1 554 aa11.59□□□□□ -0.55
SMAD4-214ENST00000592186 GOLGA8IPA6NC78 632 aa11.59□□□□□ -0.55
SMAD4-214ENST00000592186 GOLGA8JA6NMD2 632 aa11.59□□□□□ -0.55
SMAD4-214ENST00000592186 XPOTO43592 962 aaKnown RBP11.59□□□□□ -0.55
SMAD4-214ENST00000592186 TPM2P07951 284 aa11.59□□□□□ -0.55
SMAD4-214ENST00000592186 KCNE1P15382 129 aa11.59□□□□□ -0.55
SMAD4-214ENST00000592186 MAGEA10P43363 369 aaPredicted RBP11.59□□□□□ -0.55
SMAD4-214ENST00000592186 WDR5P61964 334 aaKnown RBP11.59□□□□□ -0.55
SMAD4-214ENST00000592186 MLLT1Q03111 559 aaPredicted RBP11.59□□□□□ -0.55
SMAD4-214ENST00000592186 CYP24A1Q07973 514 aa11.59□□□□□ -0.55
SMAD4-214ENST00000592186 PSMD6Q15008 389 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms