RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 TGFB1I1O43294 461 aa21.35■■□□□ 1.01
CIRBP-220ENST00000588917 ATF7P17544 494 aaPredicted RBP21.35■■□□□ 1.01
CIRBP-220ENST00000588917 PRCPP42785 496 aa21.35■■□□□ 1.01
CIRBP-220ENST00000588917 MYBPC2Q14324 1141 aa21.35■■□□□ 1.01
CIRBP-220ENST00000588917 ISM2Q6H9L7 571 aa21.35■■□□□ 1.01
CIRBP-220ENST00000588917 AGMOQ6ZNB7 445 aa21.35■■□□□ 1.01
CIRBP-220ENST00000588917 C12orf56Q8IXR9 622 aa21.35■■□□□ 1.01
CIRBP-220ENST00000588917 URGCPQ8TCY9 931 aa21.35■■□□□ 1.01
CIRBP-220ENST00000588917 TMEM174Q8WUU8 243 aa21.35■■□□□ 1.01
CIRBP-220ENST00000588917 ZNF689Q96CS4 500 aaPredicted RBP21.35■■□□□ 1.01
CIRBP-220ENST00000588917 MRPL9Q9BYD2 267 aaKnown RBP21.35■■□□□ 1.01
CIRBP-220ENST00000588917 NXF3Q9H4D5 531 aaKnown RBP21.35■■□□□ 1.01
CIRBP-220ENST00000588917 AGPAT3Q9NRZ7 376 aa21.35■■□□□ 1.01
CIRBP-220ENST00000588917 MAPK8IP1Q9UQF2 711 aa21.35■■□□□ 1.01
CIRBP-220ENST00000588917 TRAF3IP3Q9Y228 551 aa21.35■■□□□ 1.01
CIRBP-220ENST00000588917 VCANP13611 3396 aa21.35■■□□□ 1.01
CIRBP-220ENST00000588917 PSMA7O14818 248 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 OFD1O75665 1012 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 HARSP12081 509 aaKnown RBP21.34■■□□□ 1.01
CIRBP-220ENST00000588917 AKAP5P24588 427 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 ADSSP30520 456 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 RBM43Q6ZSC3 357 aaKnown RBP21.34■■□□□ 1.01
CIRBP-220ENST00000588917 CMTR2Q8IYT2 770 aaKnown RBP21.34■■□□□ 1.01
CIRBP-220ENST00000588917 ADSSL1Q8N142 457 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 MLKLQ8NB16 471 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 LPPQ93052 612 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 TSPAN18Q96SJ8 248 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 TSG101Q99816 390 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 APOL6Q9BWW8 343 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 RNF39Q9H2S5 420 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 KCTD10Q9H3F6 313 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 PLEKHA5Q9HAU0 1116 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 DACH1Q9UI36 760 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 HES2Q9Y543 173 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 MICAL3Q7RTP6 2002 aa21.34■■□□□ 1.01
CIRBP-220ENST00000588917 CARNS1A5YM72 827 aa21.33■■□□□ 1.01
CIRBP-220ENST00000588917 FGFR1P11362 822 aa21.33■■□□□ 1.01
CIRBP-220ENST00000588917 RPL13P26373 211 aaKnown RBP21.33■■□□□ 1.01
CIRBP-220ENST00000588917 BTG3Q14201 252 aaPredicted RBP21.33■■□□□ 1.01
CIRBP-220ENST00000588917 NFKBIBQ15653 356 aa21.33■■□□□ 1.01
CIRBP-220ENST00000588917 NFIL3Q16649 462 aa21.33■■□□□ 1.01
CIRBP-220ENST00000588917 NOMO2Q5JPE7 1267 aa21.33■■□□□ 1.01
CIRBP-220ENST00000588917 SASS6Q6UVJ0 657 aa21.33■■□□□ 1.01
CIRBP-220ENST00000588917 TMCO2Q7Z6W1 182 aaPredicted RBP21.33■■□□□ 1.01
CIRBP-220ENST00000588917 CD302Q8IX05 232 aa21.33■■□□□ 1.01
CIRBP-220ENST00000588917 FIBCD1Q8N539 461 aa21.33■■□□□ 1.01
CIRBP-220ENST00000588917 CASD1Q96PB1 797 aa21.33■■□□□ 1.01
CIRBP-220ENST00000588917 HAPLN2Q9GZV7 340 aa21.33■■□□□ 1.01
CIRBP-220ENST00000588917 RPF1Q9H9Y2 349 aaKnown RBP21.33■■□□□ 1.01
CIRBP-220ENST00000588917 TTC3P53804 2025 aa21.33■■□□□ 1
CIRBP-220ENST00000588917 ARL5CA6NH57 179 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 TBKBP1A7MCY6 615 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 RBAK-RBAKDNI3L0D1 243 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 INPPL1O15357 1258 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 EXTL3O43909 919 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 NLRP12P59046 1061 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 OSTNP61366 133 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 CT47A1Q5JQC4 288 aaPredicted RBP21.32■■□□□ 1
CIRBP-220ENST00000588917 CLLU1OSQ5K130 101 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 CENPPQ6IPU0 288 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 CAVIN1Q6NZI2 390 aaKnown RBP21.32■■□□□ 1
CIRBP-220ENST00000588917 SLC9A9Q8IVB4 645 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 SMYD4Q8IYR2 804 aaPredicted RBP21.32■■□□□ 1
CIRBP-220ENST00000588917 GPD1LQ8N335 351 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 HELQQ8TDG4 1101 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 RPS6KC1Q96S38 1066 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 PBX4Q9BYU1 374 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 IKZF4Q9H2S9 585 aa21.32■■□□□ 1
CIRBP-220ENST00000588917 CPSF3Q9UKF6 684 aaKnown RBP21.32■■□□□ 1
CIRBP-220ENST00000588917 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.32■■□□□ 1
CIRBP-220ENST00000588917 BICDL2A1A5D9 508 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 ZNF233A6NK53 670 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 GRXCR1A8MXD5 290 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 TISP43B9A030 160 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 RECQL4O94761 1208 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 RABGGTBP53611 331 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 LRRC63Q05C16 580 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 EDRF1Q3B7T1 1238 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 FOXR2Q6PJQ5 311 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 CEP120Q8N960 986 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 XXYLT1Q8NBI6 393 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 SP7Q8TDD2 431 aaPredicted RBP21.31■■□□□ 1
CIRBP-220ENST00000588917 GAD1Q99259 594 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 CBWD1Q9BRT8 395 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 PCIF1Q9H4Z3 704 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 RC3H2Q9HBD1 1191 aaKnown RBP21.31■■□□□ 1
CIRBP-220ENST00000588917 RNF19AQ9NV58 838 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 HSPBP1Q9NZL4 362 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 TMEM63CQ9P1W3 806 aa21.31■■□□□ 1
CIRBP-220ENST00000588917 MEIS3P2A8K0S8 358 aa21.3■■□□□ 1
CIRBP-220ENST00000588917 PPP1R3GB7ZBB8 358 aa21.3■■□□□ 1
CIRBP-220ENST00000588917 CLIC2O15247 247 aa21.3■■□□□ 1
CIRBP-220ENST00000588917 FAM189A1O60320 539 aa21.3■■□□□ 1
CIRBP-220ENST00000588917 BMP6P22004 513 aa21.3■■□□□ 1
CIRBP-220ENST00000588917 CCNE1P24864 410 aa21.3■■□□□ 1
CIRBP-220ENST00000588917 PBX2P40425 430 aa21.3■■□□□ 1
CIRBP-220ENST00000588917 ACOT2P49753 483 aa21.3■■□□□ 1
CIRBP-220ENST00000588917 RNASELQ05823 741 aaKnown RBP21.3■■□□□ 1
CIRBP-220ENST00000588917 SURF1Q15526 300 aa21.3■■□□□ 1
CIRBP-220ENST00000588917 ALKAL1Q6UXT8 129 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms