RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 RDH13Q8NBN7 331 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 HELQQ8TDG4 1101 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 EPS8L3Q8TE67 593 aaKnown RBP13.27□□□□□ -0.29
PDE4A-207ENST00000590407 GRK7Q8WTQ7 553 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 DDX1Q92499 740 aaKnown RBP13.27□□□□□ -0.29
PDE4A-207ENST00000590407 KIFAP3Q92845 792 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 CBWD1Q9BRT8 395 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 TMEM8AQ9HCN3 771 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 AAASQ9NRG9 546 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 FEM1BQ9UK73 627 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 EXOC7Q9UPT5 735 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 RGPD3A6NKT7 1758 aaPredicted RBP13.27□□□□□ -0.29
PDE4A-207ENST00000590407 RGPD4Q7Z3J3 1758 aa13.27□□□□□ -0.29
PDE4A-207ENST00000590407 TMEM110-MUSTN1A8MSY1 372 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 ANKRD63C9JTQ0 380 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 O00370 1275 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 DHX15O43143 795 aaKnown RBP13.26□□□□□ -0.29
PDE4A-207ENST00000590407 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 CYP11B1P15538 503 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 FGFR4P22455 802 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 SLC1A1P43005 524 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 MKRN3Q13064 507 aaKnown RBP13.26□□□□□ -0.29
PDE4A-207ENST00000590407 MSL1Q68DK7 614 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 KRT39Q6A163 491 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 HAUS6Q7Z4H7 955 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 SPICE1Q8N0Z3 855 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 SAMD3Q8N6K7 520 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 CCHCR1Q8TD31 782 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 C7orf43Q8WVR3 580 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 ZNF653Q96CK0 615 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 CSRNP1Q96S65 589 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 PRMT1Q99873 361 aaKnown RBP13.26□□□□□ -0.29
PDE4A-207ENST00000590407 LGALS13Q9UHV8 139 aa13.26□□□□□ -0.29
PDE4A-207ENST00000590407 TCRBV7S2A1N4TA0A589 114 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 CYP26A1O43174 497 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 GRIN3BO60391 1043 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 SORBS3O60504 671 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 MYBL1P10243 752 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 ITGB5P18084 799 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 ECE1P42892 770 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 QARSP47897 775 aaKnown RBP13.25□□□□□ -0.29
PDE4A-207ENST00000590407 LMNB2Q03252 620 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 GALNTL6Q49A17 601 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 ZNF746Q6NUN9 644 aaPredicted RBP13.25□□□□□ -0.29
PDE4A-207ENST00000590407 LDHDQ86WU2 507 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 C4orf19Q8IY42 314 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 CCDC63Q8NA47 563 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 KAT5Q92993 513 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 TRIM11Q96F44 468 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 SNF8Q96H20 258 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 FBXL18Q96ME1 805 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 FOXP3Q9BZS1 431 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 CDC42EP4Q9H3Q1 356 aaKnown RBP13.25□□□□□ -0.29
PDE4A-207ENST00000590407 PCIF1Q9H4Z3 704 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 TDRD3Q9H7E2 651 aaKnown RBP13.25□□□□□ -0.29
PDE4A-207ENST00000590407 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.25□□□□□ -0.29
PDE4A-207ENST00000590407 ATP6V0A4Q9HBG4 840 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 MAP3K20Q9NYL2 800 aaKnown RBP13.25□□□□□ -0.29
PDE4A-207ENST00000590407 USP15Q9Y4E8 981 aaPredicted RBP13.25□□□□□ -0.29
PDE4A-207ENST00000590407 UBIAD1Q9Y5Z9 338 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 ACTL7BQ9Y614 415 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 ZHX2Q9Y6X8 837 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 A0A1B0GUA9 196 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 ZC3H11AO75152 810 aaKnown RBP eCLIP13.25□□□□□ -0.299e-6■■■■□ 23.7
PDE4A-207ENST00000590407 TTC4O95801 387 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 ADRB2P07550 413 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 VIMP08670 466 aaKnown RBP13.25□□□□□ -0.29
PDE4A-207ENST00000590407 EZRP15311 586 aaKnown RBP13.25□□□□□ -0.29
PDE4A-207ENST00000590407 IVDP26440 423 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 CENPCQ03188 943 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 PPP1R7Q15435 360 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 CLEC16AQ2KHT3 1053 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 SGO2Q562F6 1265 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 STYK1Q6J9G0 422 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 CCDC174Q6PII3 467 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 CEP128Q6ZU80 1094 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 USP37Q86T82 979 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 SLC47A2Q86VL8 602 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 SEPT12Q8IYM1 358 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 PLCD3Q8N3E9 789 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 ACER1Q8TDN7 264 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 PARD3BQ8TEW8 1205 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 DHX38Q92620 1227 aaKnown RBP13.25□□□□□ -0.29
PDE4A-207ENST00000590407 MFSD14AQ96MC6 490 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 NT5C1BQ96P26 610 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 ELAC2Q9BQ52 826 aaKnown RBP13.25□□□□□ -0.29
PDE4A-207ENST00000590407 CXorf56Q9H5V9 222 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 AGO4Q9HCK5 861 aaKnown RBP13.25□□□□□ -0.29
PDE4A-207ENST00000590407 KCNH7Q9NS40 1196 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 ANKEF1Q9NU02 776 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 ZBTB21Q9ULJ3 1066 aa13.25□□□□□ -0.29
PDE4A-207ENST00000590407 TBC1D12O60347 775 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 SUN1O94901 812 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 GJB6O95452 261 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 ATP6V1G2O95670 118 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 ALADP13716 330 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 GCNT1Q02742 428 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 KRT17Q04695 432 aa13.24□□□□□ -0.29
PDE4A-207ENST00000590407 ZNF268Q14587 947 aaPredicted RBP13.24□□□□□ -0.29
PDE4A-207ENST00000590407 UBAP2Q5T6F2 1119 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms