RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 TELO2Q9Y4R8 837 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 KIAA1217Q5T5P2 1943 aa11.21□□□□□ -0.62
VPS25-203ENST00000589520 ADGRA2Q96PE1 1338 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 LCTP09848 1927 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 SLC15A5A6NIM6 579 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 CCDC85CA6NKD9 419 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 ACKR2O00590 384 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 SORBS3O60504 671 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 PEX10O60683 326 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 ZRANB2O95218 330 aaKnown RBP eCLIP11.2□□□□□ -0.62
VPS25-203ENST00000589520 C4BPAP04003 597 aaKnown RBP11.2□□□□□ -0.62
VPS25-203ENST00000589520 DLATP10515 647 aaKnown RBP11.2□□□□□ -0.62
VPS25-203ENST00000589520 TBXAS1P24557 533 aaPredicted RBP11.2□□□□□ -0.62
VPS25-203ENST00000589520 TMOD1P28289 359 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 ADORA2AP29274 412 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 GALCP54803 685 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 GPC5P78333 572 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 LAMTOR4Q0VGL1 99 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 CAPSQ13938 189 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 GRB14Q14449 540 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 HSDL1Q3SXM5 330 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 ZACNQ401N2 412 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 IQSEC1Q6DN90 963 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 TAPT1Q6NXT6 567 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 CC2D1AQ6P1N0 951 aaPredicted RBP11.2□□□□□ -0.62
VPS25-203ENST00000589520 PLEKHH3Q7Z736 793 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 DPP9Q86TI2 863 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 IFNLR1Q8IU57 520 aaPredicted RBP11.2□□□□□ -0.62
VPS25-203ENST00000589520 GLYCTKQ8IVS8 523 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 FBXO16Q8IX29 292 aaPredicted RBP11.2□□□□□ -0.62
VPS25-203ENST00000589520 PPM1KQ8N3J5 372 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 TPCN2Q8NHX9 752 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 LNX1Q8TBB1 728 aaPredicted RBP11.2□□□□□ -0.62
VPS25-203ENST00000589520 BRI3BPQ8WY22 251 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 FAXDC2Q96IV6 333 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 CGRRF1Q99675 332 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 CCDC113Q9H0I3 377 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 ABHD16BQ9H3Z7 469 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 ANKZF1Q9H8Y5 726 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 ZNF408Q9H9D4 720 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 C1orf112Q9NSG2 853 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 RBAKQ9NYW8 714 aaPredicted RBP11.2□□□□□ -0.62
VPS25-203ENST00000589520 AMFRQ9UKV5 643 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
VPS25-203ENST00000589520 OGTO15294 1046 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 MSCO60682 206 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 SRGAP2O75044 1071 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 KIF4AO95239 1232 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 ZSCAN20P17040 1043 aaPredicted RBP11.19□□□□□ -0.62
VPS25-203ENST00000589520 MATR3P43243 847 aaKnown RBP eCLIP11.19□□□□□ -0.62
VPS25-203ENST00000589520 PDE6CP51160 858 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 INHBEP58166 350 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 CDR2Q01850 454 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 TNFAIP2Q03169 654 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 MCL1Q07820 350 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 ARHGAP1Q07960 439 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 GPS2Q13227 327 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 PPP2R5EQ16537 467 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 FAM187BQ17R55 369 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 TSHZ1Q6ZSZ6 1077 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 PEX26Q7Z412 305 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 GPR142Q7Z601 462 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 WDR49Q8IV35 697 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 ARHGEF19Q8IW93 802 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 BRSK2Q8IWQ3 736 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 LRRC57Q8N9N7 239 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 SPATA4Q8NEY3 305 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 ACTRT1Q8TDG2 376 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 TAS1R2Q8TE23 839 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 SEMA4DQ92854 862 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 TRIM11Q96F44 468 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 ACO2Q99798 780 aaKnown RBP11.19□□□□□ -0.62
VPS25-203ENST00000589520 TARS2Q9BW92 718 aaKnown RBP11.19□□□□□ -0.62
VPS25-203ENST00000589520 PACSIN1Q9BY11 444 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 IMPG2Q9BZV3 1241 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 FZD8Q9H461 694 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 SUGCTQ9HAC7 445 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 PRMT7Q9NVM4 692 aaPredicted RBP11.19□□□□□ -0.62
VPS25-203ENST00000589520 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.19□□□□□ -0.62
VPS25-203ENST00000589520 FAM53CQ9NYF3 392 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 PCDHB2Q9Y5E7 798 aa11.19□□□□□ -0.62
VPS25-203ENST00000589520 MYH9P35579 1960 aaKnown RBP11.18□□□□□ -0.62
VPS25-203ENST00000589520 MANSC4A6NHS7 340 aaPredicted RBP11.18□□□□□ -0.62
VPS25-203ENST00000589520 TULP1O00294 542 aaPredicted RBP11.18□□□□□ -0.62
VPS25-203ENST00000589520 LRRN2O75325 713 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 MTA2O94776 668 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 CELF2O95319 508 aaKnown RBP11.18□□□□□ -0.62
VPS25-203ENST00000589520 PRKCBP05771 671 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 MYBL1P10243 752 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 HOXD8P13378 290 aaPredicted RBP11.18□□□□□ -0.62
VPS25-203ENST00000589520 CYP11B1P15538 503 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 PHKA2P46019 1235 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 NLRP11P59045 1033 aaKnown RBP11.18□□□□□ -0.62
VPS25-203ENST00000589520 PTENP60484 403 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 PCBP1Q15365 356 aaKnown RBP eCLIP11.18□□□□□ -0.625e-8■■■■■ 37.3
VPS25-203ENST00000589520 DUSP28Q4G0W2 176 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 EFCAB12Q6NXP0 572 aa11.18□□□□□ -0.62
VPS25-203ENST00000589520 CRELD2Q6UXH1 353 aaPredicted RBP11.18□□□□□ -0.62
VPS25-203ENST00000589520 TRIM72Q6ZMU5 477 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms